Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400045580
CDS Infomation

pacid=37474159 polypeptide=PGSC0003DMP400030889 locus=PGSC0003DMG400017680 ID=PGSC0003DMT400045580.v4.03 annot-version=v4.03
Sequence

ATGGATCAAAATAGAAGGCTGTTGATAGCACTCATTGTAGCTTCTACTGCATTGGGACTA
ATCATTTTATTCTGGATTTATCACACAAAAAGATTTCACACTTCAGATGTTGTGAAGGGG
ATGTGTAAATTCAATTTTTCCAAGTCCAGGAAAACATTGGTTTCTTTAATGGACTACAAC
ATACTTGAATCAGCCACCAACAAATTTCAAGAAACTGAGATTTTAGGTGAAGGGGGTTTT
GGACGTGTATACAAAGCTAAATTGGAAGACAATTTGTATGTAGCTGTCAAGAAACTAACC
CAAAATTCCATTAAAGAATTCGAGACTGAGGTAGAGTTGTTGAGTCAAATGCAACATCTC
AATATTATTTCATTGTTGGGATATTGCATCCACAGTGAAACAAGATTGCTTGTGTATGAA
CTCATGCACAATGGATCACTAGAAACTCAATTACATGGGCCTTCCCGTGGATCAGTATTA
ACGTGGCACCGCAGAATAAAAATTGCCCTTGATGCAGCAAGAGGAATAGAATATTTACAT
GAGCAGTGCCATCCCCCAGTGATCCATAGAGATCTGAAATCATCTAATATTCTTTTAGAT
TCCAACTTCAATGCAAAGCTGTCAGATTTTGGTCTTGCTGTGTTGGGTGGGGCTCAAAAC
AAAAACAATATCAAGCTTTCTGGAACTTTAGGTTATGTAGCCCCTGAATACATGTTAGAT
GGAAAATTAAGTGATAAAAGTGATGTTTATGCTTTTGGAGTTGTACTTTTGGAGCTGTTA
TTGGGAAGAAGGCCTGTAGAAAAAGAGGCACCAACTGAATGCCAGTCTATAGTCACATGG
GCCATGCCTCAGCTGACAGATAGATCAAAGCTTCCAAACATTGTGGATCCTGTCATACAA
AATACAATGGATTTAAAGCATTTGTATCAGGTTGCTGCAGTTGCTGTGTTATGTGTTCAG
CCAGAGCCAAGCTATCGTCCCCTAATAACCGATGTATTACATTCCTTAATCCCCCTTCTT
CCCACTGAATTAGGTGGGACGCTCCGAGTTACTACACAACAGCTGTCGCCTTCCGACAGC
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400030889
PEP Infomation

pacid=37474159 transcript=PGSC0003DMT400045580 locus=PGSC0003DMG400017680 ID=PGSC0003DMT400045580.v4.03 annot-version=v4.03
Sequence

MDQNRRLLIALIVASTALGLIILFWIYHTKRFHTSDVVKGMCKFNFSKSRKTLVSLMDYN
ILESATNKFQETEILGEGGFGRVYKAKLEDNLYVAVKKLTQNSIKEFETEVELLSQMQHL
NIISLLGYCIHSETRLLVYELMHNGSLETQLHGPSRGSVLTWHRRIKIALDAARGIEYLH
EQCHPPVIHRDLKSSNILLDSNFNAKLSDFGLAVLGGAQNKNNIKLSGTLGYVAPEYMLD
GKLSDKSDVYAFGVVLLELLLGRRPVEKEAPTECQSIVTWAMPQLTDRSKLPNIVDPVIQ
NTMDLKHLYQVAAVAVLCVQPEPSYRPLITDVLHSLIPLLPTELGGTLRVTTQQLSPSDS
*

Transcript Sequence

Transcript ID

PGSC0003DMT400045580
Transcript Infomation

pacid=37474159 locus=PGSC0003DMG400017680 ID=PGSC0003DMT400045580.v4.03 annot-version=v4.03
Sequence

ATGGATCAAAATAGAAGGCTGTTGATAGCACTCATTGTAGCTTCTACTGCATTGGGACTA
ATCATTTTATTCTGGATTTATCACACAAAAAGATTTCACACTTCAGATGTTGTGAAGGGG
ATGTGTAAATTCAATTTTTCCAAGTCCAGGAAAACATTGGTTTCTTTAATGGACTACAAC
ATACTTGAATCAGCCACCAACAAATTTCAAGAAACTGAGATTTTAGGTGAAGGGGGTTTT
GGACGTGTATACAAAGCTAAATTGGAAGACAATTTGTATGTAGCTGTCAAGAAACTAACC
CAAAATTCCATTAAAGAATTCGAGACTGAGGTAGAGTTGTTGAGTCAAATGCAACATCTC
AATATTATTTCATTGTTGGGATATTGCATCCACAGTGAAACAAGATTGCTTGTGTATGAA
CTCATGCACAATGGATCACTAGAAACTCAATTACATGGGCCTTCCCGTGGATCAGTATTA
ACGTGGCACCGCAGAATAAAAATTGCCCTTGATGCAGCAAGAGGAATAGAATATTTACAT
GAGCAGTGCCATCCCCCAGTGATCCATAGAGATCTGAAATCATCTAATATTCTTTTAGAT
TCCAACTTCAATGCAAAGCTGTCAGATTTTGGTCTTGCTGTGTTGGGTGGGGCTCAAAAC
AAAAACAATATCAAGCTTTCTGGAACTTTAGGTTATGTAGCCCCTGAATACATGTTAGAT
GGAAAATTAAGTGATAAAAGTGATGTTTATGCTTTTGGAGTTGTACTTTTGGAGCTGTTA
TTGGGAAGAAGGCCTGTAGAAAAAGAGGCACCAACTGAATGCCAGTCTATAGTCACATGG
GCCATGCCTCAGCTGACAGATAGATCAAAGCTTCCAAACATTGTGGATCCTGTCATACAA
AATACAATGGATTTAAAGCATTTGTATCAGGTTGCTGCAGTTGCTGTGTTATGTGTTCAG
CCAGAGCCAAGCTATCGTCCCCTAATAACCGATGTATTACATTCCTTAATCCCCCTTCTT
CCCACTGAATTAGGTGGGACGCTCCGAGTTACTACACAACAGCTGTCGCCTTCCGACAGC
TGA