Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400045509
CDS Infomation

pacid=37454926 polypeptide=PGSC0003DMP400030841 locus=PGSC0003DMG400017655 ID=PGSC0003DMT400045509.v4.03 annot-version=v4.03
Sequence

ATGCAGTTTCCTCTTGTATCGAGGAGTGGGAGAATTCGGAAGCTTGTAGCAGGGCACAGG
GATTCTGATATATCGATGATTGAACTACTTAGTCTACCAGGTGGAGCTGAATCATTTGAG
CTAGCAGCCAAATTTTGTTATGGAGTTAACTTTGAGATTACAGCTGCAAATGTTGCTCAG
CTTTGTTGTGTGTCTGATTATCTTGAGATGACTGATGAGTATTCGAAAAATAACCTTGGT
TCCCGAGCTGAAGAGTATCTCGAGGTTGTTGTAAGCAAGAATCTTGAAATGTGTGTTGAA
GTTCTTAAACAATGTGAAAACCTGCTCCCTTTGGCTGATGAGCTGAAAGTAGTTATCCGA
TGCATTGATGCTATAGCCTCTAAAGCTTGTGTGGAGCAGATTGCTTCAAGCTTCTCGCGC
TTGGAATATAGTAGTTCTGGTAGACTCCATATGAATCGCCAGGCTAAGTGTGAAGGAGAC
TGGTGGATAGAGGATTTATCAGTTCTTCGTATTGACTTGTATCAACGAGTCATAACAGCA
ATGAAATGTCGTGGTGTTAGGCCTGAAAGTATTGCAGCTTCACTAGTTAACTATGCTCAG
AAGGAGTTGACAAAGAAGTCCACTTCCTGGAATCAGTCGACCCAACCAAAAGTTGATGTG
GTTTCAGGTTCAAATGACCATGAAAAAGTTGTGGTCGAGACGATTGTTAGCCTTATGCCT
GTTGAGAAATTGGTTGTTCCCATAACCTTTCTTTTTGGGCTACTGAGAAGTGCTGTGATG
CTTGATTGCACAGTTGCTTGTAGACTTGATCTTGAGAGGCGGATAGGATCTCAATTAGAC
ATAGCTACTCTCAATGATCTTCTCATTCCTTCTTTTCATAATGCTGGTGAAACATTATTT
GATGTCGACACAGTGCATAGGATCTTGGTTAGTTTTTCTCAACAGGAGGATAGTGATGAA
GATATGGATGATGTCTCAGTGTTTGAGTCTGATAGCCCTACTTCGCCATCCCAAACTGCA
TTATTCAAAGTCGCAAAACTGGTGGACAATTACCTAGCTGAAATTGCACCTGATGCAAAC
CTAAAGCTGAACAAGTTCATAGCAATTGCTGAAAGCTTACCAGCACATGCTCGTACCATC
CATGATGGACTTTATCGAGCAATCGATGTCTACCTCAAAGCTCATCAGGCCTTATCAGAT
CCAGACAGGAGGAGACTATGCAAGCTGATTGATTTTCAGAAACTCTCACAAGAATCTGGA
GCACACGCTGCACAAAATGAACGCCTCCCACTCCAATCAATTGTACAGGTTCTTTACTTT
GAGCAAATGAGGCTTCGAAATGCCTTATTTTGTTCTTATCCTGATGATGATCATAAACCA
ATGCACCAATCGTGGAGGATCAATAGTGGTGCTGTAAGTGCAGCTATGTCTCCCAGGGAT
AATTATGCTTCTCTAAGACGAGAAAATAAGGAACTAAAACTTGAACTAGCACGAATGAGG
ATGAGATTGAATGACCTGGAGAAAGATCATGTTTGTATGAAGAAAAATATGGAAAAATCT
AACTCGCGGAGATTCATGAGTACATTCACGAAAAAGATTGGGAAGTTGAACATCTTTGGA
CATAGTTCTTCCAGGGAGTCTAGTTCCCCCTCAAAGAGGTCACAAGTTACTGATTCTAAG
CTAACTGAAAGAACATGA

Peptide Sequence

PEP ID

PGSC0003DMP400030841
PEP Infomation

pacid=37454926 transcript=PGSC0003DMT400045509 locus=PGSC0003DMG400017655 ID=PGSC0003DMT400045509.v4.03 annot-version=v4.03
Sequence

MQFPLVSRSGRIRKLVAGHRDSDISMIELLSLPGGAESFELAAKFCYGVNFEITAANVAQ
LCCVSDYLEMTDEYSKNNLGSRAEEYLEVVVSKNLEMCVEVLKQCENLLPLADELKVVIR
CIDAIASKACVEQIASSFSRLEYSSSGRLHMNRQAKCEGDWWIEDLSVLRIDLYQRVITA
MKCRGVRPESIAASLVNYAQKELTKKSTSWNQSTQPKVDVVSGSNDHEKVVVETIVSLMP
VEKLVVPITFLFGLLRSAVMLDCTVACRLDLERRIGSQLDIATLNDLLIPSFHNAGETLF
DVDTVHRILVSFSQQEDSDEDMDDVSVFESDSPTSPSQTALFKVAKLVDNYLAEIAPDAN
LKLNKFIAIAESLPAHARTIHDGLYRAIDVYLKAHQALSDPDRRRLCKLIDFQKLSQESG
AHAAQNERLPLQSIVQVLYFEQMRLRNALFCSYPDDDHKPMHQSWRINSGAVSAAMSPRD
NYASLRRENKELKLELARMRMRLNDLEKDHVCMKKNMEKSNSRRFMSTFTKKIGKLNIFG
HSSSRESSSPSKRSQVTDSKLTERT*

Transcript Sequence

Transcript ID

PGSC0003DMT400045509
Transcript Infomation

pacid=37454926 locus=PGSC0003DMG400017655 ID=PGSC0003DMT400045509.v4.03 annot-version=v4.03
Sequence

ATGCAGTTTCCTCTTGTATCGAGGAGTGGGAGAATTCGGAAGCTTGTAGCAGGGCACAGG
GATTCTGATATATCGATGATTGAACTACTTAGTCTACCAGGTGGAGCTGAATCATTTGAG
CTAGCAGCCAAATTTTGTTATGGAGTTAACTTTGAGATTACAGCTGCAAATGTTGCTCAG
CTTTGTTGTGTGTCTGATTATCTTGAGATGACTGATGAGTATTCGAAAAATAACCTTGGT
TCCCGAGCTGAAGAGTATCTCGAGGTTGTTGTAAGCAAGAATCTTGAAATGTGTGTTGAA
GTTCTTAAACAATGTGAAAACCTGCTCCCTTTGGCTGATGAGCTGAAAGTAGTTATCCGA
TGCATTGATGCTATAGCCTCTAAAGCTTGTGTGGAGCAGATTGCTTCAAGCTTCTCGCGC
TTGGAATATAGTAGTTCTGGTAGACTCCATATGAATCGCCAGGCTAAGTGTGAAGGAGAC
TGGTGGATAGAGGATTTATCAGTTCTTCGTATTGACTTGTATCAACGAGTCATAACAGCA
ATGAAATGTCGTGGTGTTAGGCCTGAAAGTATTGCAGCTTCACTAGTTAACTATGCTCAG
AAGGAGTTGACAAAGAAGTCCACTTCCTGGAATCAGTCGACCCAACCAAAAGTTGATGTG
GTTTCAGGTTCAAATGACCATGAAAAAGTTGTGGTCGAGACGATTGTTAGCCTTATGCCT
GTTGAGAAATTGGTTGTTCCCATAACCTTTCTTTTTGGGCTACTGAGAAGTGCTGTGATG
CTTGATTGCACAGTTGCTTGTAGACTTGATCTTGAGAGGCGGATAGGATCTCAATTAGAC
ATAGCTACTCTCAATGATCTTCTCATTCCTTCTTTTCATAATGCTGGTGAAACATTATTT
GATGTCGACACAGTGCATAGGATCTTGGTTAGTTTTTCTCAACAGGAGGATAGTGATGAA
GATATGGATGATGTCTCAGTGTTTGAGTCTGATAGCCCTACTTCGCCATCCCAAACTGCA
TTATTCAAAGTCGCAAAACTGGTGGACAATTACCTAGCTGAAATTGCACCTGATGCAAAC
CTAAAGCTGAACAAGTTCATAGCAATTGCTGAAAGCTTACCAGCACATGCTCGTACCATC
CATGATGGACTTTATCGAGCAATCGATGTCTACCTCAAAGCTCATCAGGCCTTATCAGAT
CCAGACAGGAGGAGACTATGCAAGCTGATTGATTTTCAGAAACTCTCACAAGAATCTGGA
GCACACGCTGCACAAAATGAACGCCTCCCACTCCAATCAATTGTACAGGTTCTTTACTTT
GAGCAAATGAGGCTTCGAAATGCCTTATTTTGTTCTTATCCTGATGATGATCATAAACCA
ATGCACCAATCGTGGAGGATCAATAGTGGTGCTGTAAGTGCAGCTATGTCTCCCAGGGAT
AATTATGCTTCTCTAAGACGAGAAAATAAGGAACTAAAACTTGAACTAGCACGAATGAGG
ATGAGATTGAATGACCTGGAGAAAGATCATGTTTGTATGAAGAAAAATATGGAAAAATCT
AACTCGCGGAGATTCATGAGTACATTCACGAAAAAGATTGGGAAGTTGAACATCTTTGGA
CATAGTTCTTCCAGGGAGTCTAGTTCCCCCTCAAAGAGGTCACAAGTTACTGATTCTAAG
CTAACTGAAAGAACATGA