Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400045398
CDS Infomation

pacid=37443328 polypeptide=PGSC0003DMP400030760 locus=PGSC0003DMG400017615 ID=PGSC0003DMT400045398.v4.03 annot-version=v4.03
Sequence

ATGGGAGTTGATTACTATAACTTACTGAAAGTATCTAGGAATGCGAGTGAAGAAGATTTA
AAGAGATCGTACAAGAGATTAGCGATGAAATGGCATCCGGATAAGAATAGTCAGAACAAT
AAGGAAGCAGAAGCGAAATTCAAGCAGATTTCTGAGGCGTATGATGTGCTTAGTGATCCT
CAGAAGCGTCAGATCTATGATTTGTACGGTGAGGATGCGTTGAAGTCTGGTCAATTTACT
TCGGCGTCGCCGACTAGTGCTGGTAGTGGGACTGGTAATGGTAGAGGGTTTAGATTCAAT
ACGCGTGATGCGGAGGATATTTTTGCTGAGATTTTTGGTGGATCAGAGGGGTTTAGTAGT
GGTTCTGGTGCCGGAGTTGGTCGGAAAGCGGCGCCGGTGGAGAATAAACTTCCGTGTAGC
TTGGAGGAGCTTTACAAAGGATCTAGAAGGAAAATGAAGATTTCAAGGATTCTTCTTGAT
GATTCTGGTAAGCCAACAACTGTTGAAGAGGTCTTAGCAATACACATCAAACCAGGTTGG
AAGAAAGGCACAAAAATAACTTTTCCAGAGAAAGGGGACTATGAATATGGAGCTGCCCCT
GGTGATCTCATTTTTGTGATAGATGAAAAGCCACATGCTCTCTTCAAGAGGGATGGAAAT
GATCTAGTCATGAATCAGAAAATATCTTTACTAGATGCTCTCACTGGAAAAACTATCAGC
TTGACTACTTTAGACGGAAGGGAACTCACAATACCAATCAAAGAGATTGTCAAACCAGGA
CAGGAGCTGATAATCCAAAATGAGGGAATGCCAATATCAAAGGAACGTGGCAAAAAAGGG
AATCTGAAGATCAAGTTTGACATTAAATTTCCATCAAGGCTAAATGCAGATCAGAAATCT
GATCTCAGAAGGGTGCTATGCAGGAGCATTGACTAG

Peptide Sequence

PEP ID

PGSC0003DMP400030760
PEP Infomation

pacid=37443328 transcript=PGSC0003DMT400045398 locus=PGSC0003DMG400017615 ID=PGSC0003DMT400045398.v4.03 annot-version=v4.03
Sequence

MGVDYYNLLKVSRNASEEDLKRSYKRLAMKWHPDKNSQNNKEAEAKFKQISEAYDVLSDP
QKRQIYDLYGEDALKSGQFTSASPTSAGSGTGNGRGFRFNTRDAEDIFAEIFGGSEGFSS
GSGAGVGRKAAPVENKLPCSLEELYKGSRRKMKISRILLDDSGKPTTVEEVLAIHIKPGW
KKGTKITFPEKGDYEYGAAPGDLIFVIDEKPHALFKRDGNDLVMNQKISLLDALTGKTIS
LTTLDGRELTIPIKEIVKPGQELIIQNEGMPISKERGKKGNLKIKFDIKFPSRLNADQKS
DLRRVLCRSID*

Transcript Sequence

Transcript ID

PGSC0003DMT400045398
Transcript Infomation

pacid=37443328 locus=PGSC0003DMG400017615 ID=PGSC0003DMT400045398.v4.03 annot-version=v4.03
Sequence

ATGGGAGTTGATTACTATAACTTACTGAAAGTATCTAGGAATGCGAGTGAAGAAGATTTA
AAGAGATCGTACAAGAGATTAGCGATGAAATGGCATCCGGATAAGAATAGTCAGAACAAT
AAGGAAGCAGAAGCGAAATTCAAGCAGATTTCTGAGGCGTATGATGTGCTTAGTGATCCT
CAGAAGCGTCAGATCTATGATTTGTACGGTGAGGATGCGTTGAAGTCTGGTCAATTTACT
TCGGCGTCGCCGACTAGTGCTGGTAGTGGGACTGGTAATGGTAGAGGGTTTAGATTCAAT
ACGCGTGATGCGGAGGATATTTTTGCTGAGATTTTTGGTGGATCAGAGGGGTTTAGTAGT
GGTTCTGGTGCCGGAGTTGGTCGGAAAGCGGCGCCGGTGGAGAATAAACTTCCGTGTAGC
TTGGAGGAGCTTTACAAAGGATCTAGAAGGAAAATGAAGATTTCAAGGATTCTTCTTGAT
GATTCTGGTAAGCCAACAACTGTTGAAGAGGTCTTAGCAATACACATCAAACCAGGTTGG
AAGAAAGGCACAAAAATAACTTTTCCAGAGAAAGGGGACTATGAATATGGAGCTGCCCCT
GGTGATCTCATTTTTGTGATAGATGAAAAGCCACATGCTCTCTTCAAGAGGGATGGAAAT
GATCTAGTCATGAATCAGAAAATATCTTTACTAGATGCTCTCACTGGAAAAACTATCAGC
TTGACTACTTTAGACGGAAGGGAACTCACAATACCAATCAAAGAGATTGTCAAACCAGGA
CAGGAGCTGATAATCCAAAATGAGGGAATGCCAATATCAAAGGAACGTGGCAAAAAAGGG
AATCTGAAGATCAAGTTTGACATTAAATTTCCATCAAGGCTAAATGCAGATCAGAAATCT
GATCTCAGAAGGGTGCTATGCAGGAGCATTGACTAG