Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400045066
CDS Infomation

pacid=37425769 polypeptide=PGSC0003DMP400030528 locus=PGSC0003DMG400017474 ID=PGSC0003DMT400045066.v4.03 annot-version=v4.03
Sequence

ATGTCAGGTTCACCGTCCTCATCGTCGGCATCCGAAGATGAAGATGAAGGAATCGATTCA
TACAGAAAAGGAGGATATCATGCCGTCAGAATCGGTGATTCATTTTCCGGTGGACGATAT
ATCGCTCAGCGAAAACTCGGCTGGGGAGAATTCTCTACTGTTTGGCTCGCTTACGATACT
CGATCATCCGAATTTGTAGCCTTGAAGATCCAGAAAAGTGCACCACAATTTGCTCAAGCT
GCTCTTCACGAAATTGAAGTCCTTTCTGCTATTGCCGATGGTGATCCCTCTAATAGTAAA
TATGTTGTTAGACTTATTGACCATTTTAAGCATACAGGACCAAATGGACAGCATTCATGC
ATGGTCCTTGAATTTCTTGGTGACAGCTTATTGCGTCTCGTCAAATATAATCGTTATAAA
GGCCTTGAGCTGGACAAAGTTAGGGATATATGCAAGTGCATTCTAATTGGTCTAGATTAT
TTGCACAGGGAACTTGGAATTATTCATACAGACCTAAAACTTGAAAATGTTCTTTTACTT
TCCACAATTAATGCCACACAGGATCCAATTAGATCGGGAACACCGCCCATACTTGAAAGG
CCTGAAGGGATCCCAAATGGAGGAGCAACTATGAATATTATTGAGAAAAAACTAAAACAA
AGGGCAAGGAGGGCAGCAGCCAGGATATCCGGTAGACGGGCTTCAATGGGTGGGGTGGGA
GGAGGTGCGAAAACAAATAGAAGTCTTGATGGTATTGACTTGAAGTGCAAGGTTGTGGAT
TTTGGAAGTGCATGCTGGGCTGACAAGCAGTTTGCACAAGAAATTCAGACACGACAGTAT
AGATCTCCAGAAGTTATACTTCAGTCTGGATATTCATTCTCTGCTGACATGTGGTCTTTT
GCTTGTATTGCATTTGAGCTTGCCACTGGTGAGATGATGTTCACACCCAAAGGTGGACAA
GGGTTCAGTGAAGATGAGGATCACCTTGCTATGATGATGGAGCTTCTAGGAAAGATACCT
CGGAAGATAGCCAATGGTGGGGCTCGATCTAAAGATTACTTTGACAGATACGGAGATTTG
AAGAGGATCCGGAGGCTGAAGTATGGGTCTTTAGAAAAATTACTTATCGACAAGTTCAGG
TTTTCTGAAACTGATGCTCTTGAATTTGCCAAATTTCTTTGTCCCCTTCTTGATTTCGAG
CCAGAGAATCGACCAACTGCTCAGCAGTGCTCGCAACACCCATGGCTCAACATTACAAGT
CAAAACCAAACAGAGGTGAAGAGTGAATCTGGTCTGGAAAAGGTTAATGTTGGGATGAGA
AACCTACAAATGAAGGCTGGTAAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400030528
PEP Infomation

pacid=37425769 transcript=PGSC0003DMT400045066 locus=PGSC0003DMG400017474 ID=PGSC0003DMT400045066.v4.03 annot-version=v4.03
Sequence

MSGSPSSSSASEDEDEGIDSYRKGGYHAVRIGDSFSGGRYIAQRKLGWGEFSTVWLAYDT
RSSEFVALKIQKSAPQFAQAALHEIEVLSAIADGDPSNSKYVVRLIDHFKHTGPNGQHSC
MVLEFLGDSLLRLVKYNRYKGLELDKVRDICKCILIGLDYLHRELGIIHTDLKLENVLLL
STINATQDPIRSGTPPILERPEGIPNGGATMNIIEKKLKQRARRAAARISGRRASMGGVG
GGAKTNRSLDGIDLKCKVVDFGSACWADKQFAQEIQTRQYRSPEVILQSGYSFSADMWSF
ACIAFELATGEMMFTPKGGQGFSEDEDHLAMMMELLGKIPRKIANGGARSKDYFDRYGDL
KRIRRLKYGSLEKLLIDKFRFSETDALEFAKFLCPLLDFEPENRPTAQQCSQHPWLNITS
QNQTEVKSESGLEKVNVGMRNLQMKAGK*

Transcript Sequence

Transcript ID

PGSC0003DMT400045066
Transcript Infomation

pacid=37425769 locus=PGSC0003DMG400017474 ID=PGSC0003DMT400045066.v4.03 annot-version=v4.03
Sequence

ATGTCAGGTTCACCGTCCTCATCGTCGGCATCCGAAGATGAAGATGAAGGAATCGATTCA
TACAGAAAAGGAGGATATCATGCCGTCAGAATCGGTGATTCATTTTCCGGTGGACGATAT
ATCGCTCAGCGAAAACTCGGCTGGGGAGAATTCTCTACTGTTTGGCTCGCTTACGATACT
CGATCATCCGAATTTGTAGCCTTGAAGATCCAGAAAAGTGCACCACAATTTGCTCAAGCT
GCTCTTCACGAAATTGAAGTCCTTTCTGCTATTGCCGATGGTGATCCCTCTAATAGTAAA
TATGTTGTTAGACTTATTGACCATTTTAAGCATACAGGACCAAATGGACAGCATTCATGC
ATGGTCCTTGAATTTCTTGGTGACAGCTTATTGCGTCTCGTCAAATATAATCGTTATAAA
GGCCTTGAGCTGGACAAAGTTAGGGATATATGCAAGTGCATTCTAATTGGTCTAGATTAT
TTGCACAGGGAACTTGGAATTATTCATACAGACCTAAAACTTGAAAATGTTCTTTTACTT
TCCACAATTAATGCCACACAGGATCCAATTAGATCGGGAACACCGCCCATACTTGAAAGG
CCTGAAGGGATCCCAAATGGAGGAGCAACTATGAATATTATTGAGAAAAAACTAAAACAA
AGGGCAAGGAGGGCAGCAGCCAGGATATCCGGTAGACGGGCTTCAATGGGTGGGGTGGGA
GGAGGTGCGAAAACAAATAGAAGTCTTGATGGTATTGACTTGAAGTGCAAGGTTGTGGAT
TTTGGAAGTGCATGCTGGGCTGACAAGCAGTTTGCACAAGAAATTCAGACACGACAGTAT
AGATCTCCAGAAGTTATACTTCAGTCTGGATATTCATTCTCTGCTGACATGTGGTCTTTT
GCTTGTATTGCATTTGAGCTTGCCACTGGTGAGATGATGTTCACACCCAAAGGTGGACAA
GGGTTCAGTGAAGATGAGGATCACCTTGCTATGATGATGGAGCTTCTAGGAAAGATACCT
CGGAAGATAGCCAATGGTGGGGCTCGATCTAAAGATTACTTTGACAGATACGGAGATTTG
AAGAGGATCCGGAGGCTGAAGTATGGGTCTTTAGAAAAATTACTTATCGACAAGTTCAGG
TTTTCTGAAACTGATGCTCTTGAATTTGCCAAATTTCTTTGTCCCCTTCTTGATTTCGAG
CCAGAGAATCGACCAACTGCTCAGCAGTGCTCGCAACACCCATGGCTCAACATTACAAGT
CAAAACCAAACAGAGGTGAAGAGTGAATCTGGTCTGGAAAAGGTTAATGTTGGGATGAGA
AACCTACAAATGAAGGCTGGTAAGTGA