Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400045504
CDS Infomation

pacid=37456459 polypeptide=PGSC0003DMP400030836 locus=PGSC0003DMG400017652 ID=PGSC0003DMT400045504.v4.03 annot-version=v4.03
Sequence

ATGAAAGATCAATCTTGGAGATGGGTTTTGGGTTTGGTTTATATAATTACTGTTGCATCT
ATATGGATTGCTGCTAGTTTTGTTGTTCAATCCGTTGTCGATGCCGGTGTTTCACCTTTT
CTTGTTACATACCTTTGCAATTCTTTATTTGTAGTATATATTCCCCTTATTGAAATTGTT
CGTTTTCTAGAGGATAAATATGGCACCTTGTTGTTTTGGCGAAATAACAAAGATACCAGT
GAATCAGAGGAGACTATTCTTCTTGATGACAATGCTGAAACAAGCAAATTGGTTGTTGCT
GATGGGTGTGAACAAATTATTGATCAAAATGTTGATATGGGCCTGGATGCAAAAAGGCGT
TGGACACGCTCTAGAGTAGCAAAAGTTAGCTTGTTGATATGCCCTTTTTGGTTTCTAGCT
CAGCTTACATTTAATCTATCACTCAAATATACAACTGTTACGTCGAATACCATCTTAAGC
AGTTCCTCCAGCTTGTTTACTTTTTTGGTGTCTCTTGTATTCTTGGGAGAAGTTTTTACT
TGGGTGAAGCTGTTCAGTGTTCTACTTTGTATGGGAGGAACAATTATTGTGAGCTTGGGT
GACTCAAAATCAGGGTCTAGCAAAGTTGCTTCGAACCCCGTTCTTGGTGACATTCTTTCT
CTTGTCTCAGCTGCTATGTATGCTGTTTATATAACCCTCATTCGTAAAAAGTTACCTGAT
GATGATGGGAAAAGTGGTCATGCCAGTATGGCACAGTTTCTTGGATATTTGGGTTTGTTC
AACATGCTCATATTCTTACCCATACCTCTTGTACTCAACTTTGCTAACCTTGAGCCATTT
AACACGCTCACTTGGAAGCAACTTGGCCTAATAGTTGGTAAAGGTATGTTTGATAATGTG
CTGAGCGATTTACTGTGGGCCAAGGCTATTCTCTTGACCTCCACAACAGTAGCAACAGCA
GGACTGACCATTCAGGTTCCGCTAGCTGCAATCGTGGATTCACTGACAGGAAATGCACCC
CCCATCATGGATTACATTGGAGCTGCAGCTGTCATGGTTGGTTTTGCAGGCATTAACATC
CCTTCAGATTCATGTTCAGTACCAGAAGAAGCAAGCATTGAACTAGAAAATGGGAAAATT
CAGTCCACAGAACAGGATCATCCATCACCCAGGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400030836
PEP Infomation

pacid=37456459 transcript=PGSC0003DMT400045504 locus=PGSC0003DMG400017652 ID=PGSC0003DMT400045504.v4.03 annot-version=v4.03
Sequence

MKDQSWRWVLGLVYIITVASIWIAASFVVQSVVDAGVSPFLVTYLCNSLFVVYIPLIEIV
RFLEDKYGTLLFWRNNKDTSESEETILLDDNAETSKLVVADGCEQIIDQNVDMGLDAKRR
WTRSRVAKVSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSSSSLFTFLVSLVFLGEVFT
WVKLFSVLLCMGGTIIVSLGDSKSGSSKVASNPVLGDILSLVSAAMYAVYITLIRKKLPD
DDGKSGHASMAQFLGYLGLFNMLIFLPIPLVLNFANLEPFNTLTWKQLGLIVGKGMFDNV
LSDLLWAKAILLTSTTVATAGLTIQVPLAAIVDSLTGNAPPIMDYIGAAAVMVGFAGINI
PSDSCSVPEEASIELENGKIQSTEQDHPSPR*

Transcript Sequence

Transcript ID

PGSC0003DMT400045504
Transcript Infomation

pacid=37456459 locus=PGSC0003DMG400017652 ID=PGSC0003DMT400045504.v4.03 annot-version=v4.03
Sequence

ATGAAAGATCAATCTTGGAGATGGGTTTTGGGTTTGGTTTATATAATTACTGTTGCATCT
ATATGGATTGCTGCTAGTTTTGTTGTTCAATCCGTTGTCGATGCCGGTGTTTCACCTTTT
CTTGTTACATACCTTTGCAATTCTTTATTTGTAGTATATATTCCCCTTATTGAAATTGTT
CGTTTTCTAGAGGATAAATATGGCACCTTGTTGTTTTGGCGAAATAACAAAGATACCAGT
GAATCAGAGGAGACTATTCTTCTTGATGACAATGCTGAAACAAGCAAATTGGTTGTTGCT
GATGGGTGTGAACAAATTATTGATCAAAATGTTGATATGGGCCTGGATGCAAAAAGGCGT
TGGACACGCTCTAGAGTAGCAAAAGTTAGCTTGTTGATATGCCCTTTTTGGTTTCTAGCT
CAGCTTACATTTAATCTATCACTCAAATATACAACTGTTACGTCGAATACCATCTTAAGC
AGTTCCTCCAGCTTGTTTACTTTTTTGGTGTCTCTTGTATTCTTGGGAGAAGTTTTTACT
TGGGTGAAGCTGTTCAGTGTTCTACTTTGTATGGGAGGAACAATTATTGTGAGCTTGGGT
GACTCAAAATCAGGGTCTAGCAAAGTTGCTTCGAACCCCGTTCTTGGTGACATTCTTTCT
CTTGTCTCAGCTGCTATGTATGCTGTTTATATAACCCTCATTCGTAAAAAGTTACCTGAT
GATGATGGGAAAAGTGGTCATGCCAGTATGGCACAGTTTCTTGGATATTTGGGTTTGTTC
AACATGCTCATATTCTTACCCATACCTCTTGTACTCAACTTTGCTAACCTTGAGCCATTT
AACACGCTCACTTGGAAGCAACTTGGCCTAATAGTTGGTAAAGGTATGTTTGATAATGTG
CTGAGCGATTTACTGTGGGCCAAGGCTATTCTCTTGACCTCCACAACAGTAGCAACAGCA
GGACTGACCATTCAGGTTCCGCTAGCTGCAATCGTGGATTCACTGACAGGAAATGCACCC
CCCATCATGGATTACATTGGAGCTGCAGCTGTCATGGTTGGTTTTGCAGGCATTAACATC
CCTTCAGATTCATGTTCAGTACCAGAAGAAGCAAGCATTGAACTAGAAAATGGGAAAATT
CAGTCCACAGAACAGGATCATCCATCACCCAGGTAG