Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400045731
CDS Infomation

pacid=37428198 polypeptide=PGSC0003DMP400030988 locus=PGSC0003DMG402017733 ID=PGSC0003DMT400045731.v4.03 annot-version=v4.03
Sequence

ATGGTAATAACTGATAACAATGAAAATTGGAAATCTTGCTTTGAGAAATCTGAGGGAGAG
AATGCAGACATATATATAGGTTTGGATTCATTTGATGATTTACTTCCTCACTCAAGCGGC
ATAGATCCATCTGCTGCTCATGCTGCTGGTGCAGAGAAGCAACAAGAACAGCTTTTAATT
CCAGTTTCTTCAGTTGATGGTTCAGCTCATAGTGCTTCCAATCTTCAATCTGATGAAGTT
GCAGCAGGCCAAGATCCATTAACATTCCAAGCAAGTGTTCTTTCTGTTAGTGGAAGTTGT
CAGATGGAAATGGACACCTACTCTTCCTTGGAAGCTGATATCCTTGGGGTCACTACTATA
TCTGGGCAGAGTAGAAGATTCCAACCCAAGCCCAAGTTACAAGTATACAGAGAGAGATAT
GATACAATCATTCCTGATTTAGATGTAGGAGAGTCTGTGTCATGTCTGCCAGATTCACAC
TCCGTTCATTCTGAAATGGATTTTGTGGATAATGGGAAGGAACATGGATTACCTGCTGCT
GATGTCCTTGACTTCTCAGTCAGAGGATTTGATAATAATATTATTACAGAATCTGCACAT
GAATTTCCAGTTCATGAAGAATATGTTGCAGAGGCTTCTCTTCCAGATGCTGACATCCCA
GCAAAACACTCTGAGGCTACTTCTCAAATGCCTGAGGAACCTGTACCTCAGAGGCCTAAG
ACTAAAAAACAAAAATTCTCTGCATCTGAACTTTCTGCAATTAGTGAAGAGAACGGAGAG
AGTAGATCATTAAGGAGTAGAAGAAAGTCCGTGAATGCATCTAGACTAGTAGATGAGTTT
GATGAAGACGTAATTGGTGATGGGGAATATGTACCTGAACATCCTAATGATTCTGTTACA
ATTGGGAATGATGAGGAGTTTTTGGTGGAAAATGACTCGCAAGGGAAAAAGGTACAGAAG
AAGTCCAAGAAAACAGTTACTAAGGAAGGAAAACGAGTTAGGAAAAGTAAAAAGACTGCT
GAAGCTTCTGATCAGGCAGCCAACAAGAAGCCTAAAAAGTTTTCTCATTCCACTCGTCAA
AAGAGGAGAACAGTGGACAAGACTTTGCTTGAGGCTCCCATGGATGAGATTGACTATTCA
AAGGTGCCTATTAAGGATCTAATTTTATTAGCTGAGCACAAAGAGCGGTTGGCGAAAAAA
GACGCAGCAGTGTCACAAATACCTACTACTACAGATCAGAGTGCTCGTGCATCTGTTTCT
AATTATGATGAGGATGAGACCTATGCTTCAGATGAAGATGGGGAAGCTGATGATCATAGT
AAAAGTACTATGGCTGAAGATACTTCTGCCTACTTCAATTATCAGACTTACATGGACAAA
ACCCCCAGCACAAGGTGGTCAAAACAGGACACAGAACTTTTCTATGAGGCTGTGCAGCAG
TTTGGGACAGATTTATCCCTTATACAACAACTTTTTCCTGGCCGGACACGTAGACAGCTA
AAGCTAAAATACAAGAAAGAAGAGCGGCAAAATCCATTTAGGCTTCATGATGCTCTAACA
AATCGTTCGAAAGATCATTCCCACTTCGAACGAGTAATCGAGCGTTTAAAGCAAATTGAA
GCTGAGGAATTGCAGTACGCTGATAAAGACGAGTCAATTGACTTGACTGGGGAGGAGGAA
ATGGGGACTCAGGAGATCTATGAGGAAGAAGCAAAGTCTGAACATGTTGAGGAAAAAGAA
GTTGAAACAGTGGAGCAAGATGTTCCGGAAATGGAGAATCCAGTTAAGGAGTATGACGAT
GAAGATGATTTCATGAAATGGAGTCAGTATACGAGTGAAGTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400030988
PEP Infomation

pacid=37428198 transcript=PGSC0003DMT400045731 locus=PGSC0003DMG402017733 ID=PGSC0003DMT400045731.v4.03 annot-version=v4.03
Sequence

MVITDNNENWKSCFEKSEGENADIYIGLDSFDDLLPHSSGIDPSAAHAAGAEKQQEQLLI
PVSSVDGSAHSASNLQSDEVAAGQDPLTFQASVLSVSGSCQMEMDTYSSLEADILGVTTI
SGQSRRFQPKPKLQVYRERYDTIIPDLDVGESVSCLPDSHSVHSEMDFVDNGKEHGLPAA
DVLDFSVRGFDNNIITESAHEFPVHEEYVAEASLPDADIPAKHSEATSQMPEEPVPQRPK
TKKQKFSASELSAISEENGESRSLRSRRKSVNASRLVDEFDEDVIGDGEYVPEHPNDSVT
IGNDEEFLVENDSQGKKVQKKSKKTVTKEGKRVRKSKKTAEASDQAANKKPKKFSHSTRQ
KRRTVDKTLLEAPMDEIDYSKVPIKDLILLAEHKERLAKKDAAVSQIPTTTDQSARASVS
NYDEDETYASDEDGEADDHSKSTMAEDTSAYFNYQTYMDKTPSTRWSKQDTELFYEAVQQ
FGTDLSLIQQLFPGRTRRQLKLKYKKEERQNPFRLHDALTNRSKDHSHFERVIERLKQIE
AEELQYADKDESIDLTGEEEMGTQEIYEEEAKSEHVEEKEVETVEQDVPEMENPVKEYDD
EDDFMKWSQYTSEV*

Transcript Sequence

Transcript ID

PGSC0003DMT400045731
Transcript Infomation

pacid=37428198 locus=PGSC0003DMG402017733 ID=PGSC0003DMT400045731.v4.03 annot-version=v4.03
Sequence

ATGGTAATAACTGATAACAATGAAAATTGGAAATCTTGCTTTGAGAAATCTGAGGGAGAG
AATGCAGACATATATATAGGTTTGGATTCATTTGATGATTTACTTCCTCACTCAAGCGGC
ATAGATCCATCTGCTGCTCATGCTGCTGGTGCAGAGAAGCAACAAGAACAGCTTTTAATT
CCAGTTTCTTCAGTTGATGGTTCAGCTCATAGTGCTTCCAATCTTCAATCTGATGAAGTT
GCAGCAGGCCAAGATCCATTAACATTCCAAGCAAGTGTTCTTTCTGTTAGTGGAAGTTGT
CAGATGGAAATGGACACCTACTCTTCCTTGGAAGCTGATATCCTTGGGGTCACTACTATA
TCTGGGCAGAGTAGAAGATTCCAACCCAAGCCCAAGTTACAAGTATACAGAGAGAGATAT
GATACAATCATTCCTGATTTAGATGTAGGAGAGTCTGTGTCATGTCTGCCAGATTCACAC
TCCGTTCATTCTGAAATGGATTTTGTGGATAATGGGAAGGAACATGGATTACCTGCTGCT
GATGTCCTTGACTTCTCAGTCAGAGGATTTGATAATAATATTATTACAGAATCTGCACAT
GAATTTCCAGTTCATGAAGAATATGTTGCAGAGGCTTCTCTTCCAGATGCTGACATCCCA
GCAAAACACTCTGAGGCTACTTCTCAAATGCCTGAGGAACCTGTACCTCAGAGGCCTAAG
ACTAAAAAACAAAAATTCTCTGCATCTGAACTTTCTGCAATTAGTGAAGAGAACGGAGAG
AGTAGATCATTAAGGAGTAGAAGAAAGTCCGTGAATGCATCTAGACTAGTAGATGAGTTT
GATGAAGACGTAATTGGTGATGGGGAATATGTACCTGAACATCCTAATGATTCTGTTACA
ATTGGGAATGATGAGGAGTTTTTGGTGGAAAATGACTCGCAAGGGAAAAAGGTACAGAAG
AAGTCCAAGAAAACAGTTACTAAGGAAGGAAAACGAGTTAGGAAAAGTAAAAAGACTGCT
GAAGCTTCTGATCAGGCAGCCAACAAGAAGCCTAAAAAGTTTTCTCATTCCACTCGTCAA
AAGAGGAGAACAGTGGACAAGACTTTGCTTGAGGCTCCCATGGATGAGATTGACTATTCA
AAGGTGCCTATTAAGGATCTAATTTTATTAGCTGAGCACAAAGAGCGGTTGGCGAAAAAA
GACGCAGCAGTGTCACAAATACCTACTACTACAGATCAGAGTGCTCGTGCATCTGTTTCT
AATTATGATGAGGATGAGACCTATGCTTCAGATGAAGATGGGGAAGCTGATGATCATAGT
AAAAGTACTATGGCTGAAGATACTTCTGCCTACTTCAATTATCAGACTTACATGGACAAA
ACCCCCAGCACAAGGTGGTCAAAACAGGACACAGAACTTTTCTATGAGGCTGTGCAGCAG
TTTGGGACAGATTTATCCCTTATACAACAACTTTTTCCTGGCCGGACACGTAGACAGCTA
AAGCTAAAATACAAGAAAGAAGAGCGGCAAAATCCATTTAGGCTTCATGATGCTCTAACA
AATCGTTCGAAAGATCATTCCCACTTCGAACGAGTAATCGAGCGTTTAAAGCAAATTGAA
GCTGAGGAATTGCAGTACGCTGATAAAGACGAGTCAATTGACTTGACTGGGGAGGAGGAA
ATGGGGACTCAGGAGATCTATGAGGAAGAAGCAAAGTCTGAACATGTTGAGGAAAAAGAA
GTTGAAACAGTGGAGCAAGATGTTCCGGAAATGGAGAATCCAGTTAAGGAGTATGACGAT
GAAGATGATTTCATGAAATGGAGTCAGTATACGAGTGAAGTGTGA