Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400045639
CDS Infomation

pacid=37468915 polypeptide=PGSC0003DMP400030932 locus=PGSC0003DMG400017702 ID=PGSC0003DMT400045639.v4.03 annot-version=v4.03
Sequence

ATGATTGAACCAAAAAAGAAACAAAGAAAAGTTCTGCTTCTAGTTAATTTATTTTCAGCA
GTCAACAATGATAGTGCTAGAATAATTGATGGGAGGTCTGCTGCCGAGGAAATTAAATCA
AGCATAGCTGTAGAAGTTAGCAGAATGAAGGAGTCAATAGGAAAGGTCCCTGGTTTGGCT
GTAATATTAGTTGGCCAAAGGCGAGACTCTCTTGCCTATGTCCGTAACAAAATAATGGCT
TGCCATGAGGTTGGGTTCAGATTTTCAATTGCTGAACTCCCTGAGAGCTGTACAGAAGAC
GATGTCTGTGATGCATTGTCAAATTATAACAAGGATGCATCAATCCACGGTATTCTTGTG
CAGCTTCCTTTGCCACAGCATTTTGACGAGGGAAAGATTTTAAATGTACTAAGCTTAGAA
AAAGATGTGGATGGATTTCATCCATTAAACATTGGGAACTTGGCCATTCAGGGTAGAGAG
CCATTGTTCATCCCGTGCACTGCTAAAGGCTGCATCGAGTTACTGCTAAGTTCTGATGTT
GAAATCGTTGGGAAGAGAGCTGTAGTGATTGGGAGGAGCAACATCGTTGGATTACCTACT
TTTTTGTTGTTGCAGAGGCACCATGCAACAGTAAGCATTGTGCATGCATATTCAGAGAAT
CCCGAAATTATTACTCGCGAAGCTGATATACTTGTGGCAGCTGCTGGAGTACCTAATTTA
GTCCGTGGTAGCTGGTTAAAGCCCGGAGCAGTTGTACTTGACGTAGGAATAAACCCAATT
GAGGACCCTGAGAGTGAACATGGTTACCGTTTGATTGGAGATGTTTGCTTTGAAGAAGCA
GTCAGGATCGCTTCTGCTGTAACCCCAGTGCCTGGAGGTGTAGGTCCTATGACAGTTGCA
ATGCTTCTTCTGAACACCCTTGAAGCCGCCAAACGTGCACTTTGTTTTACTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400030932
PEP Infomation

pacid=37468915 transcript=PGSC0003DMT400045639 locus=PGSC0003DMG400017702 ID=PGSC0003DMT400045639.v4.03 annot-version=v4.03
Sequence

MIEPKKKQRKVLLLVNLFSAVNNDSARIIDGRSAAEEIKSSIAVEVSRMKESIGKVPGLA
VILVGQRRDSLAYVRNKIMACHEVGFRFSIAELPESCTEDDVCDALSNYNKDASIHGILV
QLPLPQHFDEGKILNVLSLEKDVDGFHPLNIGNLAIQGREPLFIPCTAKGCIELLLSSDV
EIVGKRAVVIGRSNIVGLPTFLLLQRHHATVSIVHAYSENPEIITREADILVAAAGVPNL
VRGSWLKPGAVVLDVGINPIEDPESEHGYRLIGDVCFEEAVRIASAVTPVPGGVGPMTVA
MLLLNTLEAAKRALCFT*

Transcript Sequence

Transcript ID

PGSC0003DMT400045639
Transcript Infomation

pacid=37468915 locus=PGSC0003DMG400017702 ID=PGSC0003DMT400045639.v4.03 annot-version=v4.03
Sequence

ATGATTGAACCAAAAAAGAAACAAAGAAAAGTTCTGCTTCTAGTTAATTTATTTTCAGCA
GTCAACAATGATAGTGCTAGAATAATTGATGGGAGGTCTGCTGCCGAGGAAATTAAATCA
AGCATAGCTGTAGAAGTTAGCAGAATGAAGGAGTCAATAGGAAAGGTCCCTGGTTTGGCT
GTAATATTAGTTGGCCAAAGGCGAGACTCTCTTGCCTATGTCCGTAACAAAATAATGGCT
TGCCATGAGGTTGGGTTCAGATTTTCAATTGCTGAACTCCCTGAGAGCTGTACAGAAGAC
GATGTCTGTGATGCATTGTCAAATTATAACAAGGATGCATCAATCCACGGTATTCTTGTG
CAGCTTCCTTTGCCACAGCATTTTGACGAGGGAAAGATTTTAAATGTACTAAGCTTAGAA
AAAGATGTGGATGGATTTCATCCATTAAACATTGGGAACTTGGCCATTCAGGGTAGAGAG
CCATTGTTCATCCCGTGCACTGCTAAAGGCTGCATCGAGTTACTGCTAAGTTCTGATGTT
GAAATCGTTGGGAAGAGAGCTGTAGTGATTGGGAGGAGCAACATCGTTGGATTACCTACT
TTTTTGTTGTTGCAGAGGCACCATGCAACAGTAAGCATTGTGCATGCATATTCAGAGAAT
CCCGAAATTATTACTCGCGAAGCTGATATACTTGTGGCAGCTGCTGGAGTACCTAATTTA
GTCCGTGGTAGCTGGTTAAAGCCCGGAGCAGTTGTACTTGACGTAGGAATAAACCCAATT
GAGGACCCTGAGAGTGAACATGGTTACCGTTTGATTGGAGATGTTTGCTTTGAAGAAGCA
GTCAGGATCGCTTCTGCTGTAACCCCAGTGCCTGGAGGTGTAGGTCCTATGACAGTTGCA
ATGCTTCTTCTGAACACCCTTGAAGCCGCCAAACGTGCACTTTGTTTTACTTGA