Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400045176
CDS Infomation

pacid=37468219 polypeptide=PGSC0003DMP400030606 locus=PGSC0003DMG400017524 ID=PGSC0003DMT400045176.v4.03 annot-version=v4.03
Sequence

ATGAGCCAACAAGAAAGTCATGCATTATCTGTTGACAGTAGCAACATTTCAAAAATGAAG
CAGAAAAATAATAATAATGGAGAAGAAGAAAGGAAAAAGATTCATCAGAAAGTTTCATTG
TTGAAACTTTTCTCTTTTGCTGATTCCTATGATTATTTGTTGATGATTTTGGGATCTATT
GGTGCTTGTTTACATGGTGCTTCTGTACCTGTTTTCTTCATTTTCTTTGGCAAAATGATT
AATATTGCTGGCCTTGCTTACCTTTTTCCTGCTCAAACTTCTCACAAAGTTGCCAAGTAT
TCATTGGATTTTGTGTACCTAAGCGTGGTGATATTATTTTCATCATGGATAGAGGTGGCA
TGTTGGATGCACAGTGGAGAAAGACAAGCAGCAAAGATAAGAATGGCATACTTAAAGTCT
ATGTTGAATCAAGATATAAGTCTCTTTGACACTGAGGCTTCTACTGGAGAAGTCATTTCT
GCAATTACCAGTGATATTATTATTGTTCAGGATGCTATTTCTGAAAAGGCAGGGAATTTC
TTGCATTATATCAGCCGTTTCTTAGCTGGTTTTACAATTGGGTTCATAAGAGTATGGCAG
ATCAGTTTGGTGACGCTTTCAATTGTGCCTTTGATCGCTCTTGCTGGTGGTATTTATGCC
TATGTTACCATTGGTCTCATTGCTCGAGTCCGCAAATCCTATATTAAAGCTGGAGAGATT
GCTGAAGAGGTTGTAGCTAATATTAGAACAGTGCAAGCATTTACTGGAGAAGAGAAGGCG
GTAAAATCGTATAAAGGTGCCTTGTTGAACACTTATAAGTATGGGAGAAAAGCTGGATTG
GCCAAGGGCTTGGGTTTGGGCACCTTGCATTGTGTCCTTTTCCTTTCTTGGTCATTGCTT
GTGTGGTTTACTAGCATTGTTGTGCACAAGAACATTGCAAATGGAGGAGATTCTTTCACC
ACCATGCTCAATGTTGTCATTGCTGGCCTGTCACTGGGGCAGGCAGCACCAGATATTACA
GCATTCCTCAGGGCTAAGTCAGCTGCCTATCCTATTTTTGAGATGATTGAACGAGATACT
ATCAGTAAAACCAGCTCCAAGAGTGGTCAGAAGCTGAGCAAAGTAGATGGACACATACAA
TTTAAGGATGTATGTTTTAGCTATCCATCTCGTCCCGATGTGGTGATCTTTGACAAGCTC
TCTCTTGATATTCCATCAGGGAAGATTGTAGCTCTTGTGGGAGGAAGTGGATCAGGGAAA
AGTACAGTTATATCTTTGATTGAACGCTTCTATGAACCGCTCTCGGGACAGATATTATTG
GATGGATGTGATATTAGGCACCTGGACTTGAACTGGCTGAGGCAGCAAATAGGGCTAGTA
AATCAAGAACCCGCTCTTTTTGCTACAACCATTAGAGAGAACATTCTCTATGGAAAAAGT
GATGCTAGCCTAGAAGATATTGCACGTGCGGCCAAACTTTCCGAGGCAATGACTTTCATC
AACAACCTCCCCGATCGGTTTGAAACTCAGGTTGGTGAAAGAGGGGTTCAGTTATCTGGG
GGGCAGAAGCAAAGAATTGCAATTTCTCGTGCTATAGTGAAGAATCCATCAATTCTTCTA
TTAGATGAAGCTACAAGTGCACTTGATGCTGAGTCAGAAAAAAGTGTACAAGATGCTCTT
GATCGTGTGATGGTGGGAAGAACAACTGTAATTGTTGCTCATCGCCTTTCTACCATTAGG
AATGCTGATATCATAGCGGTTGTAAACAATGGCAAGATAGTAGAAACTGGAAGTCACGAG
GAGCTTATTTCAAAACCAAATAGTGCCTATGCATCACTTGTTCAACTTCAACATGCAGCT
TCTTCACATCTCCATCCTTCTCAAGAGCCAACCATGGGACGACCTCATAGCATAAGGTAT
TCCCATGAATTATCCCGAACGACAACTCGAAGCCGTGGAGCTAGCTTTCGTTCTGAAAAA
TCTGTTAGCGGTATTGGTGCTGGTGGTGTAGAGGATGTTAAGTCACAAAATATTTCCGCA
GGGAGATTGTATTCTATGATTAGTCCTGAATGGCATTATGGAGTTATTGGAACTGTCTGT
GCATTTATTGCTGGAGCTCAGATGCCTCTCTTTGCCTTAGGGGTGTCACAGGCCCTTGTG
TCTTACTACATGGATTGGGATACAACACGCCACGAAGTGAAGAAGATTTGTTTCCTGTTT
TGTGTTGGTGCAGTATTAACCGTCGTCGTTCATGCCATTGCACATACTTGCTTTGGAATC
ATAGGAGAGCGGCTTACTCTTCGCATGAGAGAAAGGATGTTCTCTGCTATGCTAAGAAAT
GAGATAGGATGGTTTGATGAGATGAACAACTCAAGTTCTACACTTGCATCACGATTGGAA
AGTGATGCTACTCTATTGCGAACTGTAGTGGTTGATCGCTCTACTATTCTCCTACAGAAT
GTGGGTTTGGTGGCCACTTCCTTCATCATTGCATTCATCTTGAATTGGAGGCTCACCCTT
GTTGTCATAGCTATGTACCCACTTATCGTTAGTGGTCACATCAGCGAGAAACTCTTTATG
TCAGGCTTTGGTGGTGACTTGAGCAAAGCCTATCTTAGAGCAAACATGTTTGCTGGTGAG
GCTGTAAGTAACATCAGAACTGTTGCAGCATTCTGTGCTGAGGAGAAGGTAACTGATCTC
TATGCTCGTGAACTTGTTGAACCTGCAAAGCGTTCATTTAGCAGGGGACAGACTGCCGGG
ATCCTTTATGGAGTCTCTCAGTTTTTCATCTTCTCCTCTTATGCCCTTGCCTTATGGTAT
GGTTCTGTTTTGATGGGGAAGGAGCTAACCAGCTTCAAAGCTGTTATGAAATCGTTTATG
GTTTTGATTGTAACTGCTTTGGCTATGGGAGAGACTCTTGCTATGGCACCAGACCTTATA
AAAGGAAACCAGATGGTAGCATCAGTATTTGAAGTGCTTGATCGGAAGACAGAAATTGCA
ACCGACAGTGGGGAGGAGGTAACTGCGGTTGAGGGAACAATTGAGTTTAAGGATGTTGAG
TTCTGCTATCCTGCAAGACCCGATGTTCACATTTTCAGAGATTTCAATATGAGAGTGCAT
GCGGGAAAGAGTATGGCGATAGTAGGGCAGAGTGGTTCTGGTAAAAGCTCAGTATTGGCT
CTCATCTTACGGTTCTATGATCCAATATCTGGGAAAGTGATCATTGATGGCAAGGACATC
AGGAAACTAAAGCTCAATTCTCTAAGAAAGCACATTGGCCTGGTCCAACAAGAACCAGCA
CTCTTTGCCACAACAATCTATGAAAACATCCTTTATGGAAAAGAGGGAGCATCTGAAGCA
GAAGTGATTCAAGCAGCTAAGCTTGCTAATGCACATAGTTTCATTAGTGCTCTTCCTGAT
GGCTACTCGACCCAAGTTGGGGAACGAGGAGTTCAATTGTCCGGTGGACAGAAGCAAAGG
GTAGCCATTGCCCGAGCTGTTCTCAAGAACCCTGAAATCTTGCTATTAGATGAAGCTACA
AGTGCTCTGGACGTGGAATCTGAGCGTATAGTTCAACAGGCGTTGGACAGGTTGATGCGA
AACAGGACTACTGTCATCGTGGCACATCGACTATCCACCATAAAAGATGCAGATCAGATA
TCTGTTTTACAAGATGGGAAAATCGTCGATCAAGGGACTCACTCTGCATTGATAGAGAAC
AGAGATGGAGCATACTATAAGCTAATTAACTTACAGCAACAGCAGCAACAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400030606
PEP Infomation

pacid=37468219 transcript=PGSC0003DMT400045176 locus=PGSC0003DMG400017524 ID=PGSC0003DMT400045176.v4.03 annot-version=v4.03
Sequence

MSQQESHALSVDSSNISKMKQKNNNNGEEERKKIHQKVSLLKLFSFADSYDYLLMILGSI
GACLHGASVPVFFIFFGKMINIAGLAYLFPAQTSHKVAKYSLDFVYLSVVILFSSWIEVA
CWMHSGERQAAKIRMAYLKSMLNQDISLFDTEASTGEVISAITSDIIIVQDAISEKAGNF
LHYISRFLAGFTIGFIRVWQISLVTLSIVPLIALAGGIYAYVTIGLIARVRKSYIKAGEI
AEEVVANIRTVQAFTGEEKAVKSYKGALLNTYKYGRKAGLAKGLGLGTLHCVLFLSWSLL
VWFTSIVVHKNIANGGDSFTTMLNVVIAGLSLGQAAPDITAFLRAKSAAYPIFEMIERDT
ISKTSSKSGQKLSKVDGHIQFKDVCFSYPSRPDVVIFDKLSLDIPSGKIVALVGGSGSGK
STVISLIERFYEPLSGQILLDGCDIRHLDLNWLRQQIGLVNQEPALFATTIRENILYGKS
DASLEDIARAAKLSEAMTFINNLPDRFETQVGERGVQLSGGQKQRIAISRAIVKNPSILL
LDEATSALDAESEKSVQDALDRVMVGRTTVIVAHRLSTIRNADIIAVVNNGKIVETGSHE
ELISKPNSAYASLVQLQHAASSHLHPSQEPTMGRPHSIRYSHELSRTTTRSRGASFRSEK
SVSGIGAGGVEDVKSQNISAGRLYSMISPEWHYGVIGTVCAFIAGAQMPLFALGVSQALV
SYYMDWDTTRHEVKKICFLFCVGAVLTVVVHAIAHTCFGIIGERLTLRMRERMFSAMLRN
EIGWFDEMNNSSSTLASRLESDATLLRTVVVDRSTILLQNVGLVATSFIIAFILNWRLTL
VVIAMYPLIVSGHISEKLFMSGFGGDLSKAYLRANMFAGEAVSNIRTVAAFCAEEKVTDL
YARELVEPAKRSFSRGQTAGILYGVSQFFIFSSYALALWYGSVLMGKELTSFKAVMKSFM
VLIVTALAMGETLAMAPDLIKGNQMVASVFEVLDRKTEIATDSGEEVTAVEGTIEFKDVE
FCYPARPDVHIFRDFNMRVHAGKSMAIVGQSGSGKSSVLALILRFYDPISGKVIIDGKDI
RKLKLNSLRKHIGLVQQEPALFATTIYENILYGKEGASEAEVIQAAKLANAHSFISALPD
GYSTQVGERGVQLSGGQKQRVAIARAVLKNPEILLLDEATSALDVESERIVQQALDRLMR
NRTTVIVAHRLSTIKDADQISVLQDGKIVDQGTHSALIENRDGAYYKLINLQQQQQQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400045176
Transcript Infomation

pacid=37468219 locus=PGSC0003DMG400017524 ID=PGSC0003DMT400045176.v4.03 annot-version=v4.03
Sequence

ATGAGCCAACAAGAAAGTCATGCATTATCTGTTGACAGTAGCAACATTTCAAAAATGAAG
CAGAAAAATAATAATAATGGAGAAGAAGAAAGGAAAAAGATTCATCAGAAAGTTTCATTG
TTGAAACTTTTCTCTTTTGCTGATTCCTATGATTATTTGTTGATGATTTTGGGATCTATT
GGTGCTTGTTTACATGGTGCTTCTGTACCTGTTTTCTTCATTTTCTTTGGCAAAATGATT
AATATTGCTGGCCTTGCTTACCTTTTTCCTGCTCAAACTTCTCACAAAGTTGCCAAGTAT
TCATTGGATTTTGTGTACCTAAGCGTGGTGATATTATTTTCATCATGGATAGAGGTGGCA
TGTTGGATGCACAGTGGAGAAAGACAAGCAGCAAAGATAAGAATGGCATACTTAAAGTCT
ATGTTGAATCAAGATATAAGTCTCTTTGACACTGAGGCTTCTACTGGAGAAGTCATTTCT
GCAATTACCAGTGATATTATTATTGTTCAGGATGCTATTTCTGAAAAGGCAGGGAATTTC
TTGCATTATATCAGCCGTTTCTTAGCTGGTTTTACAATTGGGTTCATAAGAGTATGGCAG
ATCAGTTTGGTGACGCTTTCAATTGTGCCTTTGATCGCTCTTGCTGGTGGTATTTATGCC
TATGTTACCATTGGTCTCATTGCTCGAGTCCGCAAATCCTATATTAAAGCTGGAGAGATT
GCTGAAGAGGTTGTAGCTAATATTAGAACAGTGCAAGCATTTACTGGAGAAGAGAAGGCG
GTAAAATCGTATAAAGGTGCCTTGTTGAACACTTATAAGTATGGGAGAAAAGCTGGATTG
GCCAAGGGCTTGGGTTTGGGCACCTTGCATTGTGTCCTTTTCCTTTCTTGGTCATTGCTT
GTGTGGTTTACTAGCATTGTTGTGCACAAGAACATTGCAAATGGAGGAGATTCTTTCACC
ACCATGCTCAATGTTGTCATTGCTGGCCTGTCACTGGGGCAGGCAGCACCAGATATTACA
GCATTCCTCAGGGCTAAGTCAGCTGCCTATCCTATTTTTGAGATGATTGAACGAGATACT
ATCAGTAAAACCAGCTCCAAGAGTGGTCAGAAGCTGAGCAAAGTAGATGGACACATACAA
TTTAAGGATGTATGTTTTAGCTATCCATCTCGTCCCGATGTGGTGATCTTTGACAAGCTC
TCTCTTGATATTCCATCAGGGAAGATTGTAGCTCTTGTGGGAGGAAGTGGATCAGGGAAA
AGTACAGTTATATCTTTGATTGAACGCTTCTATGAACCGCTCTCGGGACAGATATTATTG
GATGGATGTGATATTAGGCACCTGGACTTGAACTGGCTGAGGCAGCAAATAGGGCTAGTA
AATCAAGAACCCGCTCTTTTTGCTACAACCATTAGAGAGAACATTCTCTATGGAAAAAGT
GATGCTAGCCTAGAAGATATTGCACGTGCGGCCAAACTTTCCGAGGCAATGACTTTCATC
AACAACCTCCCCGATCGGTTTGAAACTCAGGTTGGTGAAAGAGGGGTTCAGTTATCTGGG
GGGCAGAAGCAAAGAATTGCAATTTCTCGTGCTATAGTGAAGAATCCATCAATTCTTCTA
TTAGATGAAGCTACAAGTGCACTTGATGCTGAGTCAGAAAAAAGTGTACAAGATGCTCTT
GATCGTGTGATGGTGGGAAGAACAACTGTAATTGTTGCTCATCGCCTTTCTACCATTAGG
AATGCTGATATCATAGCGGTTGTAAACAATGGCAAGATAGTAGAAACTGGAAGTCACGAG
GAGCTTATTTCAAAACCAAATAGTGCCTATGCATCACTTGTTCAACTTCAACATGCAGCT
TCTTCACATCTCCATCCTTCTCAAGAGCCAACCATGGGACGACCTCATAGCATAAGGTAT
TCCCATGAATTATCCCGAACGACAACTCGAAGCCGTGGAGCTAGCTTTCGTTCTGAAAAA
TCTGTTAGCGGTATTGGTGCTGGTGGTGTAGAGGATGTTAAGTCACAAAATATTTCCGCA
GGGAGATTGTATTCTATGATTAGTCCTGAATGGCATTATGGAGTTATTGGAACTGTCTGT
GCATTTATTGCTGGAGCTCAGATGCCTCTCTTTGCCTTAGGGGTGTCACAGGCCCTTGTG
TCTTACTACATGGATTGGGATACAACACGCCACGAAGTGAAGAAGATTTGTTTCCTGTTT
TGTGTTGGTGCAGTATTAACCGTCGTCGTTCATGCCATTGCACATACTTGCTTTGGAATC
ATAGGAGAGCGGCTTACTCTTCGCATGAGAGAAAGGATGTTCTCTGCTATGCTAAGAAAT
GAGATAGGATGGTTTGATGAGATGAACAACTCAAGTTCTACACTTGCATCACGATTGGAA
AGTGATGCTACTCTATTGCGAACTGTAGTGGTTGATCGCTCTACTATTCTCCTACAGAAT
GTGGGTTTGGTGGCCACTTCCTTCATCATTGCATTCATCTTGAATTGGAGGCTCACCCTT
GTTGTCATAGCTATGTACCCACTTATCGTTAGTGGTCACATCAGCGAGAAACTCTTTATG
TCAGGCTTTGGTGGTGACTTGAGCAAAGCCTATCTTAGAGCAAACATGTTTGCTGGTGAG
GCTGTAAGTAACATCAGAACTGTTGCAGCATTCTGTGCTGAGGAGAAGGTAACTGATCTC
TATGCTCGTGAACTTGTTGAACCTGCAAAGCGTTCATTTAGCAGGGGACAGACTGCCGGG
ATCCTTTATGGAGTCTCTCAGTTTTTCATCTTCTCCTCTTATGCCCTTGCCTTATGGTAT
GGTTCTGTTTTGATGGGGAAGGAGCTAACCAGCTTCAAAGCTGTTATGAAATCGTTTATG
GTTTTGATTGTAACTGCTTTGGCTATGGGAGAGACTCTTGCTATGGCACCAGACCTTATA
AAAGGAAACCAGATGGTAGCATCAGTATTTGAAGTGCTTGATCGGAAGACAGAAATTGCA
ACCGACAGTGGGGAGGAGGTAACTGCGGTTGAGGGAACAATTGAGTTTAAGGATGTTGAG
TTCTGCTATCCTGCAAGACCCGATGTTCACATTTTCAGAGATTTCAATATGAGAGTGCAT
GCGGGAAAGAGTATGGCGATAGTAGGGCAGAGTGGTTCTGGTAAAAGCTCAGTATTGGCT
CTCATCTTACGGTTCTATGATCCAATATCTGGGAAAGTGATCATTGATGGCAAGGACATC
AGGAAACTAAAGCTCAATTCTCTAAGAAAGCACATTGGCCTGGTCCAACAAGAACCAGCA
CTCTTTGCCACAACAATCTATGAAAACATCCTTTATGGAAAAGAGGGAGCATCTGAAGCA
GAAGTGATTCAAGCAGCTAAGCTTGCTAATGCACATAGTTTCATTAGTGCTCTTCCTGAT
GGCTACTCGACCCAAGTTGGGGAACGAGGAGTTCAATTGTCCGGTGGACAGAAGCAAAGG
GTAGCCATTGCCCGAGCTGTTCTCAAGAACCCTGAAATCTTGCTATTAGATGAAGCTACA
AGTGCTCTGGACGTGGAATCTGAGCGTATAGTTCAACAGGCGTTGGACAGGTTGATGCGA
AACAGGACTACTGTCATCGTGGCACATCGACTATCCACCATAAAAGATGCAGATCAGATA
TCTGTTTTACAAGATGGGAAAATCGTCGATCAAGGGACTCACTCTGCATTGATAGAGAAC
AGAGATGGAGCATACTATAAGCTAATTAACTTACAGCAACAGCAGCAACAGTAA