Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400045928
CDS Infomation

pacid=37465468 polypeptide=PGSC0003DMP400031121 locus=PGSC0003DMG400017809 ID=PGSC0003DMT400045928.v4.03 annot-version=v4.03
Sequence

ATGGGCACCCTATCTCCCAAGCTAGCCACAGGCATTCTCCATTTCCCGTCTCACCCCCAC
CACCGTAAACTGCCTTCACTCCTCCCTGTCAATTTCAATTCATCAACAGGCAACAGTTTT
GGTTGTAGTAGATGTAGCAATGTTAAGGTGAATAAGGTAAAATGCAAGGCTACTGAGCTT
TCAGTTGCGGAAGGGTCATCGGCGGCCAATTGGGTGCCTGTGGTTCCTCTGTCAGCACTG
CCAAAAGGAGAGAGACGTGTTATTATACAAGATGGGGAAACTATACTCCTGCTTTGGTAT
AAAGATGATGTTTTTGCTATTGAAAATCGTTCACCTGCTGAAGGTGCTTATAGTGAAGGA
CTTCTTAATGCTAAGCTCACTCAGGATGGATGTATCGTGTGTCCTACAACAGATAGCACA
TTTTATCTGCAAAATGGAGCCATCAAAGAATGGTATCCGAATAATCCTGTGCTGAGAGTC
CTTACTCCCGCCTTGAGAAATTTGTTTGTTTATCCTGTTAAAACCGACGATGAGAATATC
TACATCAGCATGAGAGGTGGAAAAGTTGATGCATCTGCAGAGATTGTTTTCAGTGGAAAG
GCTCAACCTGGTGTAACAGCAACTGACGTGAATGTAGACGAGGTAAGAATGGTTATCGAC
GAGGGTCAAGAGGCCTTTGGGTTCACGGGAAGGAATGAACTGATAAATGGAAAAGCAGCA
GTAATTGGTTTCCTGTTGCTGCTGGATTTTGAACTCTTGACCGGCAAAGGTCTTCTCAAA
GGAACAGGGTTCTTGGACTTCATTTACTCAGTTTCAGATGCTTTCAAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400031121
PEP Infomation

pacid=37465468 transcript=PGSC0003DMT400045928 locus=PGSC0003DMG400017809 ID=PGSC0003DMT400045928.v4.03 annot-version=v4.03
Sequence

MGTLSPKLATGILHFPSHPHHRKLPSLLPVNFNSSTGNSFGCSRCSNVKVNKVKCKATEL
SVAEGSSAANWVPVVPLSALPKGERRVIIQDGETILLLWYKDDVFAIENRSPAEGAYSEG
LLNAKLTQDGCIVCPTTDSTFYLQNGAIKEWYPNNPVLRVLTPALRNLFVYPVKTDDENI
YISMRGGKVDASAEIVFSGKAQPGVTATDVNVDEVRMVIDEGQEAFGFTGRNELINGKAA
VIGFLLLLDFELLTGKGLLKGTGFLDFIYSVSDAFK*

Transcript Sequence

Transcript ID

PGSC0003DMT400045928
Transcript Infomation

pacid=37465468 locus=PGSC0003DMG400017809 ID=PGSC0003DMT400045928.v4.03 annot-version=v4.03
Sequence

ATGGGCACCCTATCTCCCAAGCTAGCCACAGGCATTCTCCATTTCCCGTCTCACCCCCAC
CACCGTAAACTGCCTTCACTCCTCCCTGTCAATTTCAATTCATCAACAGGCAACAGTTTT
GGTTGTAGTAGATGTAGCAATGTTAAGGTGAATAAGGTAAAATGCAAGGCTACTGAGCTT
TCAGTTGCGGAAGGGTCATCGGCGGCCAATTGGGTGCCTGTGGTTCCTCTGTCAGCACTG
CCAAAAGGAGAGAGACGTGTTATTATACAAGATGGGGAAACTATACTCCTGCTTTGGTAT
AAAGATGATGTTTTTGCTATTGAAAATCGTTCACCTGCTGAAGGTGCTTATAGTGAAGGA
CTTCTTAATGCTAAGCTCACTCAGGATGGATGTATCGTGTGTCCTACAACAGATAGCACA
TTTTATCTGCAAAATGGAGCCATCAAAGAATGGTATCCGAATAATCCTGTGCTGAGAGTC
CTTACTCCCGCCTTGAGAAATTTGTTTGTTTATCCTGTTAAAACCGACGATGAGAATATC
TACATCAGCATGAGAGGTGGAAAAGTTGATGCATCTGCAGAGATTGTTTTCAGTGGAAAG
GCTCAACCTGGTGTAACAGCAACTGACGTGAATGTAGACGAGGTAAGAATGGTTATCGAC
GAGGGTCAAGAGGCCTTTGGGTTCACGGGAAGGAATGAACTGATAAATGGAAAAGCAGCA
GTAATTGGTTTCCTGTTGCTGCTGGATTTTGAACTCTTGACCGGCAAAGGTCTTCTCAAA
GGAACAGGGTTCTTGGACTTCATTTACTCAGTTTCAGATGCTTTCAAATGA