Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400045806
CDS Infomation

pacid=37447119 polypeptide=PGSC0003DMP400031043 locus=PGSC0003DMG400017761 ID=PGSC0003DMT400045806.v4.03 annot-version=v4.03
Sequence

ATGAGGCCAAGAATGCTATTTCCAACTTCAAACCAAACAACAAATTGCCATAATATTTGT
GACTCAACATGTCCTTATGGATGCTATCCATACCCTAATATGAACTATTACATGTCAGCA
CCACCACCAGCACCAATCGAATCGAGCAACAAAGTTGTTCAAAACATTTTACCTTATATT
ATTATATCCATCGCGTTATTTGTTAGCTTGTTCCTACTCGTTAGCTACTACATAATCATC
GTAAGAAATTGCTCGAATTGGAATCGTAGAAGAACGAGAGGAGAAGGCGATAACGATGAG
TTGATTATTGATCATCCAATTTGGTACATCAATACTATGGGAATTGAGGCTTGTTTAATC
AATTTGATTACAATTTTCAAGTACAAAACAGGGGATGGTTTAATTGATGGAACAGAGTGC
TCTGTTTGTTTGAATGAATTTCAAGATGATGAGTCACTTAAGTTGTTACCTAAATGTAAC
CATGCCTTTCACATCGATTGTATCGATATGTGGCTTAGATCACACGTTAATTGCCCGTTG
TGTCGTGCTCCTATCATCTCCAACACTGTTGTTGCACCCGTGGGATCATCAATAATCGTT
CCCATATCGAGTACTAATAATGATATTGGTTCACAAAGAGATGTTGTTATTGTAGAAATG
AACGACAACAATGAGGCTAGAGAAGGGGAATTTCAAGAAAACGATGATCATGATGAACGT
CCTGAAACATCGAAAAAAGATGTTGAAATATTACAAAAAATGCGAAGGTCAGTATCTATG
GATTCTTCAATTGCTACAAATATAGGACTACAAAGTGAAAAAAGATGTGTTGAGACAAAA
AGGAATGAGGGAACAAGTTCAAATTCAAGAATCCAAAGGGTCATGGACAGTGCTTCTTCA
ATGAAGAGATCATTTTCTTATGGTGGGAGGTCATTTTTTTCGAAAAGTAAGAGAAATGAG
TCGTGCTCGGAGCTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400031043
PEP Infomation

pacid=37447119 transcript=PGSC0003DMT400045806 locus=PGSC0003DMG400017761 ID=PGSC0003DMT400045806.v4.03 annot-version=v4.03
Sequence

MRPRMLFPTSNQTTNCHNICDSTCPYGCYPYPNMNYYMSAPPPAPIESSNKVVQNILPYI
IISIALFVSLFLLVSYYIIIVRNCSNWNRRRTRGEGDNDELIIDHPIWYINTMGIEACLI
NLITIFKYKTGDGLIDGTECSVCLNEFQDDESLKLLPKCNHAFHIDCIDMWLRSHVNCPL
CRAPIISNTVVAPVGSSIIVPISSTNNDIGSQRDVVIVEMNDNNEAREGEFQENDDHDER
PETSKKDVEILQKMRRSVSMDSSIATNIGLQSEKRCVETKRNEGTSSNSRIQRVMDSASS
MKRSFSYGGRSFFSKSKRNESCSEL*

Transcript Sequence

Transcript ID

PGSC0003DMT400045806
Transcript Infomation

pacid=37447119 locus=PGSC0003DMG400017761 ID=PGSC0003DMT400045806.v4.03 annot-version=v4.03
Sequence

ATGAGGCCAAGAATGCTATTTCCAACTTCAAACCAAACAACAAATTGCCATAATATTTGT
GACTCAACATGTCCTTATGGATGCTATCCATACCCTAATATGAACTATTACATGTCAGCA
CCACCACCAGCACCAATCGAATCGAGCAACAAAGTTGTTCAAAACATTTTACCTTATATT
ATTATATCCATCGCGTTATTTGTTAGCTTGTTCCTACTCGTTAGCTACTACATAATCATC
GTAAGAAATTGCTCGAATTGGAATCGTAGAAGAACGAGAGGAGAAGGCGATAACGATGAG
TTGATTATTGATCATCCAATTTGGTACATCAATACTATGGGAATTGAGGCTTGTTTAATC
AATTTGATTACAATTTTCAAGTACAAAACAGGGGATGGTTTAATTGATGGAACAGAGTGC
TCTGTTTGTTTGAATGAATTTCAAGATGATGAGTCACTTAAGTTGTTACCTAAATGTAAC
CATGCCTTTCACATCGATTGTATCGATATGTGGCTTAGATCACACGTTAATTGCCCGTTG
TGTCGTGCTCCTATCATCTCCAACACTGTTGTTGCACCCGTGGGATCATCAATAATCGTT
CCCATATCGAGTACTAATAATGATATTGGTTCACAAAGAGATGTTGTTATTGTAGAAATG
AACGACAACAATGAGGCTAGAGAAGGGGAATTTCAAGAAAACGATGATCATGATGAACGT
CCTGAAACATCGAAAAAAGATGTTGAAATATTACAAAAAATGCGAAGGTCAGTATCTATG
GATTCTTCAATTGCTACAAATATAGGACTACAAAGTGAAAAAAGATGTGTTGAGACAAAA
AGGAATGAGGGAACAAGTTCAAATTCAAGAATCCAAAGGGTCATGGACAGTGCTTCTTCA
ATGAAGAGATCATTTTCTTATGGTGGGAGGTCATTTTTTTCGAAAAGTAAGAGAAATGAG
TCGTGCTCGGAGCTCTAA