Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400045294
CDS Infomation

pacid=37451636 polypeptide=PGSC0003DMP400030689 locus=PGSC0003DMG400017567 ID=PGSC0003DMT400045294.v4.03 annot-version=v4.03
Sequence

ATGACAGCAGCTGAATTGCAGTTACCTCCAGGATTCAGATTTCATCCAACTGATGAAGAA
CTTGTGACGCATTATTTATGCCGAAAATGCACTTCCCAGCCAATTACTGTACCAATTGTA
GCTGAAATTGATCTCTACAAGTTTGATCCATGGGATCTTCCTGATTTGGCATTGTATGGA
GAGAAAGAGTGGTACTTCTTTTCACCTCGAGATCGGAAGTATCCGAACGGTTCACGACCG
AATCGAGCTGCTGGAAGTGGATATTGGAAGGCTACTGGTGCGGATAAGCCGATTGGAATT
CCGAAAGCGGTGGGAATTAAGAAAGCATTGGTGTTTTATTCTGGTAAGGCACCTAAAGGA
GAGAAGACTAATTGGATCATGCATGAATATCGTCTTGCTGATGTTGATCGATCTGCTCGT
AAGAACAACAATAGCTTAAGGCTAGATGATTGGGTTCTATGCAGAATTTACAACAAAAAG
GGATCGATTGAGAAGAATCGGAAAATGAACACTACCTGCTATATGGATACAGTTGGATCT
CCAGAAGATAGGAAGCCGGAGATTCTACCACCGCTACCTCCACCGCCTCAGCCGCAGCAA
TTGCACAACGATTTCTTCTACCTGCCGTCCGATTCAGTTCCGAAGATCCACTCCGATTCA
AGCTGCTCAGAGCACGTACTCTCACCGGAATTCACATGCGAGAGAGAAGTGCAGAGCGAG
CCGAAACTGACTGATTGGGAGAAAGCTACCCTCGATCTTCCGTTTAATTACATGGATGCC
ACTACCGGCGCGACAACGGTGGATAATAGCTTGTTAGGTTCTCAGTTTCAAAGCTGTTAT
CAGATGTCGCCGCTGCAGGATATGTTCATGCACCTGCACAGACCTTTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400030689
PEP Infomation

pacid=37451636 transcript=PGSC0003DMT400045294 locus=PGSC0003DMG400017567 ID=PGSC0003DMT400045294.v4.03 annot-version=v4.03
Sequence

MTAAELQLPPGFRFHPTDEELVTHYLCRKCTSQPITVPIVAEIDLYKFDPWDLPDLALYG
EKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGIPKAVGIKKALVFYSGKAPKG
EKTNWIMHEYRLADVDRSARKNNNSLRLDDWVLCRIYNKKGSIEKNRKMNTTCYMDTVGS
PEDRKPEILPPLPPPPQPQQLHNDFFYLPSDSVPKIHSDSSCSEHVLSPEFTCEREVQSE
PKLTDWEKATLDLPFNYMDATTGATTVDNSLLGSQFQSCYQMSPLQDMFMHLHRPF*

Transcript Sequence

Transcript ID

PGSC0003DMT400045294
Transcript Infomation

pacid=37451636 locus=PGSC0003DMG400017567 ID=PGSC0003DMT400045294.v4.03 annot-version=v4.03
Sequence

ATGACAGCAGCTGAATTGCAGTTACCTCCAGGATTCAGATTTCATCCAACTGATGAAGAA
CTTGTGACGCATTATTTATGCCGAAAATGCACTTCCCAGCCAATTACTGTACCAATTGTA
GCTGAAATTGATCTCTACAAGTTTGATCCATGGGATCTTCCTGATTTGGCATTGTATGGA
GAGAAAGAGTGGTACTTCTTTTCACCTCGAGATCGGAAGTATCCGAACGGTTCACGACCG
AATCGAGCTGCTGGAAGTGGATATTGGAAGGCTACTGGTGCGGATAAGCCGATTGGAATT
CCGAAAGCGGTGGGAATTAAGAAAGCATTGGTGTTTTATTCTGGTAAGGCACCTAAAGGA
GAGAAGACTAATTGGATCATGCATGAATATCGTCTTGCTGATGTTGATCGATCTGCTCGT
AAGAACAACAATAGCTTAAGGCTAGATGATTGGGTTCTATGCAGAATTTACAACAAAAAG
GGATCGATTGAGAAGAATCGGAAAATGAACACTACCTGCTATATGGATACAGTTGGATCT
CCAGAAGATAGGAAGCCGGAGATTCTACCACCGCTACCTCCACCGCCTCAGCCGCAGCAA
TTGCACAACGATTTCTTCTACCTGCCGTCCGATTCAGTTCCGAAGATCCACTCCGATTCA
AGCTGCTCAGAGCACGTACTCTCACCGGAATTCACATGCGAGAGAGAAGTGCAGAGCGAG
CCGAAACTGACTGATTGGGAGAAAGCTACCCTCGATCTTCCGTTTAATTACATGGATGCC
ACTACCGGCGCGACAACGGTGGATAATAGCTTGTTAGGTTCTCAGTTTCAAAGCTGTTAT
CAGATGTCGCCGCTGCAGGATATGTTCATGCACCTGCACAGACCTTTTTGA