Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400045722
CDS Infomation

pacid=37427736 polypeptide=PGSC0003DMP400030979 locus=PGSC0003DMG400017730 ID=PGSC0003DMT400045722.v4.03 annot-version=v4.03
Sequence

ATGTCTACTGCTCTTTCTTTGTCTGTCTCTCAGTTCCCCTTATGCAAATCCCAAGACTTT
TCCAAGGATACTTACAATCCTAAAATCTCCAATAAAGAAACCCCATGTCAGAAAACACAT
TCAGACACCAGAATAAACAGGAGGAAGCTGTTGAGTACTGGTGGTTTGAGCCTTGTAGCA
GGGACTTTGTCTAAGACAGCAAGAGCTGACACTGAAGCACCAGTTGAGGTAACTTCAAGT
AGAATGTCATATTCAAGATTCTTGGATTACTTGAATCAAGGTGCTGTCAAGAAAGTTGAT
TTCTTTGAGAACAGTGCTGTTGCTGAGATATTGATCAATCCTGCTCTTAACAAAGTTCAG
AGAGTTAAAATTCAGTTGCCAGGATTGCCACCAGAACTGGTGAGAAAACTTAAAGACAAG
AATGTAGATTTTGCTGCTCATCTCCCTGAAATGAATGTAATTGGACCACTTCTTGATTTA
CTTGGGAACTTAGCTTTTCCATTGATATTGCTTGGCTATTTGCTGTTGAGAAGCTCTTCA
AATACCCTTGGAGGGCCAAACTTGCCTTTTGGATTAGGAAGGAGCAAAGCCAAATTCCAG
ATGGAACCAAATACAGGAGTAACATTTGATGATGTGGCTGGAGTTAATGAAGCAAAACAA
GATTTTCAAGAGATTGTTGAGTTCTTGAAGACTCCAGAGAAGTTTGCTGCAGTTGGAGCA
AAGATACCAAAGGGATTTCTCTTAGTAGGGCCACCAGGGACAGGGAAGACATTGCTAGCT
AAGGCGATTGCCAGAGAAGCAGGGGTGCCATTCTTTTCTCTCTCTGGCTCAGAGTTCATT
GAGATGTTTGTTGGTGTAGGAGCTTCTAGAGTCAGGGACTTATTCAACAAGGCGAAACAA
AATTCGCCTTGCATAATTTTTATTGATGAAATTGATGCTGTTGGGAGGCAGAGAGGAACT
GGTATTGGTGGAGGAAATGATGAAAGAGAGCAGACACTGAACCAACTTCTTACTGAAATG
GATGGTTTTACTGGAAACACTGGAGTCATTGTCATTGCTGCTACTAATAGGCCTGAAATT
CTTGATCAAGCTTTGCTTAGACCTGGAAGGTTTGATAGACAGGTAACTGTTGGACTGCCT
GATATAAGAGGAAGAGAAGAAATATTGAAGGTTCACAGTAACAACAAGAAGCTTGACAAA
GATGTGTCTCTAAGTGTTATTGCAATGAGAACACCAGGATTCAGTGGTGCAGATCTTGCA
AACCTGATGAATGAAGCTGCCATTCTAGCTGGAAGGAGAGGAAAAGATAAGATTACCTCA
AAAGAGATAGATGATTCAATCGATAGAATTGTCGCTGGAATGGAAGGAACTACAATGACA
GATGGAAAGAACAAGATTCTGGTAGCATACCATGAGGTTGGACATGCTGTCTGCGCGACA
TTGACCCCTGGCCATGATGCAGTCCAGAAAGTCACATTGATCCCAAGAGGGCAAGCTCGC
GGTCTTACATGGTTCATCCCTGGTGAAGATCCAACCTTAATCTCCAAGAAGCAACTCTTT
GCTATAATAGTGGGAGGCTTAGGAGGTAGAGCAGCAGAGGAAATAATTTTTGGTGAACCA
GAAATCACTACTGGTGCAGCAGGAGACTTGCAACAAATAACTCAAATAGCAAGACAGATG
GTTACAATGTTTGGGATGTCTGAGATTGGACCATGGACGTTAACAGATCCAGCAGCACAA
AGTGGCGATGTGGTGCTGAGAATGCTAGCAAGGAATCAAATGTCAGAGAAACTAGCAGAA
GACATTGATGAATCTGTAAGGCACATAATTGAGAGAGCATATGAAATTGCAAAGAACCAC
ATAAGGAACAACAGGGAGGCAATCGACAAGTTAGTGGACGTGCTGCTGGAAAAGGAGACT
CTTACAGGAGATGAGTTTAGAGCTATACTCTCGGAATTCACTGATATCCCATCAGCTAAC
ATAAACAGCAAACCAATTAGAGAACTAATTGAGGCATAG

Peptide Sequence

PEP ID

PGSC0003DMP400030979
PEP Infomation

pacid=37427736 transcript=PGSC0003DMT400045722 locus=PGSC0003DMG400017730 ID=PGSC0003DMT400045722.v4.03 annot-version=v4.03
Sequence

MSTALSLSVSQFPLCKSQDFSKDTYNPKISNKETPCQKTHSDTRINRRKLLSTGGLSLVA
GTLSKTARADTEAPVEVTSSRMSYSRFLDYLNQGAVKKVDFFENSAVAEILINPALNKVQ
RVKIQLPGLPPELVRKLKDKNVDFAAHLPEMNVIGPLLDLLGNLAFPLILLGYLLLRSSS
NTLGGPNLPFGLGRSKAKFQMEPNTGVTFDDVAGVNEAKQDFQEIVEFLKTPEKFAAVGA
KIPKGFLLVGPPGTGKTLLAKAIAREAGVPFFSLSGSEFIEMFVGVGASRVRDLFNKAKQ
NSPCIIFIDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFTGNTGVIVIAATNRPEI
LDQALLRPGRFDRQVTVGLPDIRGREEILKVHSNNKKLDKDVSLSVIAMRTPGFSGADLA
NLMNEAAILAGRRGKDKITSKEIDDSIDRIVAGMEGTTMTDGKNKILVAYHEVGHAVCAT
LTPGHDAVQKVTLIPRGQARGLTWFIPGEDPTLISKKQLFAIIVGGLGGRAAEEIIFGEP
EITTGAAGDLQQITQIARQMVTMFGMSEIGPWTLTDPAAQSGDVVLRMLARNQMSEKLAE
DIDESVRHIIERAYEIAKNHIRNNREAIDKLVDVLLEKETLTGDEFRAILSEFTDIPSAN
INSKPIRELIEA*

Transcript Sequence

Transcript ID

PGSC0003DMT400045722
Transcript Infomation

pacid=37427736 locus=PGSC0003DMG400017730 ID=PGSC0003DMT400045722.v4.03 annot-version=v4.03
Sequence

ATGTCTACTGCTCTTTCTTTGTCTGTCTCTCAGTTCCCCTTATGCAAATCCCAAGACTTT
TCCAAGGATACTTACAATCCTAAAATCTCCAATAAAGAAACCCCATGTCAGAAAACACAT
TCAGACACCAGAATAAACAGGAGGAAGCTGTTGAGTACTGGTGGTTTGAGCCTTGTAGCA
GGGACTTTGTCTAAGACAGCAAGAGCTGACACTGAAGCACCAGTTGAGGTAACTTCAAGT
AGAATGTCATATTCAAGATTCTTGGATTACTTGAATCAAGGTGCTGTCAAGAAAGTTGAT
TTCTTTGAGAACAGTGCTGTTGCTGAGATATTGATCAATCCTGCTCTTAACAAAGTTCAG
AGAGTTAAAATTCAGTTGCCAGGATTGCCACCAGAACTGGTGAGAAAACTTAAAGACAAG
AATGTAGATTTTGCTGCTCATCTCCCTGAAATGAATGTAATTGGACCACTTCTTGATTTA
CTTGGGAACTTAGCTTTTCCATTGATATTGCTTGGCTATTTGCTGTTGAGAAGCTCTTCA
AATACCCTTGGAGGGCCAAACTTGCCTTTTGGATTAGGAAGGAGCAAAGCCAAATTCCAG
ATGGAACCAAATACAGGAGTAACATTTGATGATGTGGCTGGAGTTAATGAAGCAAAACAA
GATTTTCAAGAGATTGTTGAGTTCTTGAAGACTCCAGAGAAGTTTGCTGCAGTTGGAGCA
AAGATACCAAAGGGATTTCTCTTAGTAGGGCCACCAGGGACAGGGAAGACATTGCTAGCT
AAGGCGATTGCCAGAGAAGCAGGGGTGCCATTCTTTTCTCTCTCTGGCTCAGAGTTCATT
GAGATGTTTGTTGGTGTAGGAGCTTCTAGAGTCAGGGACTTATTCAACAAGGCGAAACAA
AATTCGCCTTGCATAATTTTTATTGATGAAATTGATGCTGTTGGGAGGCAGAGAGGAACT
GGTATTGGTGGAGGAAATGATGAAAGAGAGCAGACACTGAACCAACTTCTTACTGAAATG
GATGGTTTTACTGGAAACACTGGAGTCATTGTCATTGCTGCTACTAATAGGCCTGAAATT
CTTGATCAAGCTTTGCTTAGACCTGGAAGGTTTGATAGACAGGTAACTGTTGGACTGCCT
GATATAAGAGGAAGAGAAGAAATATTGAAGGTTCACAGTAACAACAAGAAGCTTGACAAA
GATGTGTCTCTAAGTGTTATTGCAATGAGAACACCAGGATTCAGTGGTGCAGATCTTGCA
AACCTGATGAATGAAGCTGCCATTCTAGCTGGAAGGAGAGGAAAAGATAAGATTACCTCA
AAAGAGATAGATGATTCAATCGATAGAATTGTCGCTGGAATGGAAGGAACTACAATGACA
GATGGAAAGAACAAGATTCTGGTAGCATACCATGAGGTTGGACATGCTGTCTGCGCGACA
TTGACCCCTGGCCATGATGCAGTCCAGAAAGTCACATTGATCCCAAGAGGGCAAGCTCGC
GGTCTTACATGGTTCATCCCTGGTGAAGATCCAACCTTAATCTCCAAGAAGCAACTCTTT
GCTATAATAGTGGGAGGCTTAGGAGGTAGAGCAGCAGAGGAAATAATTTTTGGTGAACCA
GAAATCACTACTGGTGCAGCAGGAGACTTGCAACAAATAACTCAAATAGCAAGACAGATG
GTTACAATGTTTGGGATGTCTGAGATTGGACCATGGACGTTAACAGATCCAGCAGCACAA
AGTGGCGATGTGGTGCTGAGAATGCTAGCAAGGAATCAAATGTCAGAGAAACTAGCAGAA
GACATTGATGAATCTGTAAGGCACATAATTGAGAGAGCATATGAAATTGCAAAGAACCAC
ATAAGGAACAACAGGGAGGCAATCGACAAGTTAGTGGACGTGCTGCTGGAAAAGGAGACT
CTTACAGGAGATGAGTTTAGAGCTATACTCTCGGAATTCACTGATATCCCATCAGCTAAC
ATAAACAGCAAACCAATTAGAGAACTAATTGAGGCATAG