Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400045297
CDS Infomation

pacid=37452096 polypeptide=PGSC0003DMP400030691 locus=PGSC0003DMG400017568 ID=PGSC0003DMT400045297.v4.03 annot-version=v4.03
Sequence

ATGGATGCAGAGGCGATTGTGAAGGAACTGAGAGGGACGTATGGAACTGGGAAGACGAAG
AGTTATGAGTGGAGAGTGTCGCAGTTGAAAGCTCTGTTTAAAATCGCTGAGAATCATGAG
AAGGAGATTACCGATGCTCTTTATTCTGACCTCTCTAAGCCTGAACTCGAAGCCTTTATT
CATGAGATTTCTATGATGAAAACAGCGTGTAAGCTTGCATTGAAGGAACTAAAACGGTGG
ATGAAGCCGGAAAAAGTCAAAACTTCATTAACCTCGTTTCCGTCATCAGCTGAAATAGTT
CCAGAACCCCTCGGTGTTGTATTGGTCATATCAGCATGGAACTATCCGTTCTTGTTGTCC
CTTGATCCAGTGATAGGAGCTATTGCTGCTGGTAATGCTGTAGTTCTGAAACCATCGGAA
ATAGCCCCAGCTACATCTTCAGTGCTTGCAAAGCTTTTAGGGCAGTATATGGATGTGTCT
GCTATTAGAGTTGTAGAAGGTGCAGTACCCGAGACAACTGCATTACTAGAGCAAAAATGG
GACAAAATATTTTATACAGGAAATGGAAAAGTTGGACGGATTGTGTTGGCTGCTGCTGCA
AAGCACTTGACACCTGTGGTTTTGGAGCTAGGTGGTAAATCTCCAGTTGTTGTGGATTCA
AACATCGATTACAAGATTGCAGTAAGGCGTATTATTGCTGGCAAGTGGGGCTGCAACAAT
GGACAAGCGTGCATCTCTCCTGATTATATAATTACTACCAAAGAAAATGTGCCAAAATTG
CTAGATGCTATGAAACAGGAATTGGAGAAATTCTATGGAAAGGATCCGCTAAAATCAGGA
GATCTATCTCGCATTGTGAATGCTAACCACTTTCAACGACTATCAAAGTTATTGGATGAT
AAGAAGGTTGTCGATAAGGTAGTCCATGGAGGTCAGAGAGATGAAGATAATTTAAAGATC
TCTCCTACAATTCTTCTGGATGTCCCAGAAGATTCTTTAATCATGAAGGAGGAAATATTT
GGTCCTCTACTTCCTATTATCACGGTCAATAAAGTGGAGGACTCTATACAATTCATTAAT
GCCAGAGAAAAGCCACTTGCAGCATATCTGTTCACAAGCAACAAGAAACTGGAGGAGGAG
TTCGTCATGAATATATCAGCAGGGGGTCTGCTTATCAATGACACCACTTTACAAGTTGCG
CTTTCCACTCTTCCATTTGGAGGAGTCGGGGAAAGTGGAATGGGTTCATGTCATGGCAAA
TTCTCGTTTGATTCTTTCAGCCACAAGAAGGCAGTTCTGCGTCGCAGTTTTGCTGGGGAT
GTACCTGCAAGATATCCACCTTATACAACTGGCAAGGCGCGATTTCTCAAAGCCCTGTTA
AATGGTGATATACTCGGTCTCATTCGTGCATTGATTGGGTGGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400030691
PEP Infomation

pacid=37452096 transcript=PGSC0003DMT400045297 locus=PGSC0003DMG400017568 ID=PGSC0003DMT400045297.v4.03 annot-version=v4.03
Sequence

MDAEAIVKELRGTYGTGKTKSYEWRVSQLKALFKIAENHEKEITDALYSDLSKPELEAFI
HEISMMKTACKLALKELKRWMKPEKVKTSLTSFPSSAEIVPEPLGVVLVISAWNYPFLLS
LDPVIGAIAAGNAVVLKPSEIAPATSSVLAKLLGQYMDVSAIRVVEGAVPETTALLEQKW
DKIFYTGNGKVGRIVLAAAAKHLTPVVLELGGKSPVVVDSNIDYKIAVRRIIAGKWGCNN
GQACISPDYIITTKENVPKLLDAMKQELEKFYGKDPLKSGDLSRIVNANHFQRLSKLLDD
KKVVDKVVHGGQRDEDNLKISPTILLDVPEDSLIMKEEIFGPLLPIITVNKVEDSIQFIN
AREKPLAAYLFTSNKKLEEEFVMNISAGGLLINDTTLQVALSTLPFGGVGESGMGSCHGK
FSFDSFSHKKAVLRRSFAGDVPARYPPYTTGKARFLKALLNGDILGLIRALIGW*

Transcript Sequence

Transcript ID

PGSC0003DMT400045297
Transcript Infomation

pacid=37452096 locus=PGSC0003DMG400017568 ID=PGSC0003DMT400045297.v4.03 annot-version=v4.03
Sequence

ATGGATGCAGAGGCGATTGTGAAGGAACTGAGAGGGACGTATGGAACTGGGAAGACGAAG
AGTTATGAGTGGAGAGTGTCGCAGTTGAAAGCTCTGTTTAAAATCGCTGAGAATCATGAG
AAGGAGATTACCGATGCTCTTTATTCTGACCTCTCTAAGCCTGAACTCGAAGCCTTTATT
CATGAGATTTCTATGATGAAAACAGCGTGTAAGCTTGCATTGAAGGAACTAAAACGGTGG
ATGAAGCCGGAAAAAGTCAAAACTTCATTAACCTCGTTTCCGTCATCAGCTGAAATAGTT
CCAGAACCCCTCGGTGTTGTATTGGTCATATCAGCATGGAACTATCCGTTCTTGTTGTCC
CTTGATCCAGTGATAGGAGCTATTGCTGCTGGTAATGCTGTAGTTCTGAAACCATCGGAA
ATAGCCCCAGCTACATCTTCAGTGCTTGCAAAGCTTTTAGGGCAGTATATGGATGTGTCT
GCTATTAGAGTTGTAGAAGGTGCAGTACCCGAGACAACTGCATTACTAGAGCAAAAATGG
GACAAAATATTTTATACAGGAAATGGAAAAGTTGGACGGATTGTGTTGGCTGCTGCTGCA
AAGCACTTGACACCTGTGGTTTTGGAGCTAGGTGGTAAATCTCCAGTTGTTGTGGATTCA
AACATCGATTACAAGATTGCAGTAAGGCGTATTATTGCTGGCAAGTGGGGCTGCAACAAT
GGACAAGCGTGCATCTCTCCTGATTATATAATTACTACCAAAGAAAATGTGCCAAAATTG
CTAGATGCTATGAAACAGGAATTGGAGAAATTCTATGGAAAGGATCCGCTAAAATCAGGA
GATCTATCTCGCATTGTGAATGCTAACCACTTTCAACGACTATCAAAGTTATTGGATGAT
AAGAAGGTTGTCGATAAGGTAGTCCATGGAGGTCAGAGAGATGAAGATAATTTAAAGATC
TCTCCTACAATTCTTCTGGATGTCCCAGAAGATTCTTTAATCATGAAGGAGGAAATATTT
GGTCCTCTACTTCCTATTATCACGGTCAATAAAGTGGAGGACTCTATACAATTCATTAAT
GCCAGAGAAAAGCCACTTGCAGCATATCTGTTCACAAGCAACAAGAAACTGGAGGAGGAG
TTCGTCATGAATATATCAGCAGGGGGTCTGCTTATCAATGACACCACTTTACAAGTTGCG
CTTTCCACTCTTCCATTTGGAGGAGTCGGGGAAAGTGGAATGGGTTCATGTCATGGCAAA
TTCTCGTTTGATTCTTTCAGCCACAAGAAGGCAGTTCTGCGTCGCAGTTTTGCTGGGGAT
GTACCTGCAAGATATCCACCTTATACAACTGGCAAGGCGCGATTTCTCAAAGCCCTGTTA
AATGGTGATATACTCGGTCTCATTCGTGCATTGATTGGGTGGTAA