Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400045666
CDS Infomation

pacid=37475574 polypeptide=PGSC0003DMP400030949 locus=PGSC0003DMG400017715 ID=PGSC0003DMT400045666.v4.03 annot-version=v4.03
Sequence

ATGGCAAAAATTGGAGAAAAATCAGTGGAAATTCAATTGGGTTGTGGTCTAGTGGCAGCG
ATATTTCAACGTGGAAATTGTAAGCCAATTAAACAACCAGTATCACAAATTTCCAAAAAG
AAATTATCCAAGCCTCAACCAAAACCACCCTCAATTACTCTGAGGAACTCGATTTCACAA
GATCGAAAACACGTTAGGAGATCAACATCTGATGGTACACGAAGCAGCTCGAAGATCAAC
CAATCGTCTAATTCTTCGAGCACGAAGAAAATGTCACAAGTTGTCAACTTGGTGCCTAAT
ACTCACAATCTTAGGAGGCAATCAATGTTCACCTCGAGTGACTTGAGCGCAAATGGAACG
TTGAATCACGCTTCAAGCACTGGGAACATTATGTTATTAGGCCAATTAGGGAATTTGAAG
CAGCAAAAGAGAATCCAACATGTTTCAACTGATGAAAAGTTTATTCTACAGAAAGGCAGA
GTATTGATGGGGAACATAGTAAACAAATTGGATTCTGATGTACTCAAATCAATGGGAAAT
GAACATTACAAACATGGAAGATTTGAACAAGCAATTGCTTTATATAATCAAGCAATTGCG
ATTAATCCGAAAAATGCTTGTTATTACAGCAACAAAAGTGCAGCTTTGTTGAGTTTAAAC
CGTTTGATTGAAGCTGTAATCGAATGCAGAGAGGCCATTCAGCTAGATCCTTTTTATTAC
AACGCGCAATATCGCCTTGCAAGACTATATCTCAGATTAGGAGAAGCAGAGAAAGCATTG
GAACATTACGAAAAATCAGGACCAAAAGTTGACAGAAGAGACATTTCTGAGGCTCAAAAT
CTTAAAAGAATGATCCGCAATTGCATAGAAGCTCAAAGGGTAAAAGATTACATCACATTA
CTTCATATGAGCGAGAATGCATTGCCATCTGGTACAGATTCAGCTCCACAGATATTTGCA
ATGAGAGCTGAAGCATTGATGAAATTACATAGACATGAGGAGGCATACACCATCATTCAG
AAGGGACCTAATTTCAAAACATGTCTTTCTACTCGTATTTTCGGATCAGCTAAAACAGCT
TATTTCCTAATAATTCGAGCACAAGTTTACACATTAGTAGGCAGGTTTGATGATGGAATC
AGTACAGCTCAAGAGGCTGCAAAACTCGATATCAGCAATGAGATAATCGCGATATTAAGA
AGAATTAAAGGGGTGGCATCAGCTCGGGTAAAGGGTAACGAGTTTTTTAAGGAATCGAAA
TACATAGAGGCTTGTTGTATGTACACAGAAGGACTAGAACAGGATCCATACAATTCTGTT
CTGTTATTTAACAGAGCAACTTGTCGAATCAAGCTAGGACAATTCGAGAAAGGATTGGAG
GATTGCAATGCAGCTCTTGTGTTACGTCCTTCGTATACTATGGCTAGAGTTCGTAGAGCT
GATTGTTACGTAAAGTTGGAAAGATGGGAGGCTGCAATTCAAGAATTTGAAATGTTGTTA
CAAGAAAAACAAGGGGATGAGGAAGTTAAGAGGGCATTGATTGATGCAAAGATTCAATTA
AAAAGGGAGAGGGAAGAGGATCAAAAACAAAGAAAGCTATGCAATGAATCTAACTTAGTG
TTAGTCATTAGCAATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400030949
PEP Infomation

pacid=37475574 transcript=PGSC0003DMT400045666 locus=PGSC0003DMG400017715 ID=PGSC0003DMT400045666.v4.03 annot-version=v4.03
Sequence

MAKIGEKSVEIQLGCGLVAAIFQRGNCKPIKQPVSQISKKKLSKPQPKPPSITLRNSISQ
DRKHVRRSTSDGTRSSSKINQSSNSSSTKKMSQVVNLVPNTHNLRRQSMFTSSDLSANGT
LNHASSTGNIMLLGQLGNLKQQKRIQHVSTDEKFILQKGRVLMGNIVNKLDSDVLKSMGN
EHYKHGRFEQAIALYNQAIAINPKNACYYSNKSAALLSLNRLIEAVIECREAIQLDPFYY
NAQYRLARLYLRLGEAEKALEHYEKSGPKVDRRDISEAQNLKRMIRNCIEAQRVKDYITL
LHMSENALPSGTDSAPQIFAMRAEALMKLHRHEEAYTIIQKGPNFKTCLSTRIFGSAKTA
YFLIIRAQVYTLVGRFDDGISTAQEAAKLDISNEIIAILRRIKGVASARVKGNEFFKESK
YIEACCMYTEGLEQDPYNSVLLFNRATCRIKLGQFEKGLEDCNAALVLRPSYTMARVRRA
DCYVKLERWEAAIQEFEMLLQEKQGDEEVKRALIDAKIQLKREREEDQKQRKLCNESNLV
LVISN*

Transcript Sequence

Transcript ID

PGSC0003DMT400045666
Transcript Infomation

pacid=37475574 locus=PGSC0003DMG400017715 ID=PGSC0003DMT400045666.v4.03 annot-version=v4.03
Sequence

ATGGCAAAAATTGGAGAAAAATCAGTGGAAATTCAATTGGGTTGTGGTCTAGTGGCAGCG
ATATTTCAACGTGGAAATTGTAAGCCAATTAAACAACCAGTATCACAAATTTCCAAAAAG
AAATTATCCAAGCCTCAACCAAAACCACCCTCAATTACTCTGAGGAACTCGATTTCACAA
GATCGAAAACACGTTAGGAGATCAACATCTGATGGTACACGAAGCAGCTCGAAGATCAAC
CAATCGTCTAATTCTTCGAGCACGAAGAAAATGTCACAAGTTGTCAACTTGGTGCCTAAT
ACTCACAATCTTAGGAGGCAATCAATGTTCACCTCGAGTGACTTGAGCGCAAATGGAACG
TTGAATCACGCTTCAAGCACTGGGAACATTATGTTATTAGGCCAATTAGGGAATTTGAAG
CAGCAAAAGAGAATCCAACATGTTTCAACTGATGAAAAGTTTATTCTACAGAAAGGCAGA
GTATTGATGGGGAACATAGTAAACAAATTGGATTCTGATGTACTCAAATCAATGGGAAAT
GAACATTACAAACATGGAAGATTTGAACAAGCAATTGCTTTATATAATCAAGCAATTGCG
ATTAATCCGAAAAATGCTTGTTATTACAGCAACAAAAGTGCAGCTTTGTTGAGTTTAAAC
CGTTTGATTGAAGCTGTAATCGAATGCAGAGAGGCCATTCAGCTAGATCCTTTTTATTAC
AACGCGCAATATCGCCTTGCAAGACTATATCTCAGATTAGGAGAAGCAGAGAAAGCATTG
GAACATTACGAAAAATCAGGACCAAAAGTTGACAGAAGAGACATTTCTGAGGCTCAAAAT
CTTAAAAGAATGATCCGCAATTGCATAGAAGCTCAAAGGGTAAAAGATTACATCACATTA
CTTCATATGAGCGAGAATGCATTGCCATCTGGTACAGATTCAGCTCCACAGATATTTGCA
ATGAGAGCTGAAGCATTGATGAAATTACATAGACATGAGGAGGCATACACCATCATTCAG
AAGGGACCTAATTTCAAAACATGTCTTTCTACTCGTATTTTCGGATCAGCTAAAACAGCT
TATTTCCTAATAATTCGAGCACAAGTTTACACATTAGTAGGCAGGTTTGATGATGGAATC
AGTACAGCTCAAGAGGCTGCAAAACTCGATATCAGCAATGAGATAATCGCGATATTAAGA
AGAATTAAAGGGGTGGCATCAGCTCGGGTAAAGGGTAACGAGTTTTTTAAGGAATCGAAA
TACATAGAGGCTTGTTGTATGTACACAGAAGGACTAGAACAGGATCCATACAATTCTGTT
CTGTTATTTAACAGAGCAACTTGTCGAATCAAGCTAGGACAATTCGAGAAAGGATTGGAG
GATTGCAATGCAGCTCTTGTGTTACGTCCTTCGTATACTATGGCTAGAGTTCGTAGAGCT
GATTGTTACGTAAAGTTGGAAAGATGGGAGGCTGCAATTCAAGAATTTGAAATGTTGTTA
CAAGAAAAACAAGGGGATGAGGAAGTTAAGAGGGCATTGATTGATGCAAAGATTCAATTA
AAAAGGGAGAGGGAAGAGGATCAAAAACAAAGAAAGCTATGCAATGAATCTAACTTAGTG
TTAGTCATTAGCAATTAA