Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400045839
CDS Infomation

pacid=37463851 polypeptide=PGSC0003DMP400031067 locus=PGSC0003DMG400017779 ID=PGSC0003DMT400045839.v4.03 annot-version=v4.03
Sequence

ATGGAAGATTCTTCTCCTTCTCCTTCAAATTCTTCTTCTTCTTCGCCCCCTCTTGACTCT
TCTCCCCCTCCTTCTCCTCCTGAATCTTCTCCACCACCGCCAAAATCTGACTCTTCTTCA
CCTCCACCACCAAAATCTGACTCTTCTTCACCTTCACCTCCACCATCGAAATCTGACTCT
CCTTCACCACCACCCCCTGAATCATCACCACCACCGAAATCTGATTCATCTCCTCCTCCT
CCATCCCCTAATCAATCACCCCCACCAAAATCCGAATCATCTCCTCCTCCTGCATCACCA
CCTCCTACAGAATCTTCTCCTCCTCCTCCATCATCTACAAATTTTTCTCCTCCATCGCCG
AAATCATCTGATTCTTCTCCTTCTGATGACAATGACAACCCTAATACACAATCACCACCA
CCCTCCTTGAACTCTTCATCATCATCCCCACCACCAACCACGAACACCAAACCCTCTCCT
TCCAAAAATACCTTCTTTAACGAACCTAATTCTCCTCCATCATCTACATTCTCTCCACCC
ACTCCAGAATCATCTCTATTTCCATCTGAAAAGGCGTTACCTACTTTTCCACCTTCACGA
GATAATGCATCATCGAATAAATCACCTGGTAATTCCTTAGGAAGCAATAACTCGCCACCA
CATGAACAATCATCTTCCTCAACTGTCGCAATAGTAGCTGCAGTATCTGTGACAGGTCTA
TTAATTTTGGCCGTTGTCATTGTCTGCCTATTATGTAATAGAAAGAAGAAGAAACAACCA
TACTATGTCGATCCTGCACATCCACCAAAAGGTGGTGATCCTTACTACAATACGGGCAAT
TATTCTAGTCCTCATACGGATCACATTGTTACATTAGCTCCACCACCAGGTGTAATGGGA
ACTCCTCAAGAAGGGGGTCGCGGGTGGACCCCGCCACCCCCTCCTCCAGCCGCGAATACG
AGCAGTGAATTTAGCTCAGGTTATTCAAGCCATGTACCTGGAGGAGGGCCAGCTACAATA
CCATCTCCTAATTATGGTGGACTATCAAAAATTCAATTCACTTATGCTGACTTGGCAACC
GCCACGGGTGGATTTTCGGAAGCAAATGTGTTGGGTCAAGGAGGGTTCGGATTCGTGCAT
AAAGGTGTTTTGACAGATGGAAGTGTAGTCGCGGTTAAGAGTTTGAAGTCCGGGAGCGGA
CAAGGAGAGAGAGAGTTTCAAGCTGAAGTAGAGATTATTAGTAGAGTTCATCATAGACAT
CTTGTTTCACTTGTGGGATATTGCATTGCTGATGGACAACGTATGTTGGTATATGAATTT
GTTTCAAATGGAACTTTGGAGTATCACCTTCATGGTAAAGGTCGACCTGTTATGGACTGG
GGCCTTAGGCTTAAAATTGCTTTGGGATCAGCCAAGGGATTGGCTTACCTCCATGAAGAT
TGTCATCCTCGAATTATCCATCGTGACATCAAGGGTGCAAACATTTTACTTGATAACAAT
TATGAAGCCATGGTGGCTGATTTTGGATTAGCTAAACTTACCGAAGACAATAATACTCAT
GTCTCCACTCGTGTTATGGGAACTTTTGGGTACTTAGCTCCAGAATATGCATCAAGTGGA
AAATTATCAGAAAAGTCAGATGTATTTTCATTTGGAGTTATGTTATTGGAACTTATAACT
GGAAGAAGACCTTTGGATACTACCAATAAACTCATGGATGACAGTCTAGTAGATTGGGCT
AGACCTTTCCTTACGAAAGCACTAGAAGAGAATAATTACGATGAGTTGGTAGACCCGCGA
CTAGAAGGAAACTATGATCCCGATGAGCTACAAAGGATGGTAGCTTGTGCTGCTGCTAGC
GTGCGCCATTCTGCTAGAAGACGTCCTAAAATGAGCCAGATTTTACGTGCCTTGGATGGC
GATTCATCTTTGGAGGACTTAAATGAAAAAGCTGGCAAGAACAACACGGCTAATTTTGGC
GGTGCAAGTGGGCCCGCCTCGGATCTCTACGACACATGTGCATACAATGCTGACATGGTG
AAATTTAGGCAAATGGTGATGACAAGTCAAGATATGAATAGTAGTGAATATGGTAACACA
AGTGATTATGGACTCCATCCTTCTGACACTAGCAGTGAATTCAGCAGTGATTATAATCAT
TCTGGAGCACACAAGCAAGCAAAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400031067
PEP Infomation

pacid=37463851 transcript=PGSC0003DMT400045839 locus=PGSC0003DMG400017779 ID=PGSC0003DMT400045839.v4.03 annot-version=v4.03
Sequence

MEDSSPSPSNSSSSSPPLDSSPPPSPPESSPPPPKSDSSSPPPPKSDSSSPSPPPSKSDS
PSPPPPESSPPPKSDSSPPPPSPNQSPPPKSESSPPPASPPPTESSPPPPSSTNFSPPSP
KSSDSSPSDDNDNPNTQSPPPSLNSSSSSPPPTTNTKPSPSKNTFFNEPNSPPSSTFSPP
TPESSLFPSEKALPTFPPSRDNASSNKSPGNSLGSNNSPPHEQSSSSTVAIVAAVSVTGL
LILAVVIVCLLCNRKKKKQPYYVDPAHPPKGGDPYYNTGNYSSPHTDHIVTLAPPPGVMG
TPQEGGRGWTPPPPPPAANTSSEFSSGYSSHVPGGGPATIPSPNYGGLSKIQFTYADLAT
ATGGFSEANVLGQGGFGFVHKGVLTDGSVVAVKSLKSGSGQGEREFQAEVEIISRVHHRH
LVSLVGYCIADGQRMLVYEFVSNGTLEYHLHGKGRPVMDWGLRLKIALGSAKGLAYLHED
CHPRIIHRDIKGANILLDNNYEAMVADFGLAKLTEDNNTHVSTRVMGTFGYLAPEYASSG
KLSEKSDVFSFGVMLLELITGRRPLDTTNKLMDDSLVDWARPFLTKALEENNYDELVDPR
LEGNYDPDELQRMVACAAASVRHSARRRPKMSQILRALDGDSSLEDLNEKAGKNNTANFG
GASGPASDLYDTCAYNADMVKFRQMVMTSQDMNSSEYGNTSDYGLHPSDTSSEFSSDYNH
SGAHKQAK*

Transcript Sequence

Transcript ID

PGSC0003DMT400045839
Transcript Infomation

pacid=37463851 locus=PGSC0003DMG400017779 ID=PGSC0003DMT400045839.v4.03 annot-version=v4.03
Sequence

ATGGAAGATTCTTCTCCTTCTCCTTCAAATTCTTCTTCTTCTTCGCCCCCTCTTGACTCT
TCTCCCCCTCCTTCTCCTCCTGAATCTTCTCCACCACCGCCAAAATCTGACTCTTCTTCA
CCTCCACCACCAAAATCTGACTCTTCTTCACCTTCACCTCCACCATCGAAATCTGACTCT
CCTTCACCACCACCCCCTGAATCATCACCACCACCGAAATCTGATTCATCTCCTCCTCCT
CCATCCCCTAATCAATCACCCCCACCAAAATCCGAATCATCTCCTCCTCCTGCATCACCA
CCTCCTACAGAATCTTCTCCTCCTCCTCCATCATCTACAAATTTTTCTCCTCCATCGCCG
AAATCATCTGATTCTTCTCCTTCTGATGACAATGACAACCCTAATACACAATCACCACCA
CCCTCCTTGAACTCTTCATCATCATCCCCACCACCAACCACGAACACCAAACCCTCTCCT
TCCAAAAATACCTTCTTTAACGAACCTAATTCTCCTCCATCATCTACATTCTCTCCACCC
ACTCCAGAATCATCTCTATTTCCATCTGAAAAGGCGTTACCTACTTTTCCACCTTCACGA
GATAATGCATCATCGAATAAATCACCTGGTAATTCCTTAGGAAGCAATAACTCGCCACCA
CATGAACAATCATCTTCCTCAACTGTCGCAATAGTAGCTGCAGTATCTGTGACAGGTCTA
TTAATTTTGGCCGTTGTCATTGTCTGCCTATTATGTAATAGAAAGAAGAAGAAACAACCA
TACTATGTCGATCCTGCACATCCACCAAAAGGTGGTGATCCTTACTACAATACGGGCAAT
TATTCTAGTCCTCATACGGATCACATTGTTACATTAGCTCCACCACCAGGTGTAATGGGA
ACTCCTCAAGAAGGGGGTCGCGGGTGGACCCCGCCACCCCCTCCTCCAGCCGCGAATACG
AGCAGTGAATTTAGCTCAGGTTATTCAAGCCATGTACCTGGAGGAGGGCCAGCTACAATA
CCATCTCCTAATTATGGTGGACTATCAAAAATTCAATTCACTTATGCTGACTTGGCAACC
GCCACGGGTGGATTTTCGGAAGCAAATGTGTTGGGTCAAGGAGGGTTCGGATTCGTGCAT
AAAGGTGTTTTGACAGATGGAAGTGTAGTCGCGGTTAAGAGTTTGAAGTCCGGGAGCGGA
CAAGGAGAGAGAGAGTTTCAAGCTGAAGTAGAGATTATTAGTAGAGTTCATCATAGACAT
CTTGTTTCACTTGTGGGATATTGCATTGCTGATGGACAACGTATGTTGGTATATGAATTT
GTTTCAAATGGAACTTTGGAGTATCACCTTCATGGTAAAGGTCGACCTGTTATGGACTGG
GGCCTTAGGCTTAAAATTGCTTTGGGATCAGCCAAGGGATTGGCTTACCTCCATGAAGAT
TGTCATCCTCGAATTATCCATCGTGACATCAAGGGTGCAAACATTTTACTTGATAACAAT
TATGAAGCCATGGTGGCTGATTTTGGATTAGCTAAACTTACCGAAGACAATAATACTCAT
GTCTCCACTCGTGTTATGGGAACTTTTGGGTACTTAGCTCCAGAATATGCATCAAGTGGA
AAATTATCAGAAAAGTCAGATGTATTTTCATTTGGAGTTATGTTATTGGAACTTATAACT
GGAAGAAGACCTTTGGATACTACCAATAAACTCATGGATGACAGTCTAGTAGATTGGGCT
AGACCTTTCCTTACGAAAGCACTAGAAGAGAATAATTACGATGAGTTGGTAGACCCGCGA
CTAGAAGGAAACTATGATCCCGATGAGCTACAAAGGATGGTAGCTTGTGCTGCTGCTAGC
GTGCGCCATTCTGCTAGAAGACGTCCTAAAATGAGCCAGATTTTACGTGCCTTGGATGGC
GATTCATCTTTGGAGGACTTAAATGAAAAAGCTGGCAAGAACAACACGGCTAATTTTGGC
GGTGCAAGTGGGCCCGCCTCGGATCTCTACGACACATGTGCATACAATGCTGACATGGTG
AAATTTAGGCAAATGGTGATGACAAGTCAAGATATGAATAGTAGTGAATATGGTAACACA
AGTGATTATGGACTCCATCCTTCTGACACTAGCAGTGAATTCAGCAGTGATTATAATCAT
TCTGGAGCACACAAGCAAGCAAAATGA