Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400045517
CDS Infomation

pacid=37456885 polypeptide=PGSC0003DMP400030847 locus=PGSC0003DMG401017657 ID=PGSC0003DMT400045517.v4.03 annot-version=v4.03
Sequence

ATGCCAGAAATTGTTGGGATTCACGATCACGAAAGAACAAAAAGATATTATTTTGAGGCA
TCTGAGGATGAGAAGAGAAGAACTCGAATCAGATCTTTGAAAAAAAAGGCAATGAGTGCT
TCTACAAAGCTAACGCATTCGCTCAAAAGACGTAGTAAACGAGTCGCTCATTGCCGATTT
GCTTCCATTTCAACGGAAGATTTTCGAGACGAGAAAGAAGAGGAGGCAGTGAATTCATTT
CGCCAGGCCTTGATAGAAAAGGATCTCCTTCCGGCTCGTCATGATGACTATCATACTATG
TTGAGGTTCCTAAAAGCAAGGAAATTTGACCTTGATAAGGCCATGCTAATGTGGTCTGAA
ATGCTCAACTGGAGGAAAGAACAAGGAGTAGACACGATTATAGAGGATTTTGCCTATGAG
GAATATGAGGAAATTCAGCGTTATTACCCTCATGGTTACCATGGTGTAGACAGAGGAGGA
CGACCCGTCTATATTGAAAGACTTGGCAAGATTGAACCTACTAAACTTATGAATGTTACC
ACAATAGAAAGGTTCTTAAAGTATCATATCCAAGGGTTTGAAAGGACTTTTGCTGAAAAA
TTTCCAGCATGTTCGATCGCAGCTAGGAGGCATATAGATTCATCTACTACAATCTTGGAT
GTACAAGGACTGAATTGGCGGAGTTTTGGGAAACTTGCCCATGATTTGGTCATGCGCATG
CAAAAGATAGATGGTGACAACTATCCAGAGACATTGCACCAGATGTTTATTGTCAATGCT
GGAAATGGATTCAGATTTCTATGGAATACTGCAAAAGGATTTCTTGATCCAAAGACAACA
GCAAAAATTCATGTACTGGGAAACAAATTCCAGAGCAACTTAGCAGAAGTCATAGACCCC
AGCCAATTGCCAGATTTTCTTGGAGGAACCTGCTCATGCCCAAATCCAGATGGGTGTCTT
AGGTCTGATAAAGGACCCTGGAATGATCCAGAGCTGATGAAGCTGGTCCATGCATTACAT
GGTGAAGCACTTTATCCCAGGAGAATTACAAGCTTCTCCGATAGTGATATCGAAATCAAA
CCAGTTTCTCCACAGTTACTACGCAATGAGATTGGTTCGGCAGAATCTGAAGTGGAAGTG
GGGGTCTCGGCTTACAGTATCATGCAATCAAAACAACTTTCAGACAAAGTACCAACTAGG
AGATCTGTTTCATTTGGCAGCTTAGTTCAAGAAGATTATGGCCTTATGCTTACAGATGAA
CATTTGAATTCTCCAAATAGAGCTACTGTATCAGTACAAAGAAGGTCGCCTGAGAAATCC
ATCTTTAGCTTGATGATTAATATGATGGTCAAATCACTTGCATGGATATGCTTCTTGTTT
CATGGGGTGGGTAGGTTATTTGTGAAGAATAGTGATGCAAACAGATTGAGAAATGGACGG
GTATCAGTGAATGCAAGTTCAGCCGAGCAAAATGTTTCTTCCCCGAAAAAGGAGGATCTC
CTCCATCCATGCTGTCAGAGGTTGCAACATTTAGAGAACGTCGTAGCTGATTTGTTGAAG
AAACCAACCAAAATTCCTCCAGAAAAAGAGCTCATGCTGCTTGATTCAATGGACCGCATA
AAGTTCATAGAGTATGACTTGCAGAGGACGAAGAAAGCACTACTTGCAACAGCATCGCAA
CAAGTAGAGCTTGCTGAATCCATGGAATCTTTGAAGGAGAACAAATTGAAAGTGACAAAC
TCATGTTGGCGGAGAGGCAGGCCTTCACAATACAAAACCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400030847
PEP Infomation

pacid=37456885 transcript=PGSC0003DMT400045517 locus=PGSC0003DMG401017657 ID=PGSC0003DMT400045517.v4.03 annot-version=v4.03
Sequence

MPEIVGIHDHERTKRYYFEASEDEKRRTRIRSLKKKAMSASTKLTHSLKRRSKRVAHCRF
ASISTEDFRDEKEEEAVNSFRQALIEKDLLPARHDDYHTMLRFLKARKFDLDKAMLMWSE
MLNWRKEQGVDTIIEDFAYEEYEEIQRYYPHGYHGVDRGGRPVYIERLGKIEPTKLMNVT
TIERFLKYHIQGFERTFAEKFPACSIAARRHIDSSTTILDVQGLNWRSFGKLAHDLVMRM
QKIDGDNYPETLHQMFIVNAGNGFRFLWNTAKGFLDPKTTAKIHVLGNKFQSNLAEVIDP
SQLPDFLGGTCSCPNPDGCLRSDKGPWNDPELMKLVHALHGEALYPRRITSFSDSDIEIK
PVSPQLLRNEIGSAESEVEVGVSAYSIMQSKQLSDKVPTRRSVSFGSLVQEDYGLMLTDE
HLNSPNRATVSVQRRSPEKSIFSLMINMMVKSLAWICFLFHGVGRLFVKNSDANRLRNGR
VSVNASSAEQNVSSPKKEDLLHPCCQRLQHLENVVADLLKKPTKIPPEKELMLLDSMDRI
KFIEYDLQRTKKALLATASQQVELAESMESLKENKLKVTNSCWRRGRPSQYKT*

Transcript Sequence

Transcript ID

PGSC0003DMT400045517
Transcript Infomation

pacid=37456885 locus=PGSC0003DMG401017657 ID=PGSC0003DMT400045517.v4.03 annot-version=v4.03
Sequence

ATGCCAGAAATTGTTGGGATTCACGATCACGAAAGAACAAAAAGATATTATTTTGAGGCA
TCTGAGGATGAGAAGAGAAGAACTCGAATCAGATCTTTGAAAAAAAAGGCAATGAGTGCT
TCTACAAAGCTAACGCATTCGCTCAAAAGACGTAGTAAACGAGTCGCTCATTGCCGATTT
GCTTCCATTTCAACGGAAGATTTTCGAGACGAGAAAGAAGAGGAGGCAGTGAATTCATTT
CGCCAGGCCTTGATAGAAAAGGATCTCCTTCCGGCTCGTCATGATGACTATCATACTATG
TTGAGGTTCCTAAAAGCAAGGAAATTTGACCTTGATAAGGCCATGCTAATGTGGTCTGAA
ATGCTCAACTGGAGGAAAGAACAAGGAGTAGACACGATTATAGAGGATTTTGCCTATGAG
GAATATGAGGAAATTCAGCGTTATTACCCTCATGGTTACCATGGTGTAGACAGAGGAGGA
CGACCCGTCTATATTGAAAGACTTGGCAAGATTGAACCTACTAAACTTATGAATGTTACC
ACAATAGAAAGGTTCTTAAAGTATCATATCCAAGGGTTTGAAAGGACTTTTGCTGAAAAA
TTTCCAGCATGTTCGATCGCAGCTAGGAGGCATATAGATTCATCTACTACAATCTTGGAT
GTACAAGGACTGAATTGGCGGAGTTTTGGGAAACTTGCCCATGATTTGGTCATGCGCATG
CAAAAGATAGATGGTGACAACTATCCAGAGACATTGCACCAGATGTTTATTGTCAATGCT
GGAAATGGATTCAGATTTCTATGGAATACTGCAAAAGGATTTCTTGATCCAAAGACAACA
GCAAAAATTCATGTACTGGGAAACAAATTCCAGAGCAACTTAGCAGAAGTCATAGACCCC
AGCCAATTGCCAGATTTTCTTGGAGGAACCTGCTCATGCCCAAATCCAGATGGGTGTCTT
AGGTCTGATAAAGGACCCTGGAATGATCCAGAGCTGATGAAGCTGGTCCATGCATTACAT
GGTGAAGCACTTTATCCCAGGAGAATTACAAGCTTCTCCGATAGTGATATCGAAATCAAA
CCAGTTTCTCCACAGTTACTACGCAATGAGATTGGTTCGGCAGAATCTGAAGTGGAAGTG
GGGGTCTCGGCTTACAGTATCATGCAATCAAAACAACTTTCAGACAAAGTACCAACTAGG
AGATCTGTTTCATTTGGCAGCTTAGTTCAAGAAGATTATGGCCTTATGCTTACAGATGAA
CATTTGAATTCTCCAAATAGAGCTACTGTATCAGTACAAAGAAGGTCGCCTGAGAAATCC
ATCTTTAGCTTGATGATTAATATGATGGTCAAATCACTTGCATGGATATGCTTCTTGTTT
CATGGGGTGGGTAGGTTATTTGTGAAGAATAGTGATGCAAACAGATTGAGAAATGGACGG
GTATCAGTGAATGCAAGTTCAGCCGAGCAAAATGTTTCTTCCCCGAAAAAGGAGGATCTC
CTCCATCCATGCTGTCAGAGGTTGCAACATTTAGAGAACGTCGTAGCTGATTTGTTGAAG
AAACCAACCAAAATTCCTCCAGAAAAAGAGCTCATGCTGCTTGATTCAATGGACCGCATA
AAGTTCATAGAGTATGACTTGCAGAGGACGAAGAAAGCACTACTTGCAACAGCATCGCAA
CAAGTAGAGCTTGCTGAATCCATGGAATCTTTGAAGGAGAACAAATTGAAAGTGACAAAC
TCATGTTGGCGGAGAGGCAGGCCTTCACAATACAAAACCTGA