Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400045138
CDS Infomation

pacid=37470068 polypeptide=PGSC0003DMP400030574 locus=PGSC0003DMG400017508 ID=PGSC0003DMT400045138.v4.03 annot-version=v4.03
Sequence

ATGGATAACGGGAGCAAGCAACTACACGTCCTCTTCCTTCCTTACTTCGCCACTGGTCAT
ATCATTCCATTAGTTAACGCTGCCAGGCTATTCGCCTCCCGTGGCGGTGTCAAAGTTACC
ATTCTCACTACCCACCACAATGCTTCCCTCTTCCGATCTTCTATTGACAATTCCCTAATC
TCTATCGATACTCTTAAGTTCCCTTCCACTGAAGTTGGGTTGCCTGAAGGGATCGAAAAT
TTCAGCTCCGCCTCTTCAACTGAAATCGCAGGCAAAATACTTCACGGCATTTTTCTTCTG
CAGAAACCAATGGAAGATAAAATTCGTGAAATCCATCCTGATTGTATCTTCTCTGATATG
TATTTCCCATGGACTGTCGATATTGCACTGGAGCTCAAAATCCCCAGGCTATTGTTCAAC
CAATCTAGCTACATGTACAATTCCATTCTGTATAATCTTAGGCTTTACAAACCTCATGAA
AAACTCATCAATCAGATGGAATCCAAAAGTACTAATTTCTCGGTTCCGGGTTTACCTGAT
AAGATCGAGTTCAAGCTATCGCAACTTACAGACGATCTGGTAAGGCCTGCGGATGAGAGG
AATGCTTTTGATGAATTGCTCGATCGAACCAGAGAATCTGAGGATCTAAGCTACGGTATC
GTTCATGATACTTTTTACGAGCTAGAACCTGCCTACGCTGACTACTATCAAAAGATGAAG
AAAACCAAATGTTGGCAAATTGGTCCCATTTCCTATTTTTCTTCCAAATTATTCCGAAGA
AAAGAACTGATTAATTCTTCTGATGAAAGTAACTCATCTGCCGTTGTTGTAGAGTGGTTG
AATAAACACAAGCACAAATCGGTCCTCTACGTCTCTTTTGGGAGCACAGTTAGATTCCCA
GAGGAGCAACTCGCTGAAATCGCAAAAGCTCTAGAAGCTTCTACCGTCCCTTTCATTTGG
GCAGTGAACAAGGACCAATCCACGTGGTTACCGGAGAGTTTGTTCGATGAGAAAAAATGT
CTGATTATTAAAGGGTGGGCACCGCAACTAACCATCTTAGATCATTCAGCAGTCGGAGGA
TTCATGACACACTGTGGTTGGAATTCAGTGCTTGAAGCCATCATCGCTGGGGTGCCGTTG
GTGACGTGGCCAGTGTTCGCTGAACAATTCTACAATGAAAAACTAGTGGAGGTTATGGGA
CTAGGAGTGAAAGTAGGGGCAGAAGTATATAACACCGACGGAGGTGCTGAGATATCGACC
CCTGTGTTAAGGAGCGAAAAGATAAAAGAAGCAATTGAGAGGTTAATGGAAAGTCAGAAA
ATAAGAGAGAAAGCAGCGAGTATGAGTAAGATGGCTAAAAATGCAGTGGAAGAAGGTGGA
TCTTCATGGAACAATCTTACCGCACTTATAGATGATATCAAGAATTTTACTTCTTCTTCA
TTGAATGAAGATCATGGATTAACAGCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400030574
PEP Infomation

pacid=37470068 transcript=PGSC0003DMT400045138 locus=PGSC0003DMG400017508 ID=PGSC0003DMT400045138.v4.03 annot-version=v4.03
Sequence

MDNGSKQLHVLFLPYFATGHIIPLVNAARLFASRGGVKVTILTTHHNASLFRSSIDNSLI
SIDTLKFPSTEVGLPEGIENFSSASSTEIAGKILHGIFLLQKPMEDKIREIHPDCIFSDM
YFPWTVDIALELKIPRLLFNQSSYMYNSILYNLRLYKPHEKLINQMESKSTNFSVPGLPD
KIEFKLSQLTDDLVRPADERNAFDELLDRTRESEDLSYGIVHDTFYELEPAYADYYQKMK
KTKCWQIGPISYFSSKLFRRKELINSSDESNSSAVVVEWLNKHKHKSVLYVSFGSTVRFP
EEQLAEIAKALEASTVPFIWAVNKDQSTWLPESLFDEKKCLIIKGWAPQLTILDHSAVGG
FMTHCGWNSVLEAIIAGVPLVTWPVFAEQFYNEKLVEVMGLGVKVGAEVYNTDGGAEIST
PVLRSEKIKEAIERLMESQKIREKAASMSKMAKNAVEEGGSSWNNLTALIDDIKNFTSSS
LNEDHGLTA*

Transcript Sequence

Transcript ID

PGSC0003DMT400045138
Transcript Infomation

pacid=37470068 locus=PGSC0003DMG400017508 ID=PGSC0003DMT400045138.v4.03 annot-version=v4.03
Sequence

ATGGATAACGGGAGCAAGCAACTACACGTCCTCTTCCTTCCTTACTTCGCCACTGGTCAT
ATCATTCCATTAGTTAACGCTGCCAGGCTATTCGCCTCCCGTGGCGGTGTCAAAGTTACC
ATTCTCACTACCCACCACAATGCTTCCCTCTTCCGATCTTCTATTGACAATTCCCTAATC
TCTATCGATACTCTTAAGTTCCCTTCCACTGAAGTTGGGTTGCCTGAAGGGATCGAAAAT
TTCAGCTCCGCCTCTTCAACTGAAATCGCAGGCAAAATACTTCACGGCATTTTTCTTCTG
CAGAAACCAATGGAAGATAAAATTCGTGAAATCCATCCTGATTGTATCTTCTCTGATATG
TATTTCCCATGGACTGTCGATATTGCACTGGAGCTCAAAATCCCCAGGCTATTGTTCAAC
CAATCTAGCTACATGTACAATTCCATTCTGTATAATCTTAGGCTTTACAAACCTCATGAA
AAACTCATCAATCAGATGGAATCCAAAAGTACTAATTTCTCGGTTCCGGGTTTACCTGAT
AAGATCGAGTTCAAGCTATCGCAACTTACAGACGATCTGGTAAGGCCTGCGGATGAGAGG
AATGCTTTTGATGAATTGCTCGATCGAACCAGAGAATCTGAGGATCTAAGCTACGGTATC
GTTCATGATACTTTTTACGAGCTAGAACCTGCCTACGCTGACTACTATCAAAAGATGAAG
AAAACCAAATGTTGGCAAATTGGTCCCATTTCCTATTTTTCTTCCAAATTATTCCGAAGA
AAAGAACTGATTAATTCTTCTGATGAAAGTAACTCATCTGCCGTTGTTGTAGAGTGGTTG
AATAAACACAAGCACAAATCGGTCCTCTACGTCTCTTTTGGGAGCACAGTTAGATTCCCA
GAGGAGCAACTCGCTGAAATCGCAAAAGCTCTAGAAGCTTCTACCGTCCCTTTCATTTGG
GCAGTGAACAAGGACCAATCCACGTGGTTACCGGAGAGTTTGTTCGATGAGAAAAAATGT
CTGATTATTAAAGGGTGGGCACCGCAACTAACCATCTTAGATCATTCAGCAGTCGGAGGA
TTCATGACACACTGTGGTTGGAATTCAGTGCTTGAAGCCATCATCGCTGGGGTGCCGTTG
GTGACGTGGCCAGTGTTCGCTGAACAATTCTACAATGAAAAACTAGTGGAGGTTATGGGA
CTAGGAGTGAAAGTAGGGGCAGAAGTATATAACACCGACGGAGGTGCTGAGATATCGACC
CCTGTGTTAAGGAGCGAAAAGATAAAAGAAGCAATTGAGAGGTTAATGGAAAGTCAGAAA
ATAAGAGAGAAAGCAGCGAGTATGAGTAAGATGGCTAAAAATGCAGTGGAAGAAGGTGGA
TCTTCATGGAACAATCTTACCGCACTTATAGATGATATCAAGAATTTTACTTCTTCTTCA
TTGAATGAAGATCATGGATTAACAGCTTAA