Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400045310
CDS Infomation

pacid=37454430 polypeptide=PGSC0003DMP400030701 locus=PGSC0003DMG400017574 ID=PGSC0003DMT400045310.v4.03 annot-version=v4.03
Sequence

ATGGGTTATACTAAGGAGCAATTGCTTGCCCGTTTACAGGAGCTTCAAATTGATTTCACC
AAACATGAACACCCAGTGGTTTTGACAGTTGAAGCACAGGCAAAACATGTTGGGCATCTG
AATGGGGCATTGAGTAAAAACTTATTCTTGAAGGATAAGAAACACAGGTTCTATGTTGTT
TCTGCAATGGCAAAAACCAATGTAGATTTGAAAGTTTTGTCTCAGAGGCTTGGTTTGGGA
AAAGGAGGGCTAAGAATGGCTCCTGAAGAAGCACTTGGAGAAGTACTTCAGGTGCCGCTT
GGTTGTGTCACCCCTTTTGCACTTGTAAATGAATCAGCAAGGTGTGTTTCCTTGTTATTG
GATCAGGGATTTAAAACACAGGAATGCTGCTTCTTCCACCCACTCTCAAATGATACAACA
ATTGCTCTTAATGCTCGTGGTCTTGATAAGTTTCTGAGTTCCTTAGGAAAGCAACCGGTC
TATGTGGACCTTGAGGCTAATCCTCCAGTAGGAAAGGATCAACCTCCTGATCTAGCGTCT
CTTGTTCCATCTGATGCAATTGCCATACCAGGTCAACCTGACAAAGCAGCTCCTTCGCAA
GTTTCTGACATGAATCATGCCCCTGTCAATAACAAGTCAACTGGAGTTTCAGCTAAAGCA
GTTAAGCCATCAACTGATGTACGGAAGGAGAAACTATCAAATGCAGTTAGCTTATCAAAC
TCGTTTGCTGATCCCGAAAAATATGTTGAAGACTTTATAGAGAGAACATCATCTCTTGTT
CTTTCAGAGATAACGGAGGAGAATGTAAAGCAATATGGTGAGAAACTCGGTGAAGTCATA
TCAAATACAATTAGGAAAAAACTTGCAACAGAGCTAAAGAGCACAGCTACAATGTTCAAG
AACACTGCGTATTCTGAAGGTTTTTCTGCTGGTACTCGCCAACAACCAAAGCGACTTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400030701
PEP Infomation

pacid=37454430 transcript=PGSC0003DMT400045310 locus=PGSC0003DMG400017574 ID=PGSC0003DMT400045310.v4.03 annot-version=v4.03
Sequence

MGYTKEQLLARLQELQIDFTKHEHPVVLTVEAQAKHVGHLNGALSKNLFLKDKKHRFYVV
SAMAKTNVDLKVLSQRLGLGKGGLRMAPEEALGEVLQVPLGCVTPFALVNESARCVSLLL
DQGFKTQECCFFHPLSNDTTIALNARGLDKFLSSLGKQPVYVDLEANPPVGKDQPPDLAS
LVPSDAIAIPGQPDKAAPSQVSDMNHAPVNNKSTGVSAKAVKPSTDVRKEKLSNAVSLSN
SFADPEKYVEDFIERTSSLVLSEITEENVKQYGEKLGEVISNTIRKKLATELKSTATMFK
NTAYSEGFSAGTRQQPKRL*

Transcript Sequence

Transcript ID

PGSC0003DMT400045310
Transcript Infomation

pacid=37454430 locus=PGSC0003DMG400017574 ID=PGSC0003DMT400045310.v4.03 annot-version=v4.03
Sequence

ATGGGTTATACTAAGGAGCAATTGCTTGCCCGTTTACAGGAGCTTCAAATTGATTTCACC
AAACATGAACACCCAGTGGTTTTGACAGTTGAAGCACAGGCAAAACATGTTGGGCATCTG
AATGGGGCATTGAGTAAAAACTTATTCTTGAAGGATAAGAAACACAGGTTCTATGTTGTT
TCTGCAATGGCAAAAACCAATGTAGATTTGAAAGTTTTGTCTCAGAGGCTTGGTTTGGGA
AAAGGAGGGCTAAGAATGGCTCCTGAAGAAGCACTTGGAGAAGTACTTCAGGTGCCGCTT
GGTTGTGTCACCCCTTTTGCACTTGTAAATGAATCAGCAAGGTGTGTTTCCTTGTTATTG
GATCAGGGATTTAAAACACAGGAATGCTGCTTCTTCCACCCACTCTCAAATGATACAACA
ATTGCTCTTAATGCTCGTGGTCTTGATAAGTTTCTGAGTTCCTTAGGAAAGCAACCGGTC
TATGTGGACCTTGAGGCTAATCCTCCAGTAGGAAAGGATCAACCTCCTGATCTAGCGTCT
CTTGTTCCATCTGATGCAATTGCCATACCAGGTCAACCTGACAAAGCAGCTCCTTCGCAA
GTTTCTGACATGAATCATGCCCCTGTCAATAACAAGTCAACTGGAGTTTCAGCTAAAGCA
GTTAAGCCATCAACTGATGTACGGAAGGAGAAACTATCAAATGCAGTTAGCTTATCAAAC
TCGTTTGCTGATCCCGAAAAATATGTTGAAGACTTTATAGAGAGAACATCATCTCTTGTT
CTTTCAGAGATAACGGAGGAGAATGTAAAGCAATATGGTGAGAAACTCGGTGAAGTCATA
TCAAATACAATTAGGAAAAAACTTGCAACAGAGCTAAAGAGCACAGCTACAATGTTCAAG
AACACTGCGTATTCTGAAGGTTTTTCTGCTGGTACTCGCCAACAACCAAAGCGACTTTAA