Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400045738
CDS Infomation

pacid=37428824 polypeptide=PGSC0003DMP400030995 locus=PGSC0003DMG400017735 ID=PGSC0003DMT400045738.v4.03 annot-version=v4.03
Sequence

ATGAAAGCTTTAAGAGTTTTGAGGACATTGAACTCATCACTATCTTCAAATCGGAGCAAA
ACCCATTTTAATTCAACCATTTTCCTTCGGTTTTACTCAGCCCAACCTCAAGAAGACCAC
CCCACAAGCACTGGTCTTTCTTCCTCTGAAGAAGATGACACGTCTTCCTCAGTCTTCGAC
AGTTCGCAATACGATGTTAGTGTGGGATTAAACAATGATGTTAATTCAGAAAGCAGTGTA
AGCTCCACTTGGGATGAGAAATATAGGGATAGAGTGAAAACTAAAGTCTTTGGTGAAGAC
CCTTCAGAGATTAAGAGTTCAAGAATCTTGATTAAAGAAGAGGAGAAGAGAAGAAGAGCT
GCTTTATTGGCTAGGACTCTTCTAGAATCTGCACTGGACCGGCCTGATGAGGAAGGGGAC
GAAGATAAAGAGGATGAGTTGGTGAAGGAAGAAGATCAAATGTCATTGAGTGTTGGAATT
ATTGGAGCTCCTAATGCTGGGAAATCTTCATTGACTAATTACATGGTTGGGACCAAAGTT
TCTGCTGTATCACGGAAGACAAATACCACTACTCATGAAGTCTTAGGTGTGATGACTAAA
GGGAAAACACAAATTTGTTTCTTTGACACTCCCGGGCTTATGCTAAAGAAAAGTGGATTT
CCTTACAAAGACATGAAAGCACGTATTGAAAGTGCATGGAGGTCTATTGATCTATATGAT
GTACTCATTGTTATATTTGATGCTCATAGGCATCTTACCAAACCTGATTCCCGAGTGGTG
AGGTTGATTGAGAGAATGGGCTCGGAGGCTAAGCCAAACCAGAAGCGCTTACTGTGTATC
AATAAAGTTGACCTAATCGAGAAAAAGAAAGACATGTTGAAAGTTGTTGAGGAATTCAAA
GACCTTCCTGGATATGAAAGGTGCTTTACGGTATCCGGACTAAAGGGTGCTGGAGTGAAA
GATCTAACAAAATACTTGATGGAGCAGTCAGTGAAAAGACCGTGGGATGAAGATCCATTT
GTCATGAGTGAAGAAGTTATGAAGAATATTTCAATGGAGGTTGTCAGGGAAAAGTTGCTA
CATTACATACATCAGGAAATCCCATATGGTATTGACCATCGCCTGATGGACTGGAAGGAG
TTACGTGATGGTTCCCTAAGAATTGAACAGCATTTGATCACACACAAGATAAGCCAACGC
AAGATTCTCGTAGGAAAGAATGGTTCCAAAATAGGGAGAATAGGTATCGAGGCAAATGAA
GAGTTGAGAACGATATTCAAGAGAAACGTCCATCTAATGCTTATGGTTAGAGTGAAATCA
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400030995
PEP Infomation

pacid=37428824 transcript=PGSC0003DMT400045738 locus=PGSC0003DMG400017735 ID=PGSC0003DMT400045738.v4.03 annot-version=v4.03
Sequence

MKALRVLRTLNSSLSSNRSKTHFNSTIFLRFYSAQPQEDHPTSTGLSSSEEDDTSSSVFD
SSQYDVSVGLNNDVNSESSVSSTWDEKYRDRVKTKVFGEDPSEIKSSRILIKEEEKRRRA
ALLARTLLESALDRPDEEGDEDKEDELVKEEDQMSLSVGIIGAPNAGKSSLTNYMVGTKV
SAVSRKTNTTTHEVLGVMTKGKTQICFFDTPGLMLKKSGFPYKDMKARIESAWRSIDLYD
VLIVIFDAHRHLTKPDSRVVRLIERMGSEAKPNQKRLLCINKVDLIEKKKDMLKVVEEFK
DLPGYERCFTVSGLKGAGVKDLTKYLMEQSVKRPWDEDPFVMSEEVMKNISMEVVREKLL
HYIHQEIPYGIDHRLMDWKELRDGSLRIEQHLITHKISQRKILVGKNGSKIGRIGIEANE
ELRTIFKRNVHLMLMVRVKS*

Transcript Sequence

Transcript ID

PGSC0003DMT400045738
Transcript Infomation

pacid=37428824 locus=PGSC0003DMG400017735 ID=PGSC0003DMT400045738.v4.03 annot-version=v4.03
Sequence

ATGAAAGCTTTAAGAGTTTTGAGGACATTGAACTCATCACTATCTTCAAATCGGAGCAAA
ACCCATTTTAATTCAACCATTTTCCTTCGGTTTTACTCAGCCCAACCTCAAGAAGACCAC
CCCACAAGCACTGGTCTTTCTTCCTCTGAAGAAGATGACACGTCTTCCTCAGTCTTCGAC
AGTTCGCAATACGATGTTAGTGTGGGATTAAACAATGATGTTAATTCAGAAAGCAGTGTA
AGCTCCACTTGGGATGAGAAATATAGGGATAGAGTGAAAACTAAAGTCTTTGGTGAAGAC
CCTTCAGAGATTAAGAGTTCAAGAATCTTGATTAAAGAAGAGGAGAAGAGAAGAAGAGCT
GCTTTATTGGCTAGGACTCTTCTAGAATCTGCACTGGACCGGCCTGATGAGGAAGGGGAC
GAAGATAAAGAGGATGAGTTGGTGAAGGAAGAAGATCAAATGTCATTGAGTGTTGGAATT
ATTGGAGCTCCTAATGCTGGGAAATCTTCATTGACTAATTACATGGTTGGGACCAAAGTT
TCTGCTGTATCACGGAAGACAAATACCACTACTCATGAAGTCTTAGGTGTGATGACTAAA
GGGAAAACACAAATTTGTTTCTTTGACACTCCCGGGCTTATGCTAAAGAAAAGTGGATTT
CCTTACAAAGACATGAAAGCACGTATTGAAAGTGCATGGAGGTCTATTGATCTATATGAT
GTACTCATTGTTATATTTGATGCTCATAGGCATCTTACCAAACCTGATTCCCGAGTGGTG
AGGTTGATTGAGAGAATGGGCTCGGAGGCTAAGCCAAACCAGAAGCGCTTACTGTGTATC
AATAAAGTTGACCTAATCGAGAAAAAGAAAGACATGTTGAAAGTTGTTGAGGAATTCAAA
GACCTTCCTGGATATGAAAGGTGCTTTACGGTATCCGGACTAAAGGGTGCTGGAGTGAAA
GATCTAACAAAATACTTGATGGAGCAGTCAGTGAAAAGACCGTGGGATGAAGATCCATTT
GTCATGAGTGAAGAAGTTATGAAGAATATTTCAATGGAGGTTGTCAGGGAAAAGTTGCTA
CATTACATACATCAGGAAATCCCATATGGTATTGACCATCGCCTGATGGACTGGAAGGAG
TTACGTGATGGTTCCCTAAGAATTGAACAGCATTTGATCACACACAAGATAAGCCAACGC
AAGATTCTCGTAGGAAAGAATGGTTCCAAAATAGGGAGAATAGGTATCGAGGCAAATGAA
GAGTTGAGAACGATATTCAAGAGAAACGTCCATCTAATGCTTATGGTTAGAGTGAAATCA
TGA