Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400045734
CDS Infomation

pacid=37424843 polypeptide=PGSC0003DMP400030991 locus=PGSC0003DMG400017734 ID=PGSC0003DMT400045734.v4.03 annot-version=v4.03
Sequence

ATGAGGTTGGAGACAATTTTGTATAAACTAGAAGTTTTAGATCACAAGGCCCGAGAAAGA
GCAGGAGTTATAGCAAATACGCTTGGCTCGCCAGTTCCTGTGCTTCTAAGTTTTGATGCT
GCTGTTGAGGCCTTGCAATCTCTATCCATTAAGTATGGAGTATTCCAGTCTATTTATAAT
TACTGGAAGGATAAGCGGGAGCGGTTGCAGAAGCCTTCTCTTCGGCGTTTGCAGCCGCCT
CCACCAGTTAACGACACAAATCCGTATAATGTATTTAGGCCAAGGGAGAAGGCCCACAGA
CTTCATACCAGAAGGATGCAAAGGAGGGAAAACAATGCACAGTCCTTTGAAAAGCTTCGC
CAGGTTAGGCGCAACCTTGACCAAGCAAAGATCATTCTTGAGGCTCTCATCAAGAGAGAG
GAGAAGAAGCGAGAGGTTATTGATAGTGAGATTAGCCTCCAGAGACTTCAAATGAAACAC
AAGAATGAAACTGAGCTTTTTGAGGATACCTTTACTCTGCCTGAATTTCCTTCCTTCCCA
AGTAAGGTTGGTTCAAGTGAGGACGAATTTGTCGACTCTGATGATCCTTCTACTAGCCGT
CGGCATATAGCACAAAACATAACCTTCCCGGACCCGAAGCTGGTGACTGCTTCTCCTAGA
ATCATGAGGCGAGAGTTCAAGCGAAGACTTGTGCCCCATGGATGGCTCTATAAATTGGAT
CCAAATGAGCCAACTCTGCTGTTCACGAAACCTCTGGATCCAGCCAAATTGTCAGCTGCA
GGCATTATACCTCCAGGTTCTCCAACACCAAATGGCCTACCTGCTCACACATTTAGCTTT
CGTGGAAGGATGGGGCGAGGTGGCCGTATTGTGTTTGACAGATGGAATCCACTTAGCCAT
ACACTCATTGAGTGCGGTGATACTTTATATGTTCCACCAAAGGCTCGACATTCTGCACAT
CAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400030991
PEP Infomation

pacid=37424843 transcript=PGSC0003DMT400045734 locus=PGSC0003DMG400017734 ID=PGSC0003DMT400045734.v4.03 annot-version=v4.03
Sequence

MRLETILYKLEVLDHKARERAGVIANTLGSPVPVLLSFDAAVEALQSLSIKYGVFQSIYN
YWKDKRERLQKPSLRRLQPPPPVNDTNPYNVFRPREKAHRLHTRRMQRRENNAQSFEKLR
QVRRNLDQAKIILEALIKREEKKREVIDSEISLQRLQMKHKNETELFEDTFTLPEFPSFP
SKVGSSEDEFVDSDDPSTSRRHIAQNITFPDPKLVTASPRIMRREFKRRLVPHGWLYKLD
PNEPTLLFTKPLDPAKLSAAGIIPPGSPTPNGLPAHTFSFRGRMGRGGRIVFDRWNPLSH
TLIECGDTLYVPPKARHSAHQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400045734
Transcript Infomation

pacid=37424843 locus=PGSC0003DMG400017734 ID=PGSC0003DMT400045734.v4.03 annot-version=v4.03
Sequence

ATGAGGTTGGAGACAATTTTGTATAAACTAGAAGTTTTAGATCACAAGGCCCGAGAAAGA
GCAGGAGTTATAGCAAATACGCTTGGCTCGCCAGTTCCTGTGCTTCTAAGTTTTGATGCT
GCTGTTGAGGCCTTGCAATCTCTATCCATTAAGTATGGAGTATTCCAGTCTATTTATAAT
TACTGGAAGGATAAGCGGGAGCGGTTGCAGAAGCCTTCTCTTCGGCGTTTGCAGCCGCCT
CCACCAGTTAACGACACAAATCCGTATAATGTATTTAGGCCAAGGGAGAAGGCCCACAGA
CTTCATACCAGAAGGATGCAAAGGAGGGAAAACAATGCACAGTCCTTTGAAAAGCTTCGC
CAGGTTAGGCGCAACCTTGACCAAGCAAAGATCATTCTTGAGGCTCTCATCAAGAGAGAG
GAGAAGAAGCGAGAGGTTATTGATAGTGAGATTAGCCTCCAGAGACTTCAAATGAAACAC
AAGAATGAAACTGAGCTTTTTGAGGATACCTTTACTCTGCCTGAATTTCCTTCCTTCCCA
AGTAAGGTTGGTTCAAGTGAGGACGAATTTGTCGACTCTGATGATCCTTCTACTAGCCGT
CGGCATATAGCACAAAACATAACCTTCCCGGACCCGAAGCTGGTGACTGCTTCTCCTAGA
ATCATGAGGCGAGAGTTCAAGCGAAGACTTGTGCCCCATGGATGGCTCTATAAATTGGAT
CCAAATGAGCCAACTCTGCTGTTCACGAAACCTCTGGATCCAGCCAAATTGTCAGCTGCA
GGCATTATACCTCCAGGTTCTCCAACACCAAATGGCCTACCTGCTCACACATTTAGCTTT
CGTGGAAGGATGGGGCGAGGTGGCCGTATTGTGTTTGACAGATGGAATCCACTTAGCCAT
ACACTCATTGAGTGCGGTGATACTTTATATGTTCCACCAAAGGCTCGACATTCTGCACAT
CAATGA