Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400045644
CDS Infomation

pacid=37445419 polypeptide=PGSC0003DMP400030936 locus=PGSC0003DMG400017705 ID=PGSC0003DMT400045644.v4.03 annot-version=v4.03
Sequence

ATGGAGAGATCCAATAGCAGAGATTTCAAAGACTTGACTAGCTCCTCTAGTTCCATCTCA
GATGGTGCCCTCTTTGATGCATCACAATATGCATTTTTTGGGCTAGATATAGCGGAGGAA
GTTGAATTGGGTGGTTTAGAGGACGGACAAGACAATAGTGATCTGGCTGTTGGAGGTGGA
TTAGGTGACGACGAGATACAGGAATATCATTTATTTGAGAAAGACGAGGGATCTGCCGTG
GGCTCATTATCAGACATAGATGATCTAGCAACGACATTTTCAAAGTTGAACAGAAATGTC
ACTGGACCAAGGCATCCTGGTGTTATTGGTGACCGTGGATCAGGCTCTTTTTCAAGGGAA
AGTTCATCTGCAGCTGAATGGGCGAAAGAAGCAGACTTTCATGATTGGTTTGATCAGCAT
TTATCTGACACTGAATGTTACCAGGAAAGCAAAAAATGGTCTTCACAGCCACATATCTCT
GCAGTGCTTGCAGAGTCAAAACCATTGTATAGAACATCGTCATACCCCGAGCAACCCCCA
CAACCCCAACAACTTCAGCACTACTCTAGTGAACCCATTTTACTACCGAAATCATCTTAT
ACTTCTTTTCCTCCTCCTGGTGGTAGATCTCAACCCTCACCACATAGCCTTTCGCGACAA
AACATGTCATCTCTTTCTGCTGGACCTCAGTCTCCCTATTCTTCTGTGAATCTCTCTTCG
TTGCCGAACTCTAATCTGCATTTGACAGGCTTGGCTCACGGGCTTCACTATGGTAGTGGA
AACATCCCACATTTGAACCCTACTGGTCTTTCTCATAATTCTAGGTTGCAAAACCAGTGG
ACCAGCCATGCGGGACTCATCCATGGGGACCATTCTGGTCTCCTAGATAGTGTCTTGCAG
CATCAATTTCCTCATCAAAACAGCTTACTATCTCCCCAGTTACTGTCCCCACAGCAGCTG
CAACAGCAGAGACTTCATCTTTCAGTTCAGCCTTCTTTAGCTCATTTTTCAGCGCTAAGA
TCCCAATTGTATAATTCCTTCCCTTCACCATCTCATCTAGGCAAGTATGGATTGGCAGAT
TTCAGAGATTCACGATCTAAGCCATCACACAAGGTTAGACAAAATGTGCGCTTTTCTAAA
CAAGGCTCTGATGCTGCTAGCCACAAAAGTGAAAGTAATGTGCCACAGTTCCGATCTAAG
TATATGACTGGTGATGAGATAGAGAGCATCCTGAAAATGCAGCATTCTGCAGCACATGGC
AATGATCCATATGTAGATGACTACTATCACCAGGCCCGCCTTGCAAAGAAAGCAGCCGAG
TCGAGGTCAAAACATCGCTTCTGTCCAAATAAGGAACAGTCTTCTCGGTCACGTAATAGT
GCAGAATCACAGCCTCATCTTCACGTTGATGCTCAGGGGCGGGTGTCATTTTCTTCCATC
CGCAGGCCTCGTCCACTTCTGGAAGTTGATCCACCAGGCTTTGTTTGCATTGACAGCAGT
GCTGACCAGAAGATAACTGAGAGACCCTTGGAACAAGAGCCAATGCTTGCAGCTAGAATT
ACAATAGAAGATGGTTTCTATCTTCTCACTGAGGTAGATGACATTGACAGGCTCCTTCAG
TTTAGTCAGCCCCAAGACGGTGGTGCTCAGCTCAGGCGGAAGCGACAGATCCTGCTGGAA
GGCATGGCCGCCTCACTTCAACTAGTTGATCCGCTTGGTAAAGGTGGAAGTTCTGTCGGG
CTTACTCCTAAAGATGACATTGTATTTCTATGGTTGGTGTCTCTTCCCAAGGGCCAGAAG
CTCATGTCAAGGTATCTTCAGCTTCTTCTACCTGGCAATGAGCTTGTCAGAATAGTTTGT
ATGGCAATTTTCCGCCATTTGAGGTTTATATTTGGCGGTCATCCACCTGATGTAGGAGCA
GCTGAGACCATCACTGATCTTGCAAAAGTAGTCTCTAAATGTGTCACTGGCATGGACCTT
AATTCACTCAGTGCTTGTCTTGCTGCTGTTGTGTGTTCCTCAGAACAACCACCTCTTCGC
CCTCTTGGAAGCCCTGCTGGAGATGGAGCTTCTATTATTTTAAAGTCTGTTCTTGAAAGG
GCCACTCATCTATTAACTGATTCTCAGGCTGCTAACAGTTTCAGCATGCCTAATCCTGCC
CTTTGGCAGGCATCTTTTGATGCCTTTTTTGGTTTACTTACAAAGTATTGTCTGAGTAAG
TATGACAGTATCATGCAATCGATTCTAGCACAATCCCAGCCGGATGCTGAAATGATTGGT
TCGGATGCCGCAAGAGCCGTAAGCAGAGAAATGCCTGTGGAACTTTTACGTGCTAGTCTT
CCACATACAAATGACCACCAAAAGAAGCTGTTGTTGAATTTTGCTCAGCGGTCTATGCCT
GTTACTGGATTCAATTCTCATGGTGGAAGCAGTGGACATATAGATCCCGAATCTGTAAGC
TGTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400030936
PEP Infomation

pacid=37445419 transcript=PGSC0003DMT400045644 locus=PGSC0003DMG400017705 ID=PGSC0003DMT400045644.v4.03 annot-version=v4.03
Sequence

MERSNSRDFKDLTSSSSSISDGALFDASQYAFFGLDIAEEVELGGLEDGQDNSDLAVGGG
LGDDEIQEYHLFEKDEGSAVGSLSDIDDLATTFSKLNRNVTGPRHPGVIGDRGSGSFSRE
SSSAAEWAKEADFHDWFDQHLSDTECYQESKKWSSQPHISAVLAESKPLYRTSSYPEQPP
QPQQLQHYSSEPILLPKSSYTSFPPPGGRSQPSPHSLSRQNMSSLSAGPQSPYSSVNLSS
LPNSNLHLTGLAHGLHYGSGNIPHLNPTGLSHNSRLQNQWTSHAGLIHGDHSGLLDSVLQ
HQFPHQNSLLSPQLLSPQQLQQQRLHLSVQPSLAHFSALRSQLYNSFPSPSHLGKYGLAD
FRDSRSKPSHKVRQNVRFSKQGSDAASHKSESNVPQFRSKYMTGDEIESILKMQHSAAHG
NDPYVDDYYHQARLAKKAAESRSKHRFCPNKEQSSRSRNSAESQPHLHVDAQGRVSFSSI
RRPRPLLEVDPPGFVCIDSSADQKITERPLEQEPMLAARITIEDGFYLLTEVDDIDRLLQ
FSQPQDGGAQLRRKRQILLEGMAASLQLVDPLGKGGSSVGLTPKDDIVFLWLVSLPKGQK
LMSRYLQLLLPGNELVRIVCMAIFRHLRFIFGGHPPDVGAAETITDLAKVVSKCVTGMDL
NSLSACLAAVVCSSEQPPLRPLGSPAGDGASIILKSVLERATHLLTDSQAANSFSMPNPA
LWQASFDAFFGLLTKYCLSKYDSIMQSILAQSQPDAEMIGSDAARAVSREMPVELLRASL
PHTNDHQKKLLLNFAQRSMPVTGFNSHGGSSGHIDPESVSC*

Transcript Sequence

Transcript ID

PGSC0003DMT400045644
Transcript Infomation

pacid=37445419 locus=PGSC0003DMG400017705 ID=PGSC0003DMT400045644.v4.03 annot-version=v4.03
Sequence

ATGGAGAGATCCAATAGCAGAGATTTCAAAGACTTGACTAGCTCCTCTAGTTCCATCTCA
GATGGTGCCCTCTTTGATGCATCACAATATGCATTTTTTGGGCTAGATATAGCGGAGGAA
GTTGAATTGGGTGGTTTAGAGGACGGACAAGACAATAGTGATCTGGCTGTTGGAGGTGGA
TTAGGTGACGACGAGATACAGGAATATCATTTATTTGAGAAAGACGAGGGATCTGCCGTG
GGCTCATTATCAGACATAGATGATCTAGCAACGACATTTTCAAAGTTGAACAGAAATGTC
ACTGGACCAAGGCATCCTGGTGTTATTGGTGACCGTGGATCAGGCTCTTTTTCAAGGGAA
AGTTCATCTGCAGCTGAATGGGCGAAAGAAGCAGACTTTCATGATTGGTTTGATCAGCAT
TTATCTGACACTGAATGTTACCAGGAAAGCAAAAAATGGTCTTCACAGCCACATATCTCT
GCAGTGCTTGCAGAGTCAAAACCATTGTATAGAACATCGTCATACCCCGAGCAACCCCCA
CAACCCCAACAACTTCAGCACTACTCTAGTGAACCCATTTTACTACCGAAATCATCTTAT
ACTTCTTTTCCTCCTCCTGGTGGTAGATCTCAACCCTCACCACATAGCCTTTCGCGACAA
AACATGTCATCTCTTTCTGCTGGACCTCAGTCTCCCTATTCTTCTGTGAATCTCTCTTCG
TTGCCGAACTCTAATCTGCATTTGACAGGCTTGGCTCACGGGCTTCACTATGGTAGTGGA
AACATCCCACATTTGAACCCTACTGGTCTTTCTCATAATTCTAGGTTGCAAAACCAGTGG
ACCAGCCATGCGGGACTCATCCATGGGGACCATTCTGGTCTCCTAGATAGTGTCTTGCAG
CATCAATTTCCTCATCAAAACAGCTTACTATCTCCCCAGTTACTGTCCCCACAGCAGCTG
CAACAGCAGAGACTTCATCTTTCAGTTCAGCCTTCTTTAGCTCATTTTTCAGCGCTAAGA
TCCCAATTGTATAATTCCTTCCCTTCACCATCTCATCTAGGCAAGTATGGATTGGCAGAT
TTCAGAGATTCACGATCTAAGCCATCACACAAGGTTAGACAAAATGTGCGCTTTTCTAAA
CAAGGCTCTGATGCTGCTAGCCACAAAAGTGAAAGTAATGTGCCACAGTTCCGATCTAAG
TATATGACTGGTGATGAGATAGAGAGCATCCTGAAAATGCAGCATTCTGCAGCACATGGC
AATGATCCATATGTAGATGACTACTATCACCAGGCCCGCCTTGCAAAGAAAGCAGCCGAG
TCGAGGTCAAAACATCGCTTCTGTCCAAATAAGGAACAGTCTTCTCGGTCACGTAATAGT
GCAGAATCACAGCCTCATCTTCACGTTGATGCTCAGGGGCGGGTGTCATTTTCTTCCATC
CGCAGGCCTCGTCCACTTCTGGAAGTTGATCCACCAGGCTTTGTTTGCATTGACAGCAGT
GCTGACCAGAAGATAACTGAGAGACCCTTGGAACAAGAGCCAATGCTTGCAGCTAGAATT
ACAATAGAAGATGGTTTCTATCTTCTCACTGAGGTAGATGACATTGACAGGCTCCTTCAG
TTTAGTCAGCCCCAAGACGGTGGTGCTCAGCTCAGGCGGAAGCGACAGATCCTGCTGGAA
GGCATGGCCGCCTCACTTCAACTAGTTGATCCGCTTGGTAAAGGTGGAAGTTCTGTCGGG
CTTACTCCTAAAGATGACATTGTATTTCTATGGTTGGTGTCTCTTCCCAAGGGCCAGAAG
CTCATGTCAAGGTATCTTCAGCTTCTTCTACCTGGCAATGAGCTTGTCAGAATAGTTTGT
ATGGCAATTTTCCGCCATTTGAGGTTTATATTTGGCGGTCATCCACCTGATGTAGGAGCA
GCTGAGACCATCACTGATCTTGCAAAAGTAGTCTCTAAATGTGTCACTGGCATGGACCTT
AATTCACTCAGTGCTTGTCTTGCTGCTGTTGTGTGTTCCTCAGAACAACCACCTCTTCGC
CCTCTTGGAAGCCCTGCTGGAGATGGAGCTTCTATTATTTTAAAGTCTGTTCTTGAAAGG
GCCACTCATCTATTAACTGATTCTCAGGCTGCTAACAGTTTCAGCATGCCTAATCCTGCC
CTTTGGCAGGCATCTTTTGATGCCTTTTTTGGTTTACTTACAAAGTATTGTCTGAGTAAG
TATGACAGTATCATGCAATCGATTCTAGCACAATCCCAGCCGGATGCTGAAATGATTGGT
TCGGATGCCGCAAGAGCCGTAAGCAGAGAAATGCCTGTGGAACTTTTACGTGCTAGTCTT
CCACATACAAATGACCACCAAAAGAAGCTGTTGTTGAATTTTGCTCAGCGGTCTATGCCT
GTTACTGGATTCAATTCTCATGGTGGAAGCAGTGGACATATAGATCCCGAATCTGTAAGC
TGTTAG