Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400045050
CDS Infomation

pacid=37442522 polypeptide=PGSC0003DMP400030518 locus=PGSC0003DMG400017465 ID=PGSC0003DMT400045050.v4.03 annot-version=v4.03
Sequence

ATGAGTGTTGAAGAGGCTATTCAAGATAAGAGATTGTTTATACTTGATTATCATGACATG
CTTTTGCCTTTTATTGGGAAGATGAACTCCTTGCCGGGGAGAAAAGCTTATGCATCAAGA
ACACTTTTCTTCTATACATCCAGAGGTGTTCTAAAGCCAATTGTCGTTGAACTTTCACTG
CCTCCGACACCTTCTTCACCTAGGAACAAGCGTATATTCTCCCATGGACAAGATGCAACC
AATCACTGGATATGGAATCTAGCCAAAGCACATGTTTGTTCAAATGATGCTGGTGTCCAT
CAGTTGGTGAACCACTGGTTAAGGACTCATGCTTGTATGGAACCATATATCATTGCAACC
CATAGGCATCTTAGCTCAATGCACCCAATTTATAAGCTACTTCACCCTCATATGCGCTAC
ACGCTGGAAATCAATGCGCTTGCAAGGCAGAGTTTGATAAATGGGGGTGGAGTTATTGAA
GCATGTTTTAGTCCTGGAAGGTATTCAATGGAAATAAGTTCCGCCGCTTACAAGAGCATG
TGGCGGTTTGATATGGAAGCACTGCCTGCAGATTTAATAAGAAGGGGAATGGCTGTGGAG
GATACATCGATGCCTTTGGGGGTGAAACTGGTGATTGAAGACTACCCTTATGCAGCAGAT
GGCCTTCTCATATGGTCTGCAATAAAAGAATATGTGGAGTCCTATGTTGATTACTACTAT
TCCGAGCCTAATTCTGTCACGTCTGACCTTGAGCTCCAGGGCTGGTGGAATGAGATCAAG
AATAAGGGACACGTGGATAAGAAAAATGAGCCTTGGTGGCCAAAGCTTGTTACTAAAGAA
GACTTGTCTGGCATACTCACCACAATGATCTGGACTGCCTCAGCCCAACATGCAGCAATA
AACTTCGGGCAGTACCCTTTCGGAGGTTATGTACCTAACCGTCCTACCCTTATGCGAAAG
CTCATTCCACATGAAGATGATCCCAGCTATGAGAACTTTATTCTTCACCCTGAGTACACT
TTTCTTGCATCTTTGCCTACTCAACTCCAAGCTACTAAAGTGATGGCTGTTAAAGATACC
TTGTCGACTCATTCAGCAGACGAGGAATACATGTATCAGTTACACGAAATTCAACAATTC
TCCGTAAATGATCATGAAATTTTGGAGATTTTGAAAAGATTCTCTGCCAAATTAAAGGAG
ATAGAAGATACCATCAACCAACGAAACAAGGATATCCGTCTTAAGAATCGAAGTGGTGCT
GGTGTTCCTCCATATGAACTGCTGCTACCTACTTCTGGTCCTGGTGTTACCTGTCGCGGT
ATTCCGAACAGCATCTCTATCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400030518
PEP Infomation

pacid=37442522 transcript=PGSC0003DMT400045050 locus=PGSC0003DMG400017465 ID=PGSC0003DMT400045050.v4.03 annot-version=v4.03
Sequence

MSVEEAIQDKRLFILDYHDMLLPFIGKMNSLPGRKAYASRTLFFYTSRGVLKPIVVELSL
PPTPSSPRNKRIFSHGQDATNHWIWNLAKAHVCSNDAGVHQLVNHWLRTHACMEPYIIAT
HRHLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGVIEACFSPGRYSMEISSAAYKSM
WRFDMEALPADLIRRGMAVEDTSMPLGVKLVIEDYPYAADGLLIWSAIKEYVESYVDYYY
SEPNSVTSDLELQGWWNEIKNKGHVDKKNEPWWPKLVTKEDLSGILTTMIWTASAQHAAI
NFGQYPFGGYVPNRPTLMRKLIPHEDDPSYENFILHPEYTFLASLPTQLQATKVMAVKDT
LSTHSADEEYMYQLHEIQQFSVNDHEILEILKRFSAKLKEIEDTINQRNKDIRLKNRSGA
GVPPYELLLPTSGPGVTCRGIPNSISI*

Transcript Sequence

Transcript ID

PGSC0003DMT400045050
Transcript Infomation

pacid=37442522 locus=PGSC0003DMG400017465 ID=PGSC0003DMT400045050.v4.03 annot-version=v4.03
Sequence

ATGAGTGTTGAAGAGGCTATTCAAGATAAGAGATTGTTTATACTTGATTATCATGACATG
CTTTTGCCTTTTATTGGGAAGATGAACTCCTTGCCGGGGAGAAAAGCTTATGCATCAAGA
ACACTTTTCTTCTATACATCCAGAGGTGTTCTAAAGCCAATTGTCGTTGAACTTTCACTG
CCTCCGACACCTTCTTCACCTAGGAACAAGCGTATATTCTCCCATGGACAAGATGCAACC
AATCACTGGATATGGAATCTAGCCAAAGCACATGTTTGTTCAAATGATGCTGGTGTCCAT
CAGTTGGTGAACCACTGGTTAAGGACTCATGCTTGTATGGAACCATATATCATTGCAACC
CATAGGCATCTTAGCTCAATGCACCCAATTTATAAGCTACTTCACCCTCATATGCGCTAC
ACGCTGGAAATCAATGCGCTTGCAAGGCAGAGTTTGATAAATGGGGGTGGAGTTATTGAA
GCATGTTTTAGTCCTGGAAGGTATTCAATGGAAATAAGTTCCGCCGCTTACAAGAGCATG
TGGCGGTTTGATATGGAAGCACTGCCTGCAGATTTAATAAGAAGGGGAATGGCTGTGGAG
GATACATCGATGCCTTTGGGGGTGAAACTGGTGATTGAAGACTACCCTTATGCAGCAGAT
GGCCTTCTCATATGGTCTGCAATAAAAGAATATGTGGAGTCCTATGTTGATTACTACTAT
TCCGAGCCTAATTCTGTCACGTCTGACCTTGAGCTCCAGGGCTGGTGGAATGAGATCAAG
AATAAGGGACACGTGGATAAGAAAAATGAGCCTTGGTGGCCAAAGCTTGTTACTAAAGAA
GACTTGTCTGGCATACTCACCACAATGATCTGGACTGCCTCAGCCCAACATGCAGCAATA
AACTTCGGGCAGTACCCTTTCGGAGGTTATGTACCTAACCGTCCTACCCTTATGCGAAAG
CTCATTCCACATGAAGATGATCCCAGCTATGAGAACTTTATTCTTCACCCTGAGTACACT
TTTCTTGCATCTTTGCCTACTCAACTCCAAGCTACTAAAGTGATGGCTGTTAAAGATACC
TTGTCGACTCATTCAGCAGACGAGGAATACATGTATCAGTTACACGAAATTCAACAATTC
TCCGTAAATGATCATGAAATTTTGGAGATTTTGAAAAGATTCTCTGCCAAATTAAAGGAG
ATAGAAGATACCATCAACCAACGAAACAAGGATATCCGTCTTAAGAATCGAAGTGGTGCT
GGTGTTCCTCCATATGAACTGCTGCTACCTACTTCTGGTCCTGGTGTTACCTGTCGCGGT
ATTCCGAACAGCATCTCTATCTGA