Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400045302
CDS Infomation

pacid=37450626 polypeptide=PGSC0003DMP400030696 locus=PGSC0003DMG400017570 ID=PGSC0003DMT400045302.v4.03 annot-version=v4.03
Sequence

ATGTCCGCTATTGCTACTTCTGCTGCTCTCTCTTTTCCTTTCTCTTTTTGCCGCTCAACT
AAGACTTATACTAGAAAGTGTTTCAAAGGTGGTTTTGGAGTGTTTGCAGTGTATGAGGAG
GCAGCGGGTATTGAGTTAACAAACAAGAAAAACTCCTGGTTGACAATCTTTGATGTGGAA
GATCCAAGGTCAAAATTCCCTCAGTCTAAAGGGAAGTTCCTGGATGCAAATCAAGCTTTA
GAAGTTGCTAGATTTGATATACAATATTGTGATTGGCGAGCTCGTCAAGACGTACTTACA
ATAATGCTCCTGCACGAAAAGGTTGTGGAAGTATTGAATCCTCTAGCACGGGAGTATAAA
TCTATTGGAACTGTGAAGAAGGAACTCGCGGATTTACAAGAAGCACTTTCTCAGGCCCAT
AAAGAGGTACATATATCTGAGGTGCGGGTTTCTGCTGCTTTAGATAAGCTAGCTTACATG
GAAGCGTTGGTTAATGATAGGCTTCTACCAGAGAGGAGTACAGAAGAATCAGTTTCCACG
TCTTCATCCCCCGGTACATCTACAGTATCTAGAGATAATGTTAAAAGCAAGCAGCCTAGG
AGAACCCTCAATGTGTCCGGTCCTGTTCAAGAATACAGCCCCCATTTGAAGAATTTCTGG
TATCCTGTTGCTTTCTCCGCTGATATTAAGGATGACACCATGATACCAATTGAATGCTTT
GAGGAACCATGGGTGATTTTTCGTGGGAAAGATGGAAAACCTGGATGTGTCCGGAACACA
TGTGCACATAGAGCCTGCCCCCTTCATTTGGGTTCAGTGAAAGAGGGTCGAATCCAATGT
CCTTATCATGGGTGGGAATATTCAACAGACGGGAAATGTGAGAAAATGCCATCAACAAAA
TTTCTGAATGTCAAGATCAAATCTCTGCCATGCTTTGAGCAAGAAGGAATGATATGGATT
TGGCCTGGAAATGATCCTCCTACAGCCACTCTTCCTTCTTTACTTCCACCTTCTGGATTT
CAAATCCATGCAGAGATAGTGATGGAACTTCCAGTTGAACATGGGTTGCTTTTAGACAAT
CTGTTGGATCTTGCCCATGCGCCTTTCACCCATACATCTACGTTTGCTAGAGGATGGAGT
GTCCCAAGCTTTGTAAATTTTTTGACTCCGGCATCTGGTCTGCAAGGATATTGGGATCCT
TATCCAATAGATATGGAATTTCGCCCACCTTGTATGGTTCTATCAACCATTGGAATCTCA
AAGCCAGGTAAATTGGAGGGGCAGAGCACCAAAGAGTGCTCTACACACCTTCACCAACTT
CATGTATGTTTACCTGCATCTCGACAGAAGACAAGGTTGCTATATAGGATGTCACTGGAT
TTTGCTCCCATATTAAAACACATGCCTTTTATGCAATATGTGTGGAGGCATTTTGCTGAA
CAGGTTTTAAATGAAGACCTACGGCTTGTGATTGGTCAACAAGACCGGATGCTCAAGGGT
GCTAACATTTGGAACCTGCCTGTATCATACGATAAGCTAGGAGTGAGGTATAGAATATGG
AGAGATGCTGTAGAGAGTGGAGTAAAGCAATTGCCATTCAGCAAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400030696
PEP Infomation

pacid=37450626 transcript=PGSC0003DMT400045302 locus=PGSC0003DMG400017570 ID=PGSC0003DMT400045302.v4.03 annot-version=v4.03
Sequence

MSAIATSAALSFPFSFCRSTKTYTRKCFKGGFGVFAVYEEAAGIELTNKKNSWLTIFDVE
DPRSKFPQSKGKFLDANQALEVARFDIQYCDWRARQDVLTIMLLHEKVVEVLNPLAREYK
SIGTVKKELADLQEALSQAHKEVHISEVRVSAALDKLAYMEALVNDRLLPERSTEESVST
SSSPGTSTVSRDNVKSKQPRRTLNVSGPVQEYSPHLKNFWYPVAFSADIKDDTMIPIECF
EEPWVIFRGKDGKPGCVRNTCAHRACPLHLGSVKEGRIQCPYHGWEYSTDGKCEKMPSTK
FLNVKIKSLPCFEQEGMIWIWPGNDPPTATLPSLLPPSGFQIHAEIVMELPVEHGLLLDN
LLDLAHAPFTHTSTFARGWSVPSFVNFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGIS
KPGKLEGQSTKECSTHLHQLHVCLPASRQKTRLLYRMSLDFAPILKHMPFMQYVWRHFAE
QVLNEDLRLVIGQQDRMLKGANIWNLPVSYDKLGVRYRIWRDAVESGVKQLPFSK*

Transcript Sequence

Transcript ID

PGSC0003DMT400045302
Transcript Infomation

pacid=37450626 locus=PGSC0003DMG400017570 ID=PGSC0003DMT400045302.v4.03 annot-version=v4.03
Sequence

ATGTCCGCTATTGCTACTTCTGCTGCTCTCTCTTTTCCTTTCTCTTTTTGCCGCTCAACT
AAGACTTATACTAGAAAGTGTTTCAAAGGTGGTTTTGGAGTGTTTGCAGTGTATGAGGAG
GCAGCGGGTATTGAGTTAACAAACAAGAAAAACTCCTGGTTGACAATCTTTGATGTGGAA
GATCCAAGGTCAAAATTCCCTCAGTCTAAAGGGAAGTTCCTGGATGCAAATCAAGCTTTA
GAAGTTGCTAGATTTGATATACAATATTGTGATTGGCGAGCTCGTCAAGACGTACTTACA
ATAATGCTCCTGCACGAAAAGGTTGTGGAAGTATTGAATCCTCTAGCACGGGAGTATAAA
TCTATTGGAACTGTGAAGAAGGAACTCGCGGATTTACAAGAAGCACTTTCTCAGGCCCAT
AAAGAGGTACATATATCTGAGGTGCGGGTTTCTGCTGCTTTAGATAAGCTAGCTTACATG
GAAGCGTTGGTTAATGATAGGCTTCTACCAGAGAGGAGTACAGAAGAATCAGTTTCCACG
TCTTCATCCCCCGGTACATCTACAGTATCTAGAGATAATGTTAAAAGCAAGCAGCCTAGG
AGAACCCTCAATGTGTCCGGTCCTGTTCAAGAATACAGCCCCCATTTGAAGAATTTCTGG
TATCCTGTTGCTTTCTCCGCTGATATTAAGGATGACACCATGATACCAATTGAATGCTTT
GAGGAACCATGGGTGATTTTTCGTGGGAAAGATGGAAAACCTGGATGTGTCCGGAACACA
TGTGCACATAGAGCCTGCCCCCTTCATTTGGGTTCAGTGAAAGAGGGTCGAATCCAATGT
CCTTATCATGGGTGGGAATATTCAACAGACGGGAAATGTGAGAAAATGCCATCAACAAAA
TTTCTGAATGTCAAGATCAAATCTCTGCCATGCTTTGAGCAAGAAGGAATGATATGGATT
TGGCCTGGAAATGATCCTCCTACAGCCACTCTTCCTTCTTTACTTCCACCTTCTGGATTT
CAAATCCATGCAGAGATAGTGATGGAACTTCCAGTTGAACATGGGTTGCTTTTAGACAAT
CTGTTGGATCTTGCCCATGCGCCTTTCACCCATACATCTACGTTTGCTAGAGGATGGAGT
GTCCCAAGCTTTGTAAATTTTTTGACTCCGGCATCTGGTCTGCAAGGATATTGGGATCCT
TATCCAATAGATATGGAATTTCGCCCACCTTGTATGGTTCTATCAACCATTGGAATCTCA
AAGCCAGGTAAATTGGAGGGGCAGAGCACCAAAGAGTGCTCTACACACCTTCACCAACTT
CATGTATGTTTACCTGCATCTCGACAGAAGACAAGGTTGCTATATAGGATGTCACTGGAT
TTTGCTCCCATATTAAAACACATGCCTTTTATGCAATATGTGTGGAGGCATTTTGCTGAA
CAGGTTTTAAATGAAGACCTACGGCTTGTGATTGGTCAACAAGACCGGATGCTCAAGGGT
GCTAACATTTGGAACCTGCCTGTATCATACGATAAGCTAGGAGTGAGGTATAGAATATGG
AGAGATGCTGTAGAGAGTGGAGTAAAGCAATTGCCATTCAGCAAATGA