Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400045337
CDS Infomation

pacid=37478265 polypeptide=PGSC0003DMP400030722 locus=PGSC0003DMG400017592 ID=PGSC0003DMT400045337.v4.03 annot-version=v4.03
Sequence

ATGTCGGAGCAGCTTGAGGACTCTGAGAAACAACTACTTGAACTCTCAGAATCTGAGGAA
GCTCGAATCCTGGAGCTACGCAAGCTATCACAGGATCGAGATCGAGCATGGGAATCTGAA
CTTGAGGCTGTCCAGAAGCAGCACAAATTCGACTCTTCTGCTTTAGGTTCTGCTATGAAT
GAAATCCAGAAGCTTAAAATTCAGCTGGACCGCGTGGCTGATTCTGAAGCCAATCAAGCT
CGACATGCTGAATCAGCTTACGCTGAGATTCAAAGCTTAAGGTTAGAACTTATGGAAACA
CTTACATTGGTTGAAAATTTGAGAGATCAGCTAAATGATAGCAAGGAATCTGAGGCTTGC
GCGCTTGAAGAAGTGAGTAAAGCACAGATGCAGCTGGAAGTGGCAAAGATGACCGAGGAT
ACTCTACGTTCTGAAGGTCTGAAAGCAATGGAGGCTTACAAATCCCTGTCGTTGGAGTTA
GAACAATCAAACAATCGAGTAGCTACATTGGAGGAACTTGTCAGTGAACTCCAAAGTGCT
CAAGATATCGAAAACATGAACTCTGCACAAGAAAACAGAGTTAATGTGGAAGCCGAGGAA
CTCAAAACCGAGCTGAGTAATCTACAAGTTGAGGTAAGTCAACTAAGAGCTGCATTAGAG
GTTTCGGAGACAAGATATCAGGAAGAATATATCCAGAGCACTTTGCAGATTAGAAGTGCT
TATGAGCTAGTGGAACAATCAAAATCTGAATCAATACAGAAAGAGGCTGAATGGGAGGCA
AAGTTAGAGGCTACAACAACTGACTTGGAAGAGTTAAAGGAGAAATTAATGAGCAAAGAA
GATGCACTACGAAGCATTTCAGACGAAAATAAGCATTTCAGTACATTAGATGCTGTACTG
AAGGAATCAGAGTCAACATTGGGAGTATTGAGAGCAAGTTTACTCGACAAAGAGACGGAG
TTGCAAAGTATAAAGGAAGAAAATGAGATACTGATGTCCGAAATAAAGAAGAGGGAAACT
GAGGGTAGCAAAGCAAATGATTCAGCTCTTGCCTTGGCAGAAGCCGCGAGAACTGCAGAA
AAAGAGGCATTGGTGAAGTTAGGACACTTGACTGAGGAAGCGGATAATAGTATTAGAAAG
GCAGCACGTGTGACCGAGCAGTTGGATGCAGCACAGAATGCCAACTTTGAGATGGAAGCA
GAGTTGAGGAGGTTAAAAGTGCAATCTGATCAGTGGAGGAAGGCTGCTGAAGCAGCTGCA
GCTATGCTTTCAACTGGAAACAACGGGAAATACACGGAGAGAACAGGTTCTTTAGATTAC
CACACTAAGCTGGATTCGCCATTATCTGAAGATACGGATGATGACTCGCCTAAGAAGAAG
AATGGAAACATGTTGAAAAAGATTGGTGTTTTGTTGAAAAAAGGCCAGAAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400030722
PEP Infomation

pacid=37478265 transcript=PGSC0003DMT400045337 locus=PGSC0003DMG400017592 ID=PGSC0003DMT400045337.v4.03 annot-version=v4.03
Sequence

MSEQLEDSEKQLLELSESEEARILELRKLSQDRDRAWESELEAVQKQHKFDSSALGSAMN
EIQKLKIQLDRVADSEANQARHAESAYAEIQSLRLELMETLTLVENLRDQLNDSKESEAC
ALEEVSKAQMQLEVAKMTEDTLRSEGLKAMEAYKSLSLELEQSNNRVATLEELVSELQSA
QDIENMNSAQENRVNVEAEELKTELSNLQVEVSQLRAALEVSETRYQEEYIQSTLQIRSA
YELVEQSKSESIQKEAEWEAKLEATTTDLEELKEKLMSKEDALRSISDENKHFSTLDAVL
KESESTLGVLRASLLDKETELQSIKEENEILMSEIKKRETEGSKANDSALALAEAARTAE
KEALVKLGHLTEEADNSIRKAARVTEQLDAAQNANFEMEAELRRLKVQSDQWRKAAEAAA
AMLSTGNNGKYTERTGSLDYHTKLDSPLSEDTDDDSPKKKNGNMLKKIGVLLKKGQK*

Transcript Sequence

Transcript ID

PGSC0003DMT400045337
Transcript Infomation

pacid=37478265 locus=PGSC0003DMG400017592 ID=PGSC0003DMT400045337.v4.03 annot-version=v4.03
Sequence

ATGTCGGAGCAGCTTGAGGACTCTGAGAAACAACTACTTGAACTCTCAGAATCTGAGGAA
GCTCGAATCCTGGAGCTACGCAAGCTATCACAGGATCGAGATCGAGCATGGGAATCTGAA
CTTGAGGCTGTCCAGAAGCAGCACAAATTCGACTCTTCTGCTTTAGGTTCTGCTATGAAT
GAAATCCAGAAGCTTAAAATTCAGCTGGACCGCGTGGCTGATTCTGAAGCCAATCAAGCT
CGACATGCTGAATCAGCTTACGCTGAGATTCAAAGCTTAAGGTTAGAACTTATGGAAACA
CTTACATTGGTTGAAAATTTGAGAGATCAGCTAAATGATAGCAAGGAATCTGAGGCTTGC
GCGCTTGAAGAAGTGAGTAAAGCACAGATGCAGCTGGAAGTGGCAAAGATGACCGAGGAT
ACTCTACGTTCTGAAGGTCTGAAAGCAATGGAGGCTTACAAATCCCTGTCGTTGGAGTTA
GAACAATCAAACAATCGAGTAGCTACATTGGAGGAACTTGTCAGTGAACTCCAAAGTGCT
CAAGATATCGAAAACATGAACTCTGCACAAGAAAACAGAGTTAATGTGGAAGCCGAGGAA
CTCAAAACCGAGCTGAGTAATCTACAAGTTGAGGTAAGTCAACTAAGAGCTGCATTAGAG
GTTTCGGAGACAAGATATCAGGAAGAATATATCCAGAGCACTTTGCAGATTAGAAGTGCT
TATGAGCTAGTGGAACAATCAAAATCTGAATCAATACAGAAAGAGGCTGAATGGGAGGCA
AAGTTAGAGGCTACAACAACTGACTTGGAAGAGTTAAAGGAGAAATTAATGAGCAAAGAA
GATGCACTACGAAGCATTTCAGACGAAAATAAGCATTTCAGTACATTAGATGCTGTACTG
AAGGAATCAGAGTCAACATTGGGAGTATTGAGAGCAAGTTTACTCGACAAAGAGACGGAG
TTGCAAAGTATAAAGGAAGAAAATGAGATACTGATGTCCGAAATAAAGAAGAGGGAAACT
GAGGGTAGCAAAGCAAATGATTCAGCTCTTGCCTTGGCAGAAGCCGCGAGAACTGCAGAA
AAAGAGGCATTGGTGAAGTTAGGACACTTGACTGAGGAAGCGGATAATAGTATTAGAAAG
GCAGCACGTGTGACCGAGCAGTTGGATGCAGCACAGAATGCCAACTTTGAGATGGAAGCA
GAGTTGAGGAGGTTAAAAGTGCAATCTGATCAGTGGAGGAAGGCTGCTGAAGCAGCTGCA
GCTATGCTTTCAACTGGAAACAACGGGAAATACACGGAGAGAACAGGTTCTTTAGATTAC
CACACTAAGCTGGATTCGCCATTATCTGAAGATACGGATGATGACTCGCCTAAGAAGAAG
AATGGAAACATGTTGAAAAAGATTGGTGTTTTGTTGAAAAAAGGCCAGAAGTAG