Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400045261
CDS Infomation

pacid=37453830 polypeptide=PGSC0003DMP400030673 locus=PGSC0003DMG400017559 ID=PGSC0003DMT400045261.v4.03 annot-version=v4.03
Sequence

ATGGAGGAATTAGAAGAAGCGTTGAGTGATAAAGGGCTCACCGTCTCTTCTGTGCCGGAA
AAGGGTCGCTGCCTTTTCACCACTCGGGATTTCTTTCCAGGGGAAGTGATTATATCAGAA
GATCCATATGTTTCAGTTCCCAATAAATCAGCTAAATGTGAATGGTGTTTCACTTCAAAT
AACCTTAAGAGATGTTCTGCATGCCAAGTAGTTTGCTACTGTGGCAACACATGCCAGAAG
TTGGATTGGAAGTTGCATAGGGTTGAATGCCAGGCCTTGTCAAAGGTTGACAAGGAGAGG
GTAAAATCAATTACGCCAAGTATAAGATTGATGGTTAAGCTTTATCTGCGGAGGAAACTA
CAAGATGAGAAGGTTATTCCAATTACAGTCATGGACAATTACAATCTGGTGGAATCCTTG
GTTTCTCATATGACTGATATTGATGAGAAACAACTAGTTTTGTATGCTCAGATGGCAAAC
CTTGTCAGTCTGATTCTTCAATGGCCCGAGATCAATGTAAAGGAGATTGCAGAAAACTTT
TCTAAGTTTTCATGTAATGCACATACAATTTGTGATGCTGAACTGAAACCCCTGGGGACA
GGCCTTTATCCGGTGGTTTCTATAATCAACCATAGTTGTTTGCCGAATTCGGTTCTAATA
TTTGAGGGAAGAATGGCTGTTGTCCGAGCGGTGCAGCATATACCCAAAGGTACTGAGGTA
TCAATAAGTTATATAGAAATGGCTGGAACCACTGCAACTCGTCAAAAGGCTCTTAAAGAA
CAGTACCTTTTCTCCTGCACTTGCATTCGCTGCATCAAGTTGGGCCAAAATGATGATATC
CAAGAAAGTGCAGTTCTGGAGGGTTATAAATGCAAGGACAAGAAATGCAGTGGTTTCCTG
CTTCGTGACTCTGGTAATAAAGGATTCACATGCCAATTATGTGGACTCGTTAGGGACAAG
GAAGAAATAAAGAATACTGTTCATGAAATCCAATCACTGTCAGAAAAGGCTTCGTTTTCA
CTTTCATGTGGACATAACAAAGATGTTAGTGTAATGTATAAGATGATTGAGACACTTCAA
TTGAAGCTGTACCATCCATTGTCGATCAATCTGATGCGCACGCGGGAGAATCTCTTAAAG
ATATTGATGGAGCTGCAAGATTGGAAGGAGGCACTGAAGTATTGCAGATTAACTATTCCA
GTTTATCAAAGAGTTTATCCAGAATGTCATCCTTTACTCGGACTGCAATATTACACTTGT
GGAAAACTTGAATGGTGGCTTGGTGAGACTGAGGAAGCGTACAGATCACTAGCCAAGGCA
GCAGAGGTACTGCGAATTACTCATGGAACAAACACCACTTTCATGGAGGAACTTTTTGTG
AAGTTAGAAGAAGCTCGTGCGGAGCTCTCTTACAAGAGTTCATCCAAGGAAGAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400030673
PEP Infomation

pacid=37453830 transcript=PGSC0003DMT400045261 locus=PGSC0003DMG400017559 ID=PGSC0003DMT400045261.v4.03 annot-version=v4.03
Sequence

MEELEEALSDKGLTVSSVPEKGRCLFTTRDFFPGEVIISEDPYVSVPNKSAKCEWCFTSN
NLKRCSACQVVCYCGNTCQKLDWKLHRVECQALSKVDKERVKSITPSIRLMVKLYLRRKL
QDEKVIPITVMDNYNLVESLVSHMTDIDEKQLVLYAQMANLVSLILQWPEINVKEIAENF
SKFSCNAHTICDAELKPLGTGLYPVVSIINHSCLPNSVLIFEGRMAVVRAVQHIPKGTEV
SISYIEMAGTTATRQKALKEQYLFSCTCIRCIKLGQNDDIQESAVLEGYKCKDKKCSGFL
LRDSGNKGFTCQLCGLVRDKEEIKNTVHEIQSLSEKASFSLSCGHNKDVSVMYKMIETLQ
LKLYHPLSINLMRTRENLLKILMELQDWKEALKYCRLTIPVYQRVYPECHPLLGLQYYTC
GKLEWWLGETEEAYRSLAKAAEVLRITHGTNTTFMEELFVKLEEARAELSYKSSSKEE*

Transcript Sequence

Transcript ID

PGSC0003DMT400045261
Transcript Infomation

pacid=37453830 locus=PGSC0003DMG400017559 ID=PGSC0003DMT400045261.v4.03 annot-version=v4.03
Sequence

ATGGAGGAATTAGAAGAAGCGTTGAGTGATAAAGGGCTCACCGTCTCTTCTGTGCCGGAA
AAGGGTCGCTGCCTTTTCACCACTCGGGATTTCTTTCCAGGGGAAGTGATTATATCAGAA
GATCCATATGTTTCAGTTCCCAATAAATCAGCTAAATGTGAATGGTGTTTCACTTCAAAT
AACCTTAAGAGATGTTCTGCATGCCAAGTAGTTTGCTACTGTGGCAACACATGCCAGAAG
TTGGATTGGAAGTTGCATAGGGTTGAATGCCAGGCCTTGTCAAAGGTTGACAAGGAGAGG
GTAAAATCAATTACGCCAAGTATAAGATTGATGGTTAAGCTTTATCTGCGGAGGAAACTA
CAAGATGAGAAGGTTATTCCAATTACAGTCATGGACAATTACAATCTGGTGGAATCCTTG
GTTTCTCATATGACTGATATTGATGAGAAACAACTAGTTTTGTATGCTCAGATGGCAAAC
CTTGTCAGTCTGATTCTTCAATGGCCCGAGATCAATGTAAAGGAGATTGCAGAAAACTTT
TCTAAGTTTTCATGTAATGCACATACAATTTGTGATGCTGAACTGAAACCCCTGGGGACA
GGCCTTTATCCGGTGGTTTCTATAATCAACCATAGTTGTTTGCCGAATTCGGTTCTAATA
TTTGAGGGAAGAATGGCTGTTGTCCGAGCGGTGCAGCATATACCCAAAGGTACTGAGGTA
TCAATAAGTTATATAGAAATGGCTGGAACCACTGCAACTCGTCAAAAGGCTCTTAAAGAA
CAGTACCTTTTCTCCTGCACTTGCATTCGCTGCATCAAGTTGGGCCAAAATGATGATATC
CAAGAAAGTGCAGTTCTGGAGGGTTATAAATGCAAGGACAAGAAATGCAGTGGTTTCCTG
CTTCGTGACTCTGGTAATAAAGGATTCACATGCCAATTATGTGGACTCGTTAGGGACAAG
GAAGAAATAAAGAATACTGTTCATGAAATCCAATCACTGTCAGAAAAGGCTTCGTTTTCA
CTTTCATGTGGACATAACAAAGATGTTAGTGTAATGTATAAGATGATTGAGACACTTCAA
TTGAAGCTGTACCATCCATTGTCGATCAATCTGATGCGCACGCGGGAGAATCTCTTAAAG
ATATTGATGGAGCTGCAAGATTGGAAGGAGGCACTGAAGTATTGCAGATTAACTATTCCA
GTTTATCAAAGAGTTTATCCAGAATGTCATCCTTTACTCGGACTGCAATATTACACTTGT
GGAAAACTTGAATGGTGGCTTGGTGAGACTGAGGAAGCGTACAGATCACTAGCCAAGGCA
GCAGAGGTACTGCGAATTACTCATGGAACAAACACCACTTTCATGGAGGAACTTTTTGTG
AAGTTAGAAGAAGCTCGTGCGGAGCTCTCTTACAAGAGTTCATCCAAGGAAGAATGA