Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400045604
CDS Infomation

pacid=37476757 polypeptide=PGSC0003DMP400030905 locus=PGSC0003DMG400017689 ID=PGSC0003DMT400045604.v4.03 annot-version=v4.03
Sequence

ATGGCAACGGACATATCAAGAGTGGCTTCCTCACGGAGGCATTCGGAGAATGGGTTGCCA
TATGTTCACAAAGTAGGCGTTCCTCCGAAAACAAACTTACTCAAGGAGATCACTGAGACT
GTGAAAGAAACTTTCTTCCATGATGATCCGTTGCGTAATTTTAAGGATCAATCTAAGTCA
AAGAAATTGCTTCTTGCTATTCAAGCTGTTTTCCCTATTCTTGAGTGGGGAAGGTCTTAT
AATTTGTCTAAGTTTAAAGGTGACCTTATTTCTGGCCTTACTATAGCCACTCTCTGTATT
CCACAGGACATTGGCTATGCTAAACTTGCCAATTTGGATGCTCAATTTGGGCTATACAGT
AGCTTTGTGCCACCGTTGATTTATGCATTCATGGGAAGTTCGAGAGATATTGCGATAGGG
CCAGTGGCTGTGGTGTCTCTCTTGCTTGGAAGTATGCTTCAGCAAGAACTTGATCCTGTT
AAGCAAAAACACGAGTATCAGCGCCTTGCTTTCACTGCTACATTTTTCGCAGGCATTACG
CAGTTTGTTCTTGGATTTTTCAGGTTGGGTTTCTTGATTGACTTTCTATCTCATGCTGCA
ATTGTTGGGTTCATGGGTGGAGCAGCCATTACTATCAGCCTTCAACAACTTAAGGGTCTG
CTTGGCATAAAGAAATTCACTAAGAAAACTGATATTGTTTCGGTTATGAAATCAGTTTTT
GCTGCAGCACATCATGGGTGGAACTGGCAGACTATTGTGATAGGACTATCTTTCTTGGCT
TTCCTTCTAGTCGCCAAGTTCATCGGAAAGAAGCACAAGAAATTCTTTTGGGTGCCTGCA
ATTGCTCCGTTGATATCTGTTATCCTCTCGACATTCTTTGTGTTTATCTTCCATGCTGAA
AAACATGATGTCCAAATTGTAAGACACATCGATCAAGGGATCAATCCTCCATCATTGAAC
GAGATTTATTTCAGTGGTGAATATTTAACCAAAGGATTCAGAATTGGTGTAATTGCTGGT
TTGATAGCACTCACGGAGGCTGTAGCAATTGGAAGAACATTTGCAGCAATGAAGGATTAC
AGTTTGGATGGAAACAAAGAAATGGTTGCTTTAGGAACAATGAATATAGTTGGCTCAATG
ACATCCTGCTATGTGGCAACTGGATCCTTTTCTCGTTCAGCAGTCAACTATATGGCTGGA
TGTCACACGGCTGTCTCAAATATTGTCATGTCTTGTGTTGTGTTGCTAACTTTAGAACTG
ATCACACCGTTGTTCAAATACACACCAAATGCTATACTGGCTTCCATCATCATATCTGCA
GTTATCGGGTTGATAGATATCGATGCAATGACTCTTCTGTATAAGATTGATAAGTTTGAT
TTTGTTGCTTGCATGGGAGCCTTCTTAGGGGTGGTCTTCCAGTCTGTTGAGATAGGCCTC
TTGATCGCGGTTGCTATATCATTTGCCAAAATCCTCCTCCAAGTTACAAGGCCTCGGATT
GTGGTACTTGGCAAGGTCCCTAGGACACGAGTTTACAGAAATATACAGCAATATCCTGAA
TCAACAAAGGTCCCTGGAATTCTTATTGTGAGAGTTGATTCTGCTATCTACTTTTCCAAC
TCCAATTACATGAAGGACAGGATACTAAGATGGCTAACTGATGAAGATGAAATACTGAAA
GAAACTAATCAACAAAAGATCCAGTATTTGATAGTTGAGATGTCACCTGTTACTGATATT
GATACTAGTGGAATTCACTCATTAGAAGATCTGTATAAGTCACTCCAGAAAAGAAATGTC
GAGCTTGTTCTGGCAAATCCGGGGACAATGGTGATCGACAAGCTTCATGCATCTGGTCTC
GCCGATATGATTGGTGAAGACAAGATTTTCCTCACTGTGGCAGATGCTGTTATGACATTT
GCTCCAAAAATGGAGCCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400030905
PEP Infomation

pacid=37476757 transcript=PGSC0003DMT400045604 locus=PGSC0003DMG400017689 ID=PGSC0003DMT400045604.v4.03 annot-version=v4.03
Sequence

MATDISRVASSRRHSENGLPYVHKVGVPPKTNLLKEITETVKETFFHDDPLRNFKDQSKS
KKLLLAIQAVFPILEWGRSYNLSKFKGDLISGLTIATLCIPQDIGYAKLANLDAQFGLYS
SFVPPLIYAFMGSSRDIAIGPVAVVSLLLGSMLQQELDPVKQKHEYQRLAFTATFFAGIT
QFVLGFFRLGFLIDFLSHAAIVGFMGGAAITISLQQLKGLLGIKKFTKKTDIVSVMKSVF
AAAHHGWNWQTIVIGLSFLAFLLVAKFIGKKHKKFFWVPAIAPLISVILSTFFVFIFHAE
KHDVQIVRHIDQGINPPSLNEIYFSGEYLTKGFRIGVIAGLIALTEAVAIGRTFAAMKDY
SLDGNKEMVALGTMNIVGSMTSCYVATGSFSRSAVNYMAGCHTAVSNIVMSCVVLLTLEL
ITPLFKYTPNAILASIIISAVIGLIDIDAMTLLYKIDKFDFVACMGAFLGVVFQSVEIGL
LIAVAISFAKILLQVTRPRIVVLGKVPRTRVYRNIQQYPESTKVPGILIVRVDSAIYFSN
SNYMKDRILRWLTDEDEILKETNQQKIQYLIVEMSPVTDIDTSGIHSLEDLYKSLQKRNV
ELVLANPGTMVIDKLHASGLADMIGEDKIFLTVADAVMTFAPKMEP*

Transcript Sequence

Transcript ID

PGSC0003DMT400045604
Transcript Infomation

pacid=37476757 locus=PGSC0003DMG400017689 ID=PGSC0003DMT400045604.v4.03 annot-version=v4.03
Sequence

ATGGCAACGGACATATCAAGAGTGGCTTCCTCACGGAGGCATTCGGAGAATGGGTTGCCA
TATGTTCACAAAGTAGGCGTTCCTCCGAAAACAAACTTACTCAAGGAGATCACTGAGACT
GTGAAAGAAACTTTCTTCCATGATGATCCGTTGCGTAATTTTAAGGATCAATCTAAGTCA
AAGAAATTGCTTCTTGCTATTCAAGCTGTTTTCCCTATTCTTGAGTGGGGAAGGTCTTAT
AATTTGTCTAAGTTTAAAGGTGACCTTATTTCTGGCCTTACTATAGCCACTCTCTGTATT
CCACAGGACATTGGCTATGCTAAACTTGCCAATTTGGATGCTCAATTTGGGCTATACAGT
AGCTTTGTGCCACCGTTGATTTATGCATTCATGGGAAGTTCGAGAGATATTGCGATAGGG
CCAGTGGCTGTGGTGTCTCTCTTGCTTGGAAGTATGCTTCAGCAAGAACTTGATCCTGTT
AAGCAAAAACACGAGTATCAGCGCCTTGCTTTCACTGCTACATTTTTCGCAGGCATTACG
CAGTTTGTTCTTGGATTTTTCAGGTTGGGTTTCTTGATTGACTTTCTATCTCATGCTGCA
ATTGTTGGGTTCATGGGTGGAGCAGCCATTACTATCAGCCTTCAACAACTTAAGGGTCTG
CTTGGCATAAAGAAATTCACTAAGAAAACTGATATTGTTTCGGTTATGAAATCAGTTTTT
GCTGCAGCACATCATGGGTGGAACTGGCAGACTATTGTGATAGGACTATCTTTCTTGGCT
TTCCTTCTAGTCGCCAAGTTCATCGGAAAGAAGCACAAGAAATTCTTTTGGGTGCCTGCA
ATTGCTCCGTTGATATCTGTTATCCTCTCGACATTCTTTGTGTTTATCTTCCATGCTGAA
AAACATGATGTCCAAATTGTAAGACACATCGATCAAGGGATCAATCCTCCATCATTGAAC
GAGATTTATTTCAGTGGTGAATATTTAACCAAAGGATTCAGAATTGGTGTAATTGCTGGT
TTGATAGCACTCACGGAGGCTGTAGCAATTGGAAGAACATTTGCAGCAATGAAGGATTAC
AGTTTGGATGGAAACAAAGAAATGGTTGCTTTAGGAACAATGAATATAGTTGGCTCAATG
ACATCCTGCTATGTGGCAACTGGATCCTTTTCTCGTTCAGCAGTCAACTATATGGCTGGA
TGTCACACGGCTGTCTCAAATATTGTCATGTCTTGTGTTGTGTTGCTAACTTTAGAACTG
ATCACACCGTTGTTCAAATACACACCAAATGCTATACTGGCTTCCATCATCATATCTGCA
GTTATCGGGTTGATAGATATCGATGCAATGACTCTTCTGTATAAGATTGATAAGTTTGAT
TTTGTTGCTTGCATGGGAGCCTTCTTAGGGGTGGTCTTCCAGTCTGTTGAGATAGGCCTC
TTGATCGCGGTTGCTATATCATTTGCCAAAATCCTCCTCCAAGTTACAAGGCCTCGGATT
GTGGTACTTGGCAAGGTCCCTAGGACACGAGTTTACAGAAATATACAGCAATATCCTGAA
TCAACAAAGGTCCCTGGAATTCTTATTGTGAGAGTTGATTCTGCTATCTACTTTTCCAAC
TCCAATTACATGAAGGACAGGATACTAAGATGGCTAACTGATGAAGATGAAATACTGAAA
GAAACTAATCAACAAAAGATCCAGTATTTGATAGTTGAGATGTCACCTGTTACTGATATT
GATACTAGTGGAATTCACTCATTAGAAGATCTGTATAAGTCACTCCAGAAAAGAAATGTC
GAGCTTGTTCTGGCAAATCCGGGGACAATGGTGATCGACAAGCTTCATGCATCTGGTCTC
GCCGATATGATTGGTGAAGACAAGATTTTCCTCACTGTGGCAGATGCTGTTATGACATTT
GCTCCAAAAATGGAGCCTTGA