Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400045367
CDS Infomation

pacid=37479085 polypeptide=PGSC0003DMP400030746 locus=PGSC0003DMG400017605 ID=PGSC0003DMT400045367.v4.03 annot-version=v4.03
Sequence

ATGGCATTTCTAAGACTTGGCTCCAAATCTGAGGCCTTCCGTCGTGAAGGCCAAGCTTGG
CATTGCACATCAGGTCTTCCCAGTGATGTTACAATTGAAATTGGAGAAATGTCCTTTTAT
CTACACAAGTTCCCATTGATATCAAGAAGTGGACTACTAGCAAAGCTAGTTAAAGATTCA
TCAAACGACGACGTATCAGTTAGCGTCCTGCAGCTCAATGACATACCTGGTGGTGCTAAA
GCATTTGAGCTAGTAGCCAAATTCTGTTATGGTGTCAAAATAGAAATCACTCCTTTGAAT
ATAGTGAGCCTTAGATGTGCATCAGAGTATCTGCAAATGACAGATGAATATGGTGAGACA
AATCTCATTGCACAAACAGAATCTTTTCTTAACGACGTTTTTGGGAATTGGACAGATACT
ATAAAAGCTCTTGAAACATGTGAAGAAGTTCTACCACATGCTGAAGAGCTTCATATTGTG
TCCAGATGCATAAATTCCTTAGCAATGAAAGCTTGTACCGATACGAAGTTGTTTAACTGG
CCTGTGTCTGAAAATGGTCATGAGGATACCACAGACGTGGAGGTGTGGAATGGTATATGC
ACGGGATCCAAGACACAGCCGATGACAGATGATTGGTGGTATGAAGACGTGTCGTTTCTT
AGCTTACCTCTGTATAAACGGTTGATTCAGGCGGTTGAAGCTGGAGGAATGAGGCCGGAA
AATGTAGCAGGTGCAGTTGTGTTTTATGCAAAGAAATATATTCCTTTGATGAATAGACAA
GCAAGTTTCAAGGATGCTACTAGCCATACTAATAAATCAGGATCAACAATTTCAACTCCA
TCAGAAGCAGACCAAAGGGCACTTTTAGAGGAGATAATGGAGTTGTTGCCTAATCAGAAA
GGAGTAACAGACACCAGGTTTCTTCTTAGGCTGCTCCGTAGCGCTATGATGCTACAAGCA
AGTCCATCTTGCAGGGAGAATTTGGAGAGAAGAGTGGGATTGCAGTTAGATCAAGCTGCA
CTAGATGACTTGTTGATACCAAATATGGGATATTCAGTAGAAACTTTATATGATATAGAC
TGTTTTCAGAGAATTTTGGATCATTTTATGTCAATAGACCAGGCTTCTTCTGCACCATCT
CCATGTATTATGGAAGAAAACCAATTGATGGAAGGTTCAACTTCCTTGACTTCGCTAACA
AGGGTAGCAAATCTAGTGGATTCATATCTTTCTGAGGTCGCGCCTGATGTTAATTACAAG
TTCCCTAAATTTCAGTCTCTTGCTGCTACAATCCCGGATTTTGCAAGGCCACTTACTGAT
GGTATCTATCGTGCAATTGATATATATTTGAAGGCACATCCTTGGCTCACAGACTCAGAA
AGAGAGCAAATCTGCAGACTAATGAATTGCCAGAAGCTCTCGTTGGAAGCTTGCACACAC
GCTGCTCAAAACGAGAGGCTACCTCTTAGGGTCATAGTTCAAGTCTTGTTCTTTGAACAA
CTTCGACTACGGACATCAATATCAGGATTGTTCTTTGTCTCAGATAATCTTGACAACTCC
CAAAGTACTACTCTTCATGGAGGGAACCGGAACACAAACACAGCAAATGGAAGAGGATCA
AGTATCGATGACATGAGGGAGCGTGTTGCAGAACTAGAAAAAGAGTGTAACAGCATGAAA
CAGGAGTTTAAAAAGGTGGTAAAAACAAAGAAAAAGTGGAATGTCTTTTGTGGAAGAAAA
TCTGAGTGTGACTTGAATTCAGTAAATCCCAGCAAGTTACAACCTCAACATGTTAATGAG
CGTAAAAATCAAAAGAATGGAAGCTCAAGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400030746
PEP Infomation

pacid=37479085 transcript=PGSC0003DMT400045367 locus=PGSC0003DMG400017605 ID=PGSC0003DMT400045367.v4.03 annot-version=v4.03
Sequence

MAFLRLGSKSEAFRREGQAWHCTSGLPSDVTIEIGEMSFYLHKFPLISRSGLLAKLVKDS
SNDDVSVSVLQLNDIPGGAKAFELVAKFCYGVKIEITPLNIVSLRCASEYLQMTDEYGET
NLIAQTESFLNDVFGNWTDTIKALETCEEVLPHAEELHIVSRCINSLAMKACTDTKLFNW
PVSENGHEDTTDVEVWNGICTGSKTQPMTDDWWYEDVSFLSLPLYKRLIQAVEAGGMRPE
NVAGAVVFYAKKYIPLMNRQASFKDATSHTNKSGSTISTPSEADQRALLEEIMELLPNQK
GVTDTRFLLRLLRSAMMLQASPSCRENLERRVGLQLDQAALDDLLIPNMGYSVETLYDID
CFQRILDHFMSIDQASSAPSPCIMEENQLMEGSTSLTSLTRVANLVDSYLSEVAPDVNYK
FPKFQSLAATIPDFARPLTDGIYRAIDIYLKAHPWLTDSEREQICRLMNCQKLSLEACTH
AAQNERLPLRVIVQVLFFEQLRLRTSISGLFFVSDNLDNSQSTTLHGGNRNTNTANGRGS
SIDDMRERVAELEKECNSMKQEFKKVVKTKKKWNVFCGRKSECDLNSVNPSKLQPQHVNE
RKNQKNGSSR*

Transcript Sequence

Transcript ID

PGSC0003DMT400045367
Transcript Infomation

pacid=37479085 locus=PGSC0003DMG400017605 ID=PGSC0003DMT400045367.v4.03 annot-version=v4.03
Sequence

ATGGCATTTCTAAGACTTGGCTCCAAATCTGAGGCCTTCCGTCGTGAAGGCCAAGCTTGG
CATTGCACATCAGGTCTTCCCAGTGATGTTACAATTGAAATTGGAGAAATGTCCTTTTAT
CTACACAAGTTCCCATTGATATCAAGAAGTGGACTACTAGCAAAGCTAGTTAAAGATTCA
TCAAACGACGACGTATCAGTTAGCGTCCTGCAGCTCAATGACATACCTGGTGGTGCTAAA
GCATTTGAGCTAGTAGCCAAATTCTGTTATGGTGTCAAAATAGAAATCACTCCTTTGAAT
ATAGTGAGCCTTAGATGTGCATCAGAGTATCTGCAAATGACAGATGAATATGGTGAGACA
AATCTCATTGCACAAACAGAATCTTTTCTTAACGACGTTTTTGGGAATTGGACAGATACT
ATAAAAGCTCTTGAAACATGTGAAGAAGTTCTACCACATGCTGAAGAGCTTCATATTGTG
TCCAGATGCATAAATTCCTTAGCAATGAAAGCTTGTACCGATACGAAGTTGTTTAACTGG
CCTGTGTCTGAAAATGGTCATGAGGATACCACAGACGTGGAGGTGTGGAATGGTATATGC
ACGGGATCCAAGACACAGCCGATGACAGATGATTGGTGGTATGAAGACGTGTCGTTTCTT
AGCTTACCTCTGTATAAACGGTTGATTCAGGCGGTTGAAGCTGGAGGAATGAGGCCGGAA
AATGTAGCAGGTGCAGTTGTGTTTTATGCAAAGAAATATATTCCTTTGATGAATAGACAA
GCAAGTTTCAAGGATGCTACTAGCCATACTAATAAATCAGGATCAACAATTTCAACTCCA
TCAGAAGCAGACCAAAGGGCACTTTTAGAGGAGATAATGGAGTTGTTGCCTAATCAGAAA
GGAGTAACAGACACCAGGTTTCTTCTTAGGCTGCTCCGTAGCGCTATGATGCTACAAGCA
AGTCCATCTTGCAGGGAGAATTTGGAGAGAAGAGTGGGATTGCAGTTAGATCAAGCTGCA
CTAGATGACTTGTTGATACCAAATATGGGATATTCAGTAGAAACTTTATATGATATAGAC
TGTTTTCAGAGAATTTTGGATCATTTTATGTCAATAGACCAGGCTTCTTCTGCACCATCT
CCATGTATTATGGAAGAAAACCAATTGATGGAAGGTTCAACTTCCTTGACTTCGCTAACA
AGGGTAGCAAATCTAGTGGATTCATATCTTTCTGAGGTCGCGCCTGATGTTAATTACAAG
TTCCCTAAATTTCAGTCTCTTGCTGCTACAATCCCGGATTTTGCAAGGCCACTTACTGAT
GGTATCTATCGTGCAATTGATATATATTTGAAGGCACATCCTTGGCTCACAGACTCAGAA
AGAGAGCAAATCTGCAGACTAATGAATTGCCAGAAGCTCTCGTTGGAAGCTTGCACACAC
GCTGCTCAAAACGAGAGGCTACCTCTTAGGGTCATAGTTCAAGTCTTGTTCTTTGAACAA
CTTCGACTACGGACATCAATATCAGGATTGTTCTTTGTCTCAGATAATCTTGACAACTCC
CAAAGTACTACTCTTCATGGAGGGAACCGGAACACAAACACAGCAAATGGAAGAGGATCA
AGTATCGATGACATGAGGGAGCGTGTTGCAGAACTAGAAAAAGAGTGTAACAGCATGAAA
CAGGAGTTTAAAAAGGTGGTAAAAACAAAGAAAAAGTGGAATGTCTTTTGTGGAAGAAAA
TCTGAGTGTGACTTGAATTCAGTAAATCCCAGCAAGTTACAACCTCAACATGTTAATGAG
CGTAAAAATCAAAAGAATGGAAGCTCAAGATGA