Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400045404
CDS Infomation

pacid=37443846 polypeptide=PGSC0003DMP400030763 locus=PGSC0003DMG400017617 ID=PGSC0003DMT400045404.v4.03 annot-version=v4.03
Sequence

ATGGTTTTGACCCAGTTCGCTAGACCTTATAATTTCTGCTCTTTTTTGAGTTTACCTGCT
ACCCCTTGTAAAATTTTTGTCCTAAACCCAAGAAAAAGAGTTCATTTTCTGAGAAAATCT
GGGGGTTTTGAACTTGTTTTGGGTAAAAAGATGTGTTCTTTGAAGTTTGTTGAGCTAATT
AGAAAGGGAAAAGAAGAGCATAGTGTATGTTGTTGTTGCTGTGGAGAAGGGTCGCAAAGT
GAAGGTGATATGAAGTTAGAGGCTGACATTTTAGCATTTATGGAGAAGTCTCAGAACCCA
GATGCATTTCCAAGTAGGAAAGATTTGGAAAAAGCAGGAAGAGTTGATTTGATTGAGGCT
ATTAGGAATAGGGGTGGATGGTATTCGTTCGGTTGGGACTCAGAAGAGGAACCTCCCACT
GACCAAGAAAATGTTCCTGAGGCTGAGGAAATGGATTTTGATATTGAGGAGTTACGAAGA
AGAGTTGAGAAATATCAAGAAAGTGATTCTGGTTCCGATTTTTCGTCTGGGGATTCTTCT
CAGCCAGCTTCCTCATCTGGTAGATCACTAGAAGCTGTGGTTGAGGAAGATAGCGCGGTT
GAAGGGATATTGAACCGATTAGAGAAAGAGAGAATCTCATCTCTTGGTATTAATACTAGC
AAATATGGATATGGAGCTAATCATTCAAGTAGGGATAACATTGATGACAGAAGCTCTGGA
ACCACTACTACAGGTAGAGATCCATACAGGACTGACCTGGGAAAAAATGGAAGCCTCACG
ACATGTAGCCCCAAGAAAGGCGGTTTAAGTGATTCAGGAGGTCAGCTTAACCACAAATAC
ACGCCAGATATGTGGAGATCATGGAGCACTCAACGTGCATGCCCTGAAGGCACAGATTTT
GAAGTTGGTGAGGTAGATTTGGATAAGAGACCAAATGGAGGTAAAACTGAAACTTCAAGA
GATGATGTATTTACCGTCAAAGAGAATAGTTCTGAAACTCCGGAAAGATGGATATATAAC
AACCATAATGATATAAGTACTCGTCTTCAGCATTTAGAGCTTGAGCTATCCTCAACACTT
CGCTCCCTGAGATCCAAGAGCCAAGAGTTCAGTTCAATGGAGGTTCTTGGAAAATCCCGT
AGTGATTTTCAGAAGCTTTTGGATGCACGGGAGTTCCAGGAGAATGATGTCATAAATGCT
CAGAAGAGATTGCGGTCCATACGTGCAAAACTTGCAATACTTGAGGGGAAGGTGGCGTTA
ACATTGACTGATGCAGAGAAATTGCTGGCAAAGAAGCAGAAGAGGATTGATGGTGCTAGG
AAAGCTTTACAGTTTCTTCGCACTACTCAGATTGTTTGGCATAACTCTGCCTCAGAGGTT
CTTCTAACAGGCTCTTTTGATGGATGGACAACTCAGAGGAAGATGGAGAAATTGCGCACT
GGTGTTTTTTCTGTTAGCCTAAAGTTGTACCCAGGCAGCTATGAGATCAAATTTATTGTT
GATGGCATATGGAAGGTTGATCCTTTGAGGCCTGTTGTTCACAACAATGGCCATGAAAAT
AATCTTCTCATTGTCACATAA

Peptide Sequence

PEP ID

PGSC0003DMP400030763
PEP Infomation

pacid=37443846 transcript=PGSC0003DMT400045404 locus=PGSC0003DMG400017617 ID=PGSC0003DMT400045404.v4.03 annot-version=v4.03
Sequence

MVLTQFARPYNFCSFLSLPATPCKIFVLNPRKRVHFLRKSGGFELVLGKKMCSLKFVELI
RKGKEEHSVCCCCCGEGSQSEGDMKLEADILAFMEKSQNPDAFPSRKDLEKAGRVDLIEA
IRNRGGWYSFGWDSEEEPPTDQENVPEAEEMDFDIEELRRRVEKYQESDSGSDFSSGDSS
QPASSSGRSLEAVVEEDSAVEGILNRLEKERISSLGINTSKYGYGANHSSRDNIDDRSSG
TTTTGRDPYRTDLGKNGSLTTCSPKKGGLSDSGGQLNHKYTPDMWRSWSTQRACPEGTDF
EVGEVDLDKRPNGGKTETSRDDVFTVKENSSETPERWIYNNHNDISTRLQHLELELSSTL
RSLRSKSQEFSSMEVLGKSRSDFQKLLDAREFQENDVINAQKRLRSIRAKLAILEGKVAL
TLTDAEKLLAKKQKRIDGARKALQFLRTTQIVWHNSASEVLLTGSFDGWTTQRKMEKLRT
GVFSVSLKLYPGSYEIKFIVDGIWKVDPLRPVVHNNGHENNLLIVT*

Transcript Sequence

Transcript ID

PGSC0003DMT400045404
Transcript Infomation

pacid=37443846 locus=PGSC0003DMG400017617 ID=PGSC0003DMT400045404.v4.03 annot-version=v4.03
Sequence

ATGGTTTTGACCCAGTTCGCTAGACCTTATAATTTCTGCTCTTTTTTGAGTTTACCTGCT
ACCCCTTGTAAAATTTTTGTCCTAAACCCAAGAAAAAGAGTTCATTTTCTGAGAAAATCT
GGGGGTTTTGAACTTGTTTTGGGTAAAAAGATGTGTTCTTTGAAGTTTGTTGAGCTAATT
AGAAAGGGAAAAGAAGAGCATAGTGTATGTTGTTGTTGCTGTGGAGAAGGGTCGCAAAGT
GAAGGTGATATGAAGTTAGAGGCTGACATTTTAGCATTTATGGAGAAGTCTCAGAACCCA
GATGCATTTCCAAGTAGGAAAGATTTGGAAAAAGCAGGAAGAGTTGATTTGATTGAGGCT
ATTAGGAATAGGGGTGGATGGTATTCGTTCGGTTGGGACTCAGAAGAGGAACCTCCCACT
GACCAAGAAAATGTTCCTGAGGCTGAGGAAATGGATTTTGATATTGAGGAGTTACGAAGA
AGAGTTGAGAAATATCAAGAAAGTGATTCTGGTTCCGATTTTTCGTCTGGGGATTCTTCT
CAGCCAGCTTCCTCATCTGGTAGATCACTAGAAGCTGTGGTTGAGGAAGATAGCGCGGTT
GAAGGGATATTGAACCGATTAGAGAAAGAGAGAATCTCATCTCTTGGTATTAATACTAGC
AAATATGGATATGGAGCTAATCATTCAAGTAGGGATAACATTGATGACAGAAGCTCTGGA
ACCACTACTACAGGTAGAGATCCATACAGGACTGACCTGGGAAAAAATGGAAGCCTCACG
ACATGTAGCCCCAAGAAAGGCGGTTTAAGTGATTCAGGAGGTCAGCTTAACCACAAATAC
ACGCCAGATATGTGGAGATCATGGAGCACTCAACGTGCATGCCCTGAAGGCACAGATTTT
GAAGTTGGTGAGGTAGATTTGGATAAGAGACCAAATGGAGGTAAAACTGAAACTTCAAGA
GATGATGTATTTACCGTCAAAGAGAATAGTTCTGAAACTCCGGAAAGATGGATATATAAC
AACCATAATGATATAAGTACTCGTCTTCAGCATTTAGAGCTTGAGCTATCCTCAACACTT
CGCTCCCTGAGATCCAAGAGCCAAGAGTTCAGTTCAATGGAGGTTCTTGGAAAATCCCGT
AGTGATTTTCAGAAGCTTTTGGATGCACGGGAGTTCCAGGAGAATGATGTCATAAATGCT
CAGAAGAGATTGCGGTCCATACGTGCAAAACTTGCAATACTTGAGGGGAAGGTGGCGTTA
ACATTGACTGATGCAGAGAAATTGCTGGCAAAGAAGCAGAAGAGGATTGATGGTGCTAGG
AAAGCTTTACAGTTTCTTCGCACTACTCAGATTGTTTGGCATAACTCTGCCTCAGAGGTT
CTTCTAACAGGCTCTTTTGATGGATGGACAACTCAGAGGAAGATGGAGAAATTGCGCACT
GGTGTTTTTTCTGTTAGCCTAAAGTTGTACCCAGGCAGCTATGAGATCAAATTTATTGTT
GATGGCATATGGAAGGTTGATCCTTTGAGGCCTGTTGTTCACAACAATGGCCATGAAAAT
AATCTTCTCATTGTCACATAA