Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400045499
CDS Infomation

pacid=37458358 polypeptide=PGSC0003DMP400030833 locus=PGSC0003DMG400017650 ID=PGSC0003DMT400045499.v4.03 annot-version=v4.03
Sequence

ATGGGTTGTTTTTCATGTTTTTCATCACAAGAAAAGAAGGCATTCAAAAGAATACATAGC
AAAAGCAAAGAAACATCTGATGTTGTTCGTCAAAGAGAAACTCTCTTGCATCAACAACAA
CAACAACGTCCACATTCATTATCGAGGCCAAAGCCACAGCAGGATCAGCGTTCTCATTCG
CAACCTCTATCTGAAAATACTAGAAAGGTGCCAGCAGAAACCACACACCAAAAGTCTTCT
AACAAAGGCGAAAGCCAGAACATTGCAGCTCAAACATTCACCTTCAGGGAACTGGCAACA
GCTACGAAGAACTTCCGATCAGAATGTCTGATAGGAGAAGGTGGATTTGGACGTGTTTAC
AAGGGACACCTTAACAAAACTGGCCAGACTGTAGCAGTGAAACAGCTTGACCGCAATGGA
TTGCAAGGAAACCGAGAATTTCTTGTGGAGGTGTTGATGTTGAGCCTTCTGCACCATTCA
AATCTTGTAAATCTAATTGGCTATTGTGCTGACGGAGATCAAAGACTTCTTGTTTATGAG
TACATGTCATTGGGATCATTGGAGGATCATCTGCTTGATCTTGAACGAGATAAACTTCCA
CTAGATTGGTTCACAAGGATGAAAATAGCATTACATGCTGCAAATGGACTCGAATATTTA
CATCATAGAGCCAATCCACCAGTCATTTACCGTGACTTGAAGTCCTCAAACATCTTGCTG
GATAAGGAACATAATGCAAAACTGTCAGACTTCGGGTTAGCCAAGGTTGGACCTACAGGG
GAAAACACCCATGTATCATCAAGAGTCATGGGAACGTACGGTTATTGTGCTCCTGAGTAC
CAACAAACTGGCAAGCTGACTATCAAGTCTGACGTCTATAGCTTTGGTGTAGTTTTATTG
GAGCTAATTACAGGTAGGAGAGCAGTTGATATCACAAGATTTGGGCATCAGCAGAACTTA
GTTACTTGGGCTGAACCCATATTCAAAGACACAAAGAGACACATTGAACTAGCTGATCCA
CTTCTTGGAGCAAATTTCCCAAGGAAAAATTTCAGTCAGGCTGTTGCTATTGCTTCTATG
TGTCTGCAAGATGATCCAGTAGTACGTCCTCTTATTAGTGATGTGGTCACTGCACTCAGT
ACCCTTTCAGTACCTGATTCACCATTCGCTTCTCCAACTCGAGCACCACCCCCAATGCAT
ATGTCAACTGAAGACAACATAATATCTACAAGAGAGTGCCAAGAAGAACTCGCAGAAGCC
ATAGAATGGGGTTCAAATTCAAGAAAACAGAATGCAAGATCACTAGCATCTTGCGGTTCT
TCAGTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400030833
PEP Infomation

pacid=37458358 transcript=PGSC0003DMT400045499 locus=PGSC0003DMG400017650 ID=PGSC0003DMT400045499.v4.03 annot-version=v4.03
Sequence

MGCFSCFSSQEKKAFKRIHSKSKETSDVVRQRETLLHQQQQQRPHSLSRPKPQQDQRSHS
QPLSENTRKVPAETTHQKSSNKGESQNIAAQTFTFRELATATKNFRSECLIGEGGFGRVY
KGHLNKTGQTVAVKQLDRNGLQGNREFLVEVLMLSLLHHSNLVNLIGYCADGDQRLLVYE
YMSLGSLEDHLLDLERDKLPLDWFTRMKIALHAANGLEYLHHRANPPVIYRDLKSSNILL
DKEHNAKLSDFGLAKVGPTGENTHVSSRVMGTYGYCAPEYQQTGKLTIKSDVYSFGVVLL
ELITGRRAVDITRFGHQQNLVTWAEPIFKDTKRHIELADPLLGANFPRKNFSQAVAIASM
CLQDDPVVRPLISDVVTALSTLSVPDSPFASPTRAPPPMHMSTEDNIISTRECQEELAEA
IEWGSNSRKQNARSLASCGSSV*

Transcript Sequence

Transcript ID

PGSC0003DMT400045499
Transcript Infomation

pacid=37458358 locus=PGSC0003DMG400017650 ID=PGSC0003DMT400045499.v4.03 annot-version=v4.03
Sequence

ATGGGTTGTTTTTCATGTTTTTCATCACAAGAAAAGAAGGCATTCAAAAGAATACATAGC
AAAAGCAAAGAAACATCTGATGTTGTTCGTCAAAGAGAAACTCTCTTGCATCAACAACAA
CAACAACGTCCACATTCATTATCGAGGCCAAAGCCACAGCAGGATCAGCGTTCTCATTCG
CAACCTCTATCTGAAAATACTAGAAAGGTGCCAGCAGAAACCACACACCAAAAGTCTTCT
AACAAAGGCGAAAGCCAGAACATTGCAGCTCAAACATTCACCTTCAGGGAACTGGCAACA
GCTACGAAGAACTTCCGATCAGAATGTCTGATAGGAGAAGGTGGATTTGGACGTGTTTAC
AAGGGACACCTTAACAAAACTGGCCAGACTGTAGCAGTGAAACAGCTTGACCGCAATGGA
TTGCAAGGAAACCGAGAATTTCTTGTGGAGGTGTTGATGTTGAGCCTTCTGCACCATTCA
AATCTTGTAAATCTAATTGGCTATTGTGCTGACGGAGATCAAAGACTTCTTGTTTATGAG
TACATGTCATTGGGATCATTGGAGGATCATCTGCTTGATCTTGAACGAGATAAACTTCCA
CTAGATTGGTTCACAAGGATGAAAATAGCATTACATGCTGCAAATGGACTCGAATATTTA
CATCATAGAGCCAATCCACCAGTCATTTACCGTGACTTGAAGTCCTCAAACATCTTGCTG
GATAAGGAACATAATGCAAAACTGTCAGACTTCGGGTTAGCCAAGGTTGGACCTACAGGG
GAAAACACCCATGTATCATCAAGAGTCATGGGAACGTACGGTTATTGTGCTCCTGAGTAC
CAACAAACTGGCAAGCTGACTATCAAGTCTGACGTCTATAGCTTTGGTGTAGTTTTATTG
GAGCTAATTACAGGTAGGAGAGCAGTTGATATCACAAGATTTGGGCATCAGCAGAACTTA
GTTACTTGGGCTGAACCCATATTCAAAGACACAAAGAGACACATTGAACTAGCTGATCCA
CTTCTTGGAGCAAATTTCCCAAGGAAAAATTTCAGTCAGGCTGTTGCTATTGCTTCTATG
TGTCTGCAAGATGATCCAGTAGTACGTCCTCTTATTAGTGATGTGGTCACTGCACTCAGT
ACCCTTTCAGTACCTGATTCACCATTCGCTTCTCCAACTCGAGCACCACCCCCAATGCAT
ATGTCAACTGAAGACAACATAATATCTACAAGAGAGTGCCAAGAAGAACTCGCAGAAGCC
ATAGAATGGGGTTCAAATTCAAGAAAACAGAATGCAAGATCACTAGCATCTTGCGGTTCT
TCAGTGTGA