Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400045113
CDS Infomation

pacid=37457924 polypeptide=PGSC0003DMP400030556 locus=PGSC0003DMG400017493 ID=PGSC0003DMT400045113.v4.03 annot-version=v4.03
Sequence

ATGCCGGAAGGAGCTTCTCGGGATTCAGCCATGGCGGAGATCTCTGAAGCACCAACTTCC
TCCGATCCACCAAACACTAAGTCCGAAGAGGAACATTTCGACCCTAAAACCATGCGTAAA
ACAAAGCCTGGATTGAAGCGTTTATTTCTCACTCTCACTGTTTTCATCTCTTTTCTCATC
GCTTTGCCTTTCTTACTTAAGTCCATAGAGATTTACCGAGCACCATTGCCTTTTGAAGAC
ATCGATTTACTATCAACCGAAATGGAGAAGAATCATTTGTTGTTCCCTTGCCAATTTCAA
GTAGTTTTTGTGAACTTTGATGATATTACTGCTGTAAATGATCTAGGGCTTTTGATCGAT
TCTCATATGCAAAAACTGACTTCAGAAAATTCTCCACCTTGTGGCGCGTGTGGTAACAAT
GTTACTGTGGCTGTAACAATTGATTCCAATTCCAACTGTATTCACAGCGAAAGCGGAAAT
GGCAACAGTAAATGGCAGTGTGGTATGTTGAATGGATTTGATAAGGTGAATGATCATGAT
GAGGATTTTGATGAGTATTTGGAGTCGGTATTGGATAGTAAGAATAGGAAGGTTTATACG
GTTGTGGTGATGAATAGGAAGCAGGAGGACGTTAGAATTGTGGTTGGAAAGTATAGGCAT
GCTTGGATAGTAGGAAATGATTCTGTAGAGAAAGCTGTTGAGAAAATGGCAGAGATTTTT
ATCAAAGTGTTTGTGAATGGTGGGAAGGAAGAAGGATCAATTCGTGGGGAATTCATGCCA
GTAGGTGCTGATGGCAAGGTCGTGCTTTCTTTCAGTCTTTTGAATTCTGATCCACATGAT
TGGGTTTATGATTGGGATTTTAAGGAATTAGATGAGATTCTGCTAGCTCCTGTGGTCGAT
GCTTTAAGACCAGTGGCTGACATTAGTGTGGAAAGCCAGGTTCTATATCATACTCCAAAG
TCTTCATATTCATATTGGGATGACACACAGGGTAGCTATATTTTCAGTACAAAAGATCTT
CCTTTCTTTGTAAATTCAAATGAATGGCACTTGGATACTTCAACAGCAGCTGGAGGGCGG
TCAAAAGTCCTGCATTTTGTGTTATATGTGCCATCTGCAAAAGAGTGCCCTCTAAAGTTG
CAGTTGCCAAATGGAGAGATTTCCATGACAAATGGTTTTATATCTCCGATGTGGGGAGGT
ATTATTGTTTGGAATCCACCGGCCTGTGTAGAGAATTTTCAAATGCAACATCTTTCCAGG
CACAAAATTTCCTCTGAGGACTTGAAGATGATTTCTGAAGTTTTCATGGGACAGTTGCGC
CAACTATTTGGTCTGAAGTCTGAGAGCCTTTACGTTGGTGGATTCGCCACATCTGTACTT
TTAACCAGTGACAAAGGCTTTGCAGAATGGGAGTTGGACGTGTTATCTAGGCATCACACA
TGTTTCAATCTTCTTCAGTGTGGCACCACCCTTGGATCTCTTTCTCGATTGGTTCAGTCA
CTTCCCAGGATGATAATCATGGATGAAATAGGAAAACAGGTAAAGTATTCTCTTGAAGCT
GCAAAATTATCTCTAGGCAATGTGTCTTTAGGATATTCTGATGCTTCTGCTGTTTCCTCA
AGAAAAGCAAGAGCGTTAGCAGAGGATGCCTTTTATCATCCATCTATGATGTCCGTGAGC
TATTACTCGTTTGAGCACTGTTTTGCTGTATATTCGCCATTCTTTCTGCCAGTTTCACTG
CATGTGCTTCTTGCAGTCATGAGAGAATGGAAAAGATATAAAGTGGAAAACAGAAAGTAC
CTTGCATGGAAGGTCAAGGTCAAAGTTGAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400030556
PEP Infomation

pacid=37457924 transcript=PGSC0003DMT400045113 locus=PGSC0003DMG400017493 ID=PGSC0003DMT400045113.v4.03 annot-version=v4.03
Sequence

MPEGASRDSAMAEISEAPTSSDPPNTKSEEEHFDPKTMRKTKPGLKRLFLTLTVFISFLI
ALPFLLKSIEIYRAPLPFEDIDLLSTEMEKNHLLFPCQFQVVFVNFDDITAVNDLGLLID
SHMQKLTSENSPPCGACGNNVTVAVTIDSNSNCIHSESGNGNSKWQCGMLNGFDKVNDHD
EDFDEYLESVLDSKNRKVYTVVVMNRKQEDVRIVVGKYRHAWIVGNDSVEKAVEKMAEIF
IKVFVNGGKEEGSIRGEFMPVGADGKVVLSFSLLNSDPHDWVYDWDFKELDEILLAPVVD
ALRPVADISVESQVLYHTPKSSYSYWDDTQGSYIFSTKDLPFFVNSNEWHLDTSTAAGGR
SKVLHFVLYVPSAKECPLKLQLPNGEISMTNGFISPMWGGIIVWNPPACVENFQMQHLSR
HKISSEDLKMISEVFMGQLRQLFGLKSESLYVGGFATSVLLTSDKGFAEWELDVLSRHHT
CFNLLQCGTTLGSLSRLVQSLPRMIIMDEIGKQVKYSLEAAKLSLGNVSLGYSDASAVSS
RKARALAEDAFYHPSMMSVSYYSFEHCFAVYSPFFLPVSLHVLLAVMREWKRYKVENRKY
LAWKVKVKVE*

Transcript Sequence

Transcript ID

PGSC0003DMT400045113
Transcript Infomation

pacid=37457924 locus=PGSC0003DMG400017493 ID=PGSC0003DMT400045113.v4.03 annot-version=v4.03
Sequence

ATGCCGGAAGGAGCTTCTCGGGATTCAGCCATGGCGGAGATCTCTGAAGCACCAACTTCC
TCCGATCCACCAAACACTAAGTCCGAAGAGGAACATTTCGACCCTAAAACCATGCGTAAA
ACAAAGCCTGGATTGAAGCGTTTATTTCTCACTCTCACTGTTTTCATCTCTTTTCTCATC
GCTTTGCCTTTCTTACTTAAGTCCATAGAGATTTACCGAGCACCATTGCCTTTTGAAGAC
ATCGATTTACTATCAACCGAAATGGAGAAGAATCATTTGTTGTTCCCTTGCCAATTTCAA
GTAGTTTTTGTGAACTTTGATGATATTACTGCTGTAAATGATCTAGGGCTTTTGATCGAT
TCTCATATGCAAAAACTGACTTCAGAAAATTCTCCACCTTGTGGCGCGTGTGGTAACAAT
GTTACTGTGGCTGTAACAATTGATTCCAATTCCAACTGTATTCACAGCGAAAGCGGAAAT
GGCAACAGTAAATGGCAGTGTGGTATGTTGAATGGATTTGATAAGGTGAATGATCATGAT
GAGGATTTTGATGAGTATTTGGAGTCGGTATTGGATAGTAAGAATAGGAAGGTTTATACG
GTTGTGGTGATGAATAGGAAGCAGGAGGACGTTAGAATTGTGGTTGGAAAGTATAGGCAT
GCTTGGATAGTAGGAAATGATTCTGTAGAGAAAGCTGTTGAGAAAATGGCAGAGATTTTT
ATCAAAGTGTTTGTGAATGGTGGGAAGGAAGAAGGATCAATTCGTGGGGAATTCATGCCA
GTAGGTGCTGATGGCAAGGTCGTGCTTTCTTTCAGTCTTTTGAATTCTGATCCACATGAT
TGGGTTTATGATTGGGATTTTAAGGAATTAGATGAGATTCTGCTAGCTCCTGTGGTCGAT
GCTTTAAGACCAGTGGCTGACATTAGTGTGGAAAGCCAGGTTCTATATCATACTCCAAAG
TCTTCATATTCATATTGGGATGACACACAGGGTAGCTATATTTTCAGTACAAAAGATCTT
CCTTTCTTTGTAAATTCAAATGAATGGCACTTGGATACTTCAACAGCAGCTGGAGGGCGG
TCAAAAGTCCTGCATTTTGTGTTATATGTGCCATCTGCAAAAGAGTGCCCTCTAAAGTTG
CAGTTGCCAAATGGAGAGATTTCCATGACAAATGGTTTTATATCTCCGATGTGGGGAGGT
ATTATTGTTTGGAATCCACCGGCCTGTGTAGAGAATTTTCAAATGCAACATCTTTCCAGG
CACAAAATTTCCTCTGAGGACTTGAAGATGATTTCTGAAGTTTTCATGGGACAGTTGCGC
CAACTATTTGGTCTGAAGTCTGAGAGCCTTTACGTTGGTGGATTCGCCACATCTGTACTT
TTAACCAGTGACAAAGGCTTTGCAGAATGGGAGTTGGACGTGTTATCTAGGCATCACACA
TGTTTCAATCTTCTTCAGTGTGGCACCACCCTTGGATCTCTTTCTCGATTGGTTCAGTCA
CTTCCCAGGATGATAATCATGGATGAAATAGGAAAACAGGTAAAGTATTCTCTTGAAGCT
GCAAAATTATCTCTAGGCAATGTGTCTTTAGGATATTCTGATGCTTCTGCTGTTTCCTCA
AGAAAAGCAAGAGCGTTAGCAGAGGATGCCTTTTATCATCCATCTATGATGTCCGTGAGC
TATTACTCGTTTGAGCACTGTTTTGCTGTATATTCGCCATTCTTTCTGCCAGTTTCACTG
CATGTGCTTCTTGCAGTCATGAGAGAATGGAAAAGATATAAAGTGGAAAACAGAAAGTAC
CTTGCATGGAAGGTCAAGGTCAAAGTTGAGTAG