Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400045506
CDS Infomation

pacid=37457685 polypeptide=PGSC0003DMP400030838 locus=PGSC0003DMG400017653 ID=PGSC0003DMT400045506.v4.03 annot-version=v4.03
Sequence

ATGGCGCAGAGTAATTGGGAAGCAGATAAGATGCTGGATGTTTACATTCATGACTATCTG
CTGAAACGAAAGCTGCATAATTCTGCAAAAGCTTTCATGACAGAAGGAAAGGTTGCTACT
GATCCTGTAGCTATTGATGCACCTGGAGGATTTCTTTTTGAATGGTGGTCTGTGTTTTGG
GACATTTTCATTGCAAGGACAAATGAAAAACATTCCGAGGCAGCAGCAGCGTACATAGAG
ACTCAACAAATGAAAGCAAGAGAGCATCAGCATCAACAGCAGTTACAAATGCAGCAGTTG
CAACTCATGCAACAACGAAATGCACAGTTACAGCGAAGGGATCCAAATCATTCCCCTCAT
GGTGGTCCTATAAATGCTATCAACTCCGAAGGTATGATGGGGCAGCCATCTGCCAGTGTA
TTGGCAATGAAAATGTACGAGGAACGAATGAAGCACCCTCAGTCCATGGACTCGGAAACA
TCTTCATCACTTATTGATCCCAATAGGATGGCACTTCTAAAGTCAGCAACTAATCATCAA
GGCCAGTTGGTACAAGGAAATTCAGGGAACATGTTGCAGCAAATACAAGGACGGCCTCAG
CTGGCAACTGATATTAAAGGGGAAGTGAACTTGGGTGGCACTCACAAGTCTTTGCCCATG
GATCCTTCATCGATTTATGGGCAAGCGATTCTTCAGTCAAAGGCTGGTCTTGGTGCAGGG
TTGAACCAAGGTGTCACTGGTCTACCATTGAAGGGTTGGCCTTTAACAGGAATTGACCAG
GTAAGGCCTAGCTTGGGTTTGCAAGTACAAAAACCCAACTTACAGACCCAAAATCAATTT
CTTTTGGCATCACAACAACAGCAGGTCCTAGCTCAAGCTCAAGCCCAAGGTAACCTTGGA
AACTCACCTAATTATGGGTTTGGTGGATTACCTAGAGGGAACTTTAATGCCAAAGATGGT
CAGCCCCCAAGAAATGATGGATCCATTTGCTCTCCAGTACAGTCGAATTCCCCAAAGATG
AAAATGTCCCAAATGCAGCACTCTTCATCTCAACAACAGGACCAGTTGCAGCAGCAGCAG
CAACAACAGCAACAACTGCAACAGACCAACAGAAAAAGGAAGCAACATTCGTCTTCTGGA
CATGCTAATAGTACTGGCACTGGTAACACAGTTGGCCCTTCACCAAGTTCACCACAATCA
ACTCATACCCCAGGTGATGGGATGACTAGCATGTCAAAAGGTTTGATAATGTATGGAGAG
GGAACTGGCGGTATTGCATCCTCTACAAATCAGCTGGATGACTTAGAGCCTTTTGGAGAC
ATTGATAATGTGGAATCATTTCTGTCACAAGACGGGGGAGATGGAAACATCTATGGATCA
TTGAAGCAAACTCTTACTGAGCACAAGCCTGAATCTTCAAAAGGTTTCTCCTTTGGTGAA
GTTGGTTGTATACGCACAAGAAATAAAGTGACTTGCTGTCATTTCTCATCAGATGGGAAG
TTACTTGCTAGTGCCGGACATGACAAGAAGGCTGTTCTTTGGAACATGGATACTCTACAA
ACAGAGACCACCCCTGAGGAACATCAGTACTTGATTACAGATATCCGCTTCCGGCCTAAT
TCTTCTCAACTTGCAACTGCTTCATTTGACAAGTCTGTGAGATTATGGGACGCAACCAAT
CCTAGCTATTGTTTGCATGCTTACACGGGACATAGTCATCATGTTATGTCGTTGGATTTT
CATCCTAAAAAGAACGACCTATTCTGTTTCTGCGATAGCAACAATGAAATTCGCTACTGG
AGTATTAGTCCATTTTCATGTACTCGGGTGTCCAAGCAAAAAGGAAGCGCGCAAGTGAGG
TTTCAACCAATGACTGGGCGTTTGTTGGCTGCGGCTTCAGAGAAGATGGTTTCCGTCTTT
GATGTCGAAAATGACAGGCAAATTCATTCTTTCCAGGGGCATCCTGGAGTGGTGAACTAC
CTGTGTTGGGATCTCAACGGTGAGTTACTGGCATCAGTCAGTGAGGAGTCTGTCAAAGTT
TGGTCATTGGCCACCGGTGACTGCATTCATGAGCTAAGTTCTACGGGGAATCAGTTCCAC
TCTTGCGTTTTTCATCCTAGTTATCCTGCTCTATTGGTGATTGGAGGAATGAGGTCTCTG
GAGCTGTGGGACATGGTTGAGAACAAAAGCATGACGGTTCCAGCACATGAGAACATTATC
GCTGCCCTAGCACAGTCACCGGCAACTGGAATGGTTGGCTCTGCAAGTCATGACAGTTCG
GTCAAGTTATGGAAATAG

Peptide Sequence

PEP ID

PGSC0003DMP400030838
PEP Infomation

pacid=37457685 transcript=PGSC0003DMT400045506 locus=PGSC0003DMG400017653 ID=PGSC0003DMT400045506.v4.03 annot-version=v4.03
Sequence

MAQSNWEADKMLDVYIHDYLLKRKLHNSAKAFMTEGKVATDPVAIDAPGGFLFEWWSVFW
DIFIARTNEKHSEAAAAYIETQQMKAREHQHQQQLQMQQLQLMQQRNAQLQRRDPNHSPH
GGPINAINSEGMMGQPSASVLAMKMYEERMKHPQSMDSETSSSLIDPNRMALLKSATNHQ
GQLVQGNSGNMLQQIQGRPQLATDIKGEVNLGGTHKSLPMDPSSIYGQAILQSKAGLGAG
LNQGVTGLPLKGWPLTGIDQVRPSLGLQVQKPNLQTQNQFLLASQQQQVLAQAQAQGNLG
NSPNYGFGGLPRGNFNAKDGQPPRNDGSICSPVQSNSPKMKMSQMQHSSSQQQDQLQQQQ
QQQQQLQQTNRKRKQHSSSGHANSTGTGNTVGPSPSSPQSTHTPGDGMTSMSKGLIMYGE
GTGGIASSTNQLDDLEPFGDIDNVESFLSQDGGDGNIYGSLKQTLTEHKPESSKGFSFGE
VGCIRTRNKVTCCHFSSDGKLLASAGHDKKAVLWNMDTLQTETTPEEHQYLITDIRFRPN
SSQLATASFDKSVRLWDATNPSYCLHAYTGHSHHVMSLDFHPKKNDLFCFCDSNNEIRYW
SISPFSCTRVSKQKGSAQVRFQPMTGRLLAAASEKMVSVFDVENDRQIHSFQGHPGVVNY
LCWDLNGELLASVSEESVKVWSLATGDCIHELSSTGNQFHSCVFHPSYPALLVIGGMRSL
ELWDMVENKSMTVPAHENIIAALAQSPATGMVGSASHDSSVKLWK*

Transcript Sequence

Transcript ID

PGSC0003DMT400045506
Transcript Infomation

pacid=37457685 locus=PGSC0003DMG400017653 ID=PGSC0003DMT400045506.v4.03 annot-version=v4.03
Sequence

ATGGCGCAGAGTAATTGGGAAGCAGATAAGATGCTGGATGTTTACATTCATGACTATCTG
CTGAAACGAAAGCTGCATAATTCTGCAAAAGCTTTCATGACAGAAGGAAAGGTTGCTACT
GATCCTGTAGCTATTGATGCACCTGGAGGATTTCTTTTTGAATGGTGGTCTGTGTTTTGG
GACATTTTCATTGCAAGGACAAATGAAAAACATTCCGAGGCAGCAGCAGCGTACATAGAG
ACTCAACAAATGAAAGCAAGAGAGCATCAGCATCAACAGCAGTTACAAATGCAGCAGTTG
CAACTCATGCAACAACGAAATGCACAGTTACAGCGAAGGGATCCAAATCATTCCCCTCAT
GGTGGTCCTATAAATGCTATCAACTCCGAAGGTATGATGGGGCAGCCATCTGCCAGTGTA
TTGGCAATGAAAATGTACGAGGAACGAATGAAGCACCCTCAGTCCATGGACTCGGAAACA
TCTTCATCACTTATTGATCCCAATAGGATGGCACTTCTAAAGTCAGCAACTAATCATCAA
GGCCAGTTGGTACAAGGAAATTCAGGGAACATGTTGCAGCAAATACAAGGACGGCCTCAG
CTGGCAACTGATATTAAAGGGGAAGTGAACTTGGGTGGCACTCACAAGTCTTTGCCCATG
GATCCTTCATCGATTTATGGGCAAGCGATTCTTCAGTCAAAGGCTGGTCTTGGTGCAGGG
TTGAACCAAGGTGTCACTGGTCTACCATTGAAGGGTTGGCCTTTAACAGGAATTGACCAG
GTAAGGCCTAGCTTGGGTTTGCAAGTACAAAAACCCAACTTACAGACCCAAAATCAATTT
CTTTTGGCATCACAACAACAGCAGGTCCTAGCTCAAGCTCAAGCCCAAGGTAACCTTGGA
AACTCACCTAATTATGGGTTTGGTGGATTACCTAGAGGGAACTTTAATGCCAAAGATGGT
CAGCCCCCAAGAAATGATGGATCCATTTGCTCTCCAGTACAGTCGAATTCCCCAAAGATG
AAAATGTCCCAAATGCAGCACTCTTCATCTCAACAACAGGACCAGTTGCAGCAGCAGCAG
CAACAACAGCAACAACTGCAACAGACCAACAGAAAAAGGAAGCAACATTCGTCTTCTGGA
CATGCTAATAGTACTGGCACTGGTAACACAGTTGGCCCTTCACCAAGTTCACCACAATCA
ACTCATACCCCAGGTGATGGGATGACTAGCATGTCAAAAGGTTTGATAATGTATGGAGAG
GGAACTGGCGGTATTGCATCCTCTACAAATCAGCTGGATGACTTAGAGCCTTTTGGAGAC
ATTGATAATGTGGAATCATTTCTGTCACAAGACGGGGGAGATGGAAACATCTATGGATCA
TTGAAGCAAACTCTTACTGAGCACAAGCCTGAATCTTCAAAAGGTTTCTCCTTTGGTGAA
GTTGGTTGTATACGCACAAGAAATAAAGTGACTTGCTGTCATTTCTCATCAGATGGGAAG
TTACTTGCTAGTGCCGGACATGACAAGAAGGCTGTTCTTTGGAACATGGATACTCTACAA
ACAGAGACCACCCCTGAGGAACATCAGTACTTGATTACAGATATCCGCTTCCGGCCTAAT
TCTTCTCAACTTGCAACTGCTTCATTTGACAAGTCTGTGAGATTATGGGACGCAACCAAT
CCTAGCTATTGTTTGCATGCTTACACGGGACATAGTCATCATGTTATGTCGTTGGATTTT
CATCCTAAAAAGAACGACCTATTCTGTTTCTGCGATAGCAACAATGAAATTCGCTACTGG
AGTATTAGTCCATTTTCATGTACTCGGGTGTCCAAGCAAAAAGGAAGCGCGCAAGTGAGG
TTTCAACCAATGACTGGGCGTTTGTTGGCTGCGGCTTCAGAGAAGATGGTTTCCGTCTTT
GATGTCGAAAATGACAGGCAAATTCATTCTTTCCAGGGGCATCCTGGAGTGGTGAACTAC
CTGTGTTGGGATCTCAACGGTGAGTTACTGGCATCAGTCAGTGAGGAGTCTGTCAAAGTT
TGGTCATTGGCCACCGGTGACTGCATTCATGAGCTAAGTTCTACGGGGAATCAGTTCCAC
TCTTGCGTTTTTCATCCTAGTTATCCTGCTCTATTGGTGATTGGAGGAATGAGGTCTCTG
GAGCTGTGGGACATGGTTGAGAACAAAAGCATGACGGTTCCAGCACATGAGAACATTATC
GCTGCCCTAGCACAGTCACCGGCAACTGGAATGGTTGGCTCTGCAAGTCATGACAGTTCG
GTCAAGTTATGGAAATAG