Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400045416
CDS Infomation

pacid=37443019 polypeptide=PGSC0003DMP400030772 locus=PGSC0003DMG400017621 ID=PGSC0003DMT400045416.v4.03 annot-version=v4.03
Sequence

ATGCCTTGTGAACAAGTTCATGGTGCACAAGCTGCAATGTTGTTCATAGGACTCTACCTA
GTGGCATTAGGTGTTGGAGGTATAAAGGGATCACTACCACCCCACGGTGCTGAACAGTTC
GATGAATCAACTCCGCGTGGAAGGAAGCAGAGATCAACTTTCTTCAATTACTTTGTGTTC
TGTCTCTCCTTTGGAGCTCTCATTGCTGTCACATTAGTTGTTTGGATGGAAGACAATAAG
GGATGGCAATGGGGATTCGGAATTGCAACTTTAGCTATATTTTTGTCAATCCCGATATTC
CTGGCTGGTTCACCATTCTATCGGAACAAGATACCTCGTGGTAGCCCTCTTACAACGATC
AATAAGGTTATAATTGCAGCATTACTAAATTCTAGTGCTAGTTCATCGAAAAACTCAAGC
ACTGTCATTGCAAGTATGACTTCAAGTCCTTCTCCTCCGATTCCAACGAGCAAAGATGTG
GAATCAATCGAGACAGCTCCATCAAGTAGTTTTAGCTTTCTTAATCGGGCTGTTTCAGAC
ACACCAGCTTGTGGCGCACTAAAATGCACAGTGCAGCAAGTGGAAGAAGTTAAGATTGTG
ATGAAACTTTTACCGATTTTCGCCTGCACCATCATGCTCAACTGTTGTCTAGCTCAACTA
AATACATTCTCTGTCCATCAAGCTGCCTCTATGAACACAAAGGTTGGTTCTTTAAAAGTC
CCACCGGCTTCACTCCCAGTTTTCCCTGTAGTATTCATCATGATCTTAGCACCAGTTTAC
GATCACTTCATCATCCCATTTACTCGTAGAGTAACCAAAACAGAAATGGGGATCTCACAC
CTTCAACGTATTGGTATCGGTTTGTTCCTTTCCATCGTGGCAATGGCAATCGCAGCTCTA
GTTGAAATCAAACGCAAAGGAGTAGTTACTGATTCAGGACTCATTGACTCTGCTAAACCA
TTGCCTATAACATTCTTTTGGATCGCATTTCAGTACTTGTTTCTCGGGTCAGCTGATCTT
TTCGTTCTAGCAGGGCTACTAGAATTCTGTTTCTCAGAAGCACCAGTGAGTATGAGATCA
TTGGCAACATCTCTGTCGTGGGCTTCTTTAGCTATCGGATACTACCTCAGCTCGGTGATA
GTGTCTATTGTCAATCGTGTAACAGGCATTTCAACGAACAAGCCATGGCTCGCGGGTAGT
AACTTGAATCACTACCATTTAGAGAGGTTCTACTGGCTAATGTGCATACTCAGTGCATTA
AACTTTATGCACTACTTATTCTGGGCAACAAAATACAAGTATACATCAGTCACGTCTAGT
AGATGTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400030772
PEP Infomation

pacid=37443019 transcript=PGSC0003DMT400045416 locus=PGSC0003DMG400017621 ID=PGSC0003DMT400045416.v4.03 annot-version=v4.03
Sequence

MPCEQVHGAQAAMLFIGLYLVALGVGGIKGSLPPHGAEQFDESTPRGRKQRSTFFNYFVF
CLSFGALIAVTLVVWMEDNKGWQWGFGIATLAIFLSIPIFLAGSPFYRNKIPRGSPLTTI
NKVIIAALLNSSASSSKNSSTVIASMTSSPSPPIPTSKDVESIETAPSSSFSFLNRAVSD
TPACGALKCTVQQVEEVKIVMKLLPIFACTIMLNCCLAQLNTFSVHQAASMNTKVGSLKV
PPASLPVFPVVFIMILAPVYDHFIIPFTRRVTKTEMGISHLQRIGIGLFLSIVAMAIAAL
VEIKRKGVVTDSGLIDSAKPLPITFFWIAFQYLFLGSADLFVLAGLLEFCFSEAPVSMRS
LATSLSWASLAIGYYLSSVIVSIVNRVTGISTNKPWLAGSNLNHYHLERFYWLMCILSAL
NFMHYLFWATKYKYTSVTSSRC*

Transcript Sequence

Transcript ID

PGSC0003DMT400045416
Transcript Infomation

pacid=37443019 locus=PGSC0003DMG400017621 ID=PGSC0003DMT400045416.v4.03 annot-version=v4.03
Sequence

ATGCCTTGTGAACAAGTTCATGGTGCACAAGCTGCAATGTTGTTCATAGGACTCTACCTA
GTGGCATTAGGTGTTGGAGGTATAAAGGGATCACTACCACCCCACGGTGCTGAACAGTTC
GATGAATCAACTCCGCGTGGAAGGAAGCAGAGATCAACTTTCTTCAATTACTTTGTGTTC
TGTCTCTCCTTTGGAGCTCTCATTGCTGTCACATTAGTTGTTTGGATGGAAGACAATAAG
GGATGGCAATGGGGATTCGGAATTGCAACTTTAGCTATATTTTTGTCAATCCCGATATTC
CTGGCTGGTTCACCATTCTATCGGAACAAGATACCTCGTGGTAGCCCTCTTACAACGATC
AATAAGGTTATAATTGCAGCATTACTAAATTCTAGTGCTAGTTCATCGAAAAACTCAAGC
ACTGTCATTGCAAGTATGACTTCAAGTCCTTCTCCTCCGATTCCAACGAGCAAAGATGTG
GAATCAATCGAGACAGCTCCATCAAGTAGTTTTAGCTTTCTTAATCGGGCTGTTTCAGAC
ACACCAGCTTGTGGCGCACTAAAATGCACAGTGCAGCAAGTGGAAGAAGTTAAGATTGTG
ATGAAACTTTTACCGATTTTCGCCTGCACCATCATGCTCAACTGTTGTCTAGCTCAACTA
AATACATTCTCTGTCCATCAAGCTGCCTCTATGAACACAAAGGTTGGTTCTTTAAAAGTC
CCACCGGCTTCACTCCCAGTTTTCCCTGTAGTATTCATCATGATCTTAGCACCAGTTTAC
GATCACTTCATCATCCCATTTACTCGTAGAGTAACCAAAACAGAAATGGGGATCTCACAC
CTTCAACGTATTGGTATCGGTTTGTTCCTTTCCATCGTGGCAATGGCAATCGCAGCTCTA
GTTGAAATCAAACGCAAAGGAGTAGTTACTGATTCAGGACTCATTGACTCTGCTAAACCA
TTGCCTATAACATTCTTTTGGATCGCATTTCAGTACTTGTTTCTCGGGTCAGCTGATCTT
TTCGTTCTAGCAGGGCTACTAGAATTCTGTTTCTCAGAAGCACCAGTGAGTATGAGATCA
TTGGCAACATCTCTGTCGTGGGCTTCTTTAGCTATCGGATACTACCTCAGCTCGGTGATA
GTGTCTATTGTCAATCGTGTAACAGGCATTTCAACGAACAAGCCATGGCTCGCGGGTAGT
AACTTGAATCACTACCATTTAGAGAGGTTCTACTGGCTAATGTGCATACTCAGTGCATTA
AACTTTATGCACTACTTATTCTGGGCAACAAAATACAAGTATACATCAGTCACGTCTAGT
AGATGTTAG