Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400045867
CDS Infomation

pacid=37427450 polypeptide=PGSC0003DMP400031084 locus=PGSC0003DMG400017793 ID=PGSC0003DMT400045867.v4.03 annot-version=v4.03
Sequence

ATGGATTCTATCAAAATTTTGTCTCTGTTGAAATCATCTTTAACATCAGTGAAACGAGGG
AAACTGTTGCACCAGAAGATTGTTACTTTAGGGTTACAAAGCAACATTAACTTATCCAAG
AATCTAATTAATTTATACACGTCTTGCGAAGATTTCCATTCCGCTAAATTGGTTTTTCAA
AATCTTGAGAACCCTCTTGATATCACTTTGTGGAATGGTCTCATTGCTTCTTATACTAAG
AACCAATTGTTCAATGAAGCTCTTGACCTCTTTGACAAGCTGTTGCAATTCCCATATCTT
AAACCTGATAGTTACACCTTTCCTAGTGTACTCAAGGCTTGTAGTGGTTTAGGAAATGTC
CGATATGGTCAAATGATACATGCTCATTTGATTAAAACTGGGCTTTTATCAGATGTTGTT
GTGACAAGTTCAGTGATTGGTGTGTATGCCAAATGTGACTTGTTCGCTTCTGCTATACAA
CTGTTTGATGAAATGCCTGAAAGAGACATTCCGTGTTGGAATACTGTCATTTCGTGCTAC
TATCAAAATGGGCAATTTCATAAAGCCCTTCAATTCTTTGACAAGATGAAAGATTTGAGA
TATATGCCTAATTCGGTTACCTACACAGCTGCAATCTCATCATGTGGGAGGCTTTTAGAT
ATTGAAAGAGGGGAGACAATTCATCGGGAATTAGTAAATAATAAGTTTCTGTTGGATGGT
TTTGTAAGTGCTGCTCTTGTCGACATGTATGGGAAATGTGGCCTCTTAGAGAAGGCTAAA
GAAATTTTTGAGCAAATCCCTGCCAAGAGTTTGGTTTCTTGGAACTCCATGATATCTGGG
TACAGCTTGAGAGGTGATAGCAAATCATGCATTCAGCTTTTACAAAGGATGAACAAAGAA
AACATGAAACCCTCTTCTGTGACTTTAAGTAGCTTATTAATGGCGTGCTCTAAATCTGCT
CAACTGCAGCACGGGAAGTTTTTTCATGCATATATAATTCGAAATAACATACTATCTGAT
GACTTTCTTAATGCTTCACTTGTTGACTTATATTTCAAATGTGGCAGAGTTGAGACTGCG
CAAAACATCTTCAGTAAGATGGCAAAGAACAATGTGGAAGCATGGAATGTAATGATCTCT
GGACATGTGTCAGCTGGCTACTACTTGGAGGCACTTGCCCTTTATAATGACATGAAATTG
GCAGGGATAAAGCCTGATGCAATCACTTTGACTAGTGCCTTGGTATCTTGTTCACAGTTG
GCAGCCTTAGACCATGGCAAGGAGATCCACAAGTGTATCATTGATAATAAGTTGGAATCC
AATGAAATTGTTATGGGATCGCTGCTTGATATGTATGCTAAATGTGGTGCAGTAAGTGAA
GCTTTTAAAGTCTTTGATGAGTTGCCTGAGAGAGATCTGGTATCATGGACTACAATGATT
GCAGCATATGGATCTCATGGCCAAGCTTTTGAAGCGCTTAAACTCTTTAATGAAATGCTG
CATTCTAATGTAAAACCCGATAGAGTTGCATTCCTCGCAGTAATTTCTGCATGTGCTCAT
GGAGGATTAGTGGATGAAGGTTACCAGTATTTTAATTTAATGGTCAGTGGCGATGGCATT
CAACCGTCAGCTGAAGAGTACTCATGTCTAATTGACCTTCTTGGACGTGCTGGAAGATTG
CGTGAAGCCTATGCAATTCTGCAGAGCAACCCGGACACCAGGGAGGGTGTTGAGTTGTTA
AGCGCATTAGTTTCTGCATGCCATTTGCATGGGGAGTTAGAGATTGGAGAAGAAATTGCA
AAGATGCTTACTCAAAAGGATGAAGATGATCCATCCACTTATGTTATTTTAGCAAAAATA
TATGCTTCGCAGAACAAATGGAATGAGGTACGCAAGTTGAGACTGAAGATGAAGGAGCTG
GGGTTGAGGAAGAAACCTGGATGTAGTTGGATTGAAGTAGACAAGAGGATTCAAACATTC
CTGGCAGATGATAAATCATTCCTGCTAGTAGACGATGTTTATCAATGTCTATCTTTAATA
AATAGTGACATGGAAACCTATGAATGCTTAAACATTGATAGCAAGGGAGATGGATACTAC
TCAAAGCCAACAACTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400031084
PEP Infomation

pacid=37427450 transcript=PGSC0003DMT400045867 locus=PGSC0003DMG400017793 ID=PGSC0003DMT400045867.v4.03 annot-version=v4.03
Sequence

MDSIKILSLLKSSLTSVKRGKLLHQKIVTLGLQSNINLSKNLINLYTSCEDFHSAKLVFQ
NLENPLDITLWNGLIASYTKNQLFNEALDLFDKLLQFPYLKPDSYTFPSVLKACSGLGNV
RYGQMIHAHLIKTGLLSDVVVTSSVIGVYAKCDLFASAIQLFDEMPERDIPCWNTVISCY
YQNGQFHKALQFFDKMKDLRYMPNSVTYTAAISSCGRLLDIERGETIHRELVNNKFLLDG
FVSAALVDMYGKCGLLEKAKEIFEQIPAKSLVSWNSMISGYSLRGDSKSCIQLLQRMNKE
NMKPSSVTLSSLLMACSKSAQLQHGKFFHAYIIRNNILSDDFLNASLVDLYFKCGRVETA
QNIFSKMAKNNVEAWNVMISGHVSAGYYLEALALYNDMKLAGIKPDAITLTSALVSCSQL
AALDHGKEIHKCIIDNKLESNEIVMGSLLDMYAKCGAVSEAFKVFDELPERDLVSWTTMI
AAYGSHGQAFEALKLFNEMLHSNVKPDRVAFLAVISACAHGGLVDEGYQYFNLMVSGDGI
QPSAEEYSCLIDLLGRAGRLREAYAILQSNPDTREGVELLSALVSACHLHGELEIGEEIA
KMLTQKDEDDPSTYVILAKIYASQNKWNEVRKLRLKMKELGLRKKPGCSWIEVDKRIQTF
LADDKSFLLVDDVYQCLSLINSDMETYECLNIDSKGDGYYSKPTT*

Transcript Sequence

Transcript ID

PGSC0003DMT400045867
Transcript Infomation

pacid=37427450 locus=PGSC0003DMG400017793 ID=PGSC0003DMT400045867.v4.03 annot-version=v4.03
Sequence

ATGGATTCTATCAAAATTTTGTCTCTGTTGAAATCATCTTTAACATCAGTGAAACGAGGG
AAACTGTTGCACCAGAAGATTGTTACTTTAGGGTTACAAAGCAACATTAACTTATCCAAG
AATCTAATTAATTTATACACGTCTTGCGAAGATTTCCATTCCGCTAAATTGGTTTTTCAA
AATCTTGAGAACCCTCTTGATATCACTTTGTGGAATGGTCTCATTGCTTCTTATACTAAG
AACCAATTGTTCAATGAAGCTCTTGACCTCTTTGACAAGCTGTTGCAATTCCCATATCTT
AAACCTGATAGTTACACCTTTCCTAGTGTACTCAAGGCTTGTAGTGGTTTAGGAAATGTC
CGATATGGTCAAATGATACATGCTCATTTGATTAAAACTGGGCTTTTATCAGATGTTGTT
GTGACAAGTTCAGTGATTGGTGTGTATGCCAAATGTGACTTGTTCGCTTCTGCTATACAA
CTGTTTGATGAAATGCCTGAAAGAGACATTCCGTGTTGGAATACTGTCATTTCGTGCTAC
TATCAAAATGGGCAATTTCATAAAGCCCTTCAATTCTTTGACAAGATGAAAGATTTGAGA
TATATGCCTAATTCGGTTACCTACACAGCTGCAATCTCATCATGTGGGAGGCTTTTAGAT
ATTGAAAGAGGGGAGACAATTCATCGGGAATTAGTAAATAATAAGTTTCTGTTGGATGGT
TTTGTAAGTGCTGCTCTTGTCGACATGTATGGGAAATGTGGCCTCTTAGAGAAGGCTAAA
GAAATTTTTGAGCAAATCCCTGCCAAGAGTTTGGTTTCTTGGAACTCCATGATATCTGGG
TACAGCTTGAGAGGTGATAGCAAATCATGCATTCAGCTTTTACAAAGGATGAACAAAGAA
AACATGAAACCCTCTTCTGTGACTTTAAGTAGCTTATTAATGGCGTGCTCTAAATCTGCT
CAACTGCAGCACGGGAAGTTTTTTCATGCATATATAATTCGAAATAACATACTATCTGAT
GACTTTCTTAATGCTTCACTTGTTGACTTATATTTCAAATGTGGCAGAGTTGAGACTGCG
CAAAACATCTTCAGTAAGATGGCAAAGAACAATGTGGAAGCATGGAATGTAATGATCTCT
GGACATGTGTCAGCTGGCTACTACTTGGAGGCACTTGCCCTTTATAATGACATGAAATTG
GCAGGGATAAAGCCTGATGCAATCACTTTGACTAGTGCCTTGGTATCTTGTTCACAGTTG
GCAGCCTTAGACCATGGCAAGGAGATCCACAAGTGTATCATTGATAATAAGTTGGAATCC
AATGAAATTGTTATGGGATCGCTGCTTGATATGTATGCTAAATGTGGTGCAGTAAGTGAA
GCTTTTAAAGTCTTTGATGAGTTGCCTGAGAGAGATCTGGTATCATGGACTACAATGATT
GCAGCATATGGATCTCATGGCCAAGCTTTTGAAGCGCTTAAACTCTTTAATGAAATGCTG
CATTCTAATGTAAAACCCGATAGAGTTGCATTCCTCGCAGTAATTTCTGCATGTGCTCAT
GGAGGATTAGTGGATGAAGGTTACCAGTATTTTAATTTAATGGTCAGTGGCGATGGCATT
CAACCGTCAGCTGAAGAGTACTCATGTCTAATTGACCTTCTTGGACGTGCTGGAAGATTG
CGTGAAGCCTATGCAATTCTGCAGAGCAACCCGGACACCAGGGAGGGTGTTGAGTTGTTA
AGCGCATTAGTTTCTGCATGCCATTTGCATGGGGAGTTAGAGATTGGAGAAGAAATTGCA
AAGATGCTTACTCAAAAGGATGAAGATGATCCATCCACTTATGTTATTTTAGCAAAAATA
TATGCTTCGCAGAACAAATGGAATGAGGTACGCAAGTTGAGACTGAAGATGAAGGAGCTG
GGGTTGAGGAAGAAACCTGGATGTAGTTGGATTGAAGTAGACAAGAGGATTCAAACATTC
CTGGCAGATGATAAATCATTCCTGCTAGTAGACGATGTTTATCAATGTCTATCTTTAATA
AATAGTGACATGGAAACCTATGAATGCTTAAACATTGATAGCAAGGGAGATGGATACTAC
TCAAAGCCAACAACTTGA