Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400045740
CDS Infomation

pacid=37426386 polypeptide=PGSC0003DMP400030997 locus=PGSC0003DMG400017737 ID=PGSC0003DMT400045740.v4.03 annot-version=v4.03
Sequence

ATGAAAAGAGCAAAGGTAGTGTTCATTTCAACACCAGCACTTGGCAACATTGTTCCAATT
ATTGAGTTTGCTAAACTCTTCACTCAAAAAAACAAAAACTTTTCAGCCACCATACTCTTA
ATTAACATCCCTCAAAGACCACTTGTCCAATCATATATTGACTCTCTCACCACCACCACC
ACCACCAACGCCACCGGAAACATCCATTTCCTCTCCCTCCCCGTGGCAGATCCACCGTCC
CTCGATCAATTTGAGGCAACTATAGGTTTTTTATCACTATTAATTCAAAATCACACGTTA
CAAGTCAAAAATGCACTTATTGACCTTATTTCAGACTCAGACTTGGACTCAGGGCAAGTT
GTTGGATTCTTTATTGACATGTTTTGTACATCTTTTATTGATGTTGCTAAGGAACTAAAC
ATTCCATGTTATCTTTACTTTGCTTCCCCTGCTACTTTCTTGAGCTTCATGTTACATCTC
CCAATTTTAGATGCTCAAGTTAGTACTAATATTGAGTACAAAGATTCAGCCAATGATTTC
AACATTCTTGGCTTTTCCAATCCTGTCCCTATTAAATGTTTCCCTTCATTCATGCTAAAA
AGACATATAGATGGTTACTCTTGGTTCCTACATCATGCAAAAAGGTACAAAGAAACAAAG
GGTATTATTGTCAACACATTTCAAGAACTTGAACCTTTTTGCTTAAACTCATTAGTACAT
ACTACTAGTCATGTTGTACCACCAATTTATCCAATTGGACCAGTAGTGGATCATAATGGA
CCAGCTCAATGGCATCAAGATTCTTGGGGTCATGAAAATGTCATGAAATGGCTTGATAAT
CAAGAACCATCATCAGTAATTTTCTTGAGTTTTGGAAGTATGGGAAGTCTTAAAGATTCA
CAAGTGAAAGAAATAGCAAAAGGTTTGGAGAAAGCAGGACACCCTTTTTTGTGGGCAATT
AGAGAAGCACCAAAGGATAAAAGAGAACTTCCAAATGATTATACAAACTTAGAGGAAATT
TTACCTAATGGGTTTTTAGAATCAACAAAGGGGAAAGGGCTAGTGTGTGGGTTGGTCCCA
CAAGTTACAATCTTGGCCCATAAGGCTATTGGAGGATTTGTGTCACACTGTGGTTGGAAT
TCGATTCTTGAAAGTTTATATTATGGAGTGCCAATTGGTACTTGGCCAATATATGCAGAG
CAACACTTGAATGCATTTGAGTTGGTGAAAGAGTTGGATTTGGCTGTGGAAATCACAATG
GATTATAGAGATGGCACAACATTGGTTTCATCAGAGGAAGTGGCAAAAGGGGTTAAGAAA
ATAATGGATGGTGATGGTGAGGTGAGACAAAAGTTTAAGAAAATGAGTGAGAAATGCAAG
GATGTTTGGAAGGAAAATGGCTCATCTTCTAATTTTCTTGGACACTTGATTGATGAATTA
ATGGCTGTGATTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400030997
PEP Infomation

pacid=37426386 transcript=PGSC0003DMT400045740 locus=PGSC0003DMG400017737 ID=PGSC0003DMT400045740.v4.03 annot-version=v4.03
Sequence

MKRAKVVFISTPALGNIVPIIEFAKLFTQKNKNFSATILLINIPQRPLVQSYIDSLTTTT
TTNATGNIHFLSLPVADPPSLDQFEATIGFLSLLIQNHTLQVKNALIDLISDSDLDSGQV
VGFFIDMFCTSFIDVAKELNIPCYLYFASPATFLSFMLHLPILDAQVSTNIEYKDSANDF
NILGFSNPVPIKCFPSFMLKRHIDGYSWFLHHAKRYKETKGIIVNTFQELEPFCLNSLVH
TTSHVVPPIYPIGPVVDHNGPAQWHQDSWGHENVMKWLDNQEPSSVIFLSFGSMGSLKDS
QVKEIAKGLEKAGHPFLWAIREAPKDKRELPNDYTNLEEILPNGFLESTKGKGLVCGLVP
QVTILAHKAIGGFVSHCGWNSILESLYYGVPIGTWPIYAEQHLNAFELVKELDLAVEITM
DYRDGTTLVSSEEVAKGVKKIMDGDGEVRQKFKKMSEKCKDVWKENGSSSNFLGHLIDEL
MAVI*

Transcript Sequence

Transcript ID

PGSC0003DMT400045740
Transcript Infomation

pacid=37426386 locus=PGSC0003DMG400017737 ID=PGSC0003DMT400045740.v4.03 annot-version=v4.03
Sequence

ATGAAAAGAGCAAAGGTAGTGTTCATTTCAACACCAGCACTTGGCAACATTGTTCCAATT
ATTGAGTTTGCTAAACTCTTCACTCAAAAAAACAAAAACTTTTCAGCCACCATACTCTTA
ATTAACATCCCTCAAAGACCACTTGTCCAATCATATATTGACTCTCTCACCACCACCACC
ACCACCAACGCCACCGGAAACATCCATTTCCTCTCCCTCCCCGTGGCAGATCCACCGTCC
CTCGATCAATTTGAGGCAACTATAGGTTTTTTATCACTATTAATTCAAAATCACACGTTA
CAAGTCAAAAATGCACTTATTGACCTTATTTCAGACTCAGACTTGGACTCAGGGCAAGTT
GTTGGATTCTTTATTGACATGTTTTGTACATCTTTTATTGATGTTGCTAAGGAACTAAAC
ATTCCATGTTATCTTTACTTTGCTTCCCCTGCTACTTTCTTGAGCTTCATGTTACATCTC
CCAATTTTAGATGCTCAAGTTAGTACTAATATTGAGTACAAAGATTCAGCCAATGATTTC
AACATTCTTGGCTTTTCCAATCCTGTCCCTATTAAATGTTTCCCTTCATTCATGCTAAAA
AGACATATAGATGGTTACTCTTGGTTCCTACATCATGCAAAAAGGTACAAAGAAACAAAG
GGTATTATTGTCAACACATTTCAAGAACTTGAACCTTTTTGCTTAAACTCATTAGTACAT
ACTACTAGTCATGTTGTACCACCAATTTATCCAATTGGACCAGTAGTGGATCATAATGGA
CCAGCTCAATGGCATCAAGATTCTTGGGGTCATGAAAATGTCATGAAATGGCTTGATAAT
CAAGAACCATCATCAGTAATTTTCTTGAGTTTTGGAAGTATGGGAAGTCTTAAAGATTCA
CAAGTGAAAGAAATAGCAAAAGGTTTGGAGAAAGCAGGACACCCTTTTTTGTGGGCAATT
AGAGAAGCACCAAAGGATAAAAGAGAACTTCCAAATGATTATACAAACTTAGAGGAAATT
TTACCTAATGGGTTTTTAGAATCAACAAAGGGGAAAGGGCTAGTGTGTGGGTTGGTCCCA
CAAGTTACAATCTTGGCCCATAAGGCTATTGGAGGATTTGTGTCACACTGTGGTTGGAAT
TCGATTCTTGAAAGTTTATATTATGGAGTGCCAATTGGTACTTGGCCAATATATGCAGAG
CAACACTTGAATGCATTTGAGTTGGTGAAAGAGTTGGATTTGGCTGTGGAAATCACAATG
GATTATAGAGATGGCACAACATTGGTTTCATCAGAGGAAGTGGCAAAAGGGGTTAAGAAA
ATAATGGATGGTGATGGTGAGGTGAGACAAAAGTTTAAGAAAATGAGTGAGAAATGCAAG
GATGTTTGGAAGGAAAATGGCTCATCTTCTAATTTTCTTGGACACTTGATTGATGAATTA
ATGGCTGTGATTTGA