Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400045033
CDS Infomation

pacid=37445001 polypeptide=PGSC0003DMP400030505 locus=PGSC0003DMG400017461 ID=PGSC0003DMT400045033.v4.03 annot-version=v4.03
Sequence

ATGCCTCCTTCACCGGCTATGAGATGCTCTCCTGGAAGGGAGCTCAGGGCAGAAAATCAC
AAGAGAGGGCGCAGTCTTGAAAGTGGGATTCATTTGAGGGACAGGGATGATGATCTTTCC
CTGTTTAATGAGGTGCAAACCAGGGAAAGAGATAATTTCTTGCTTCAATCAAATGATGAA
ATCGAAGACTTATTTTCTACTAAATTGAGGTATTTTTCGGATTATAAGTTGGGAATATCA
ATTCCAGCTCGAGGAGAGAGTAGTGACCTTCTTAATGCGGAAGGCGATAAGAATGACTAT
GACTGGTTATTGACCCCTCCGGACACTCCTCTTTTTCCTTCTTTGGATGACGAGAGTCAT
GAGACACGCCCGACAAATCATGAGCAGAGGGGCCGGCCTAGAAGCCAACCCATTTCAATC
TCTAGATCATCAACGATGGACAAGAGTCACAGAAGTAGTAGAGGTAGTGCCAGTCCGAAT
CGCCTTAGCCCATCTCCTAGGTCTGGCTATACTGCCGATCAATCAAGAGGAAGACCATCT
TCAACACCTCATTCAAGTCCACCGCCTAATTTGCGGCATTCTACTCCGACAAGGAAACCG
TCTCCCTCACCTAAGAAATTCTCAACACCTCCTCCAAGGTCGTCTACACCAACTCCTCGG
AGGTTGAGCACAGGCTCCAGTGGTACTGCTGCTCCATCGCAAGTGAGGGGCACCTCTCCT
GTCAAGACTAGTAGAGGGAACTCTGCATCACCAAAGATAAGGGCGTGGCAGTCAAATATT
CCAGGATTTTCCTTGGAGGCACCTCCCAATCTTCGTACTTCACTGGGTGATCGCCCTGCT
TCCTATGTGAGGGGGTCTTCTCCTGCATCCAGAAGTGGATCAAGGTCTGGAAGACAATCG
ATGTCTCCGACTGCTTCTCGAAGTGTCAGTTCATCACATAGTCATGATCGCGACCCTTTT
AGTTCTCACAGTAAAGGTTCAGTTGCATCGTCTGGTGATGACGACATAGATTCTCTACAA
TCCATTCCTGTGAGCCGTTCAGATCGTTCAGGTTCAAGAAGTATCAGTGGATTCCAAAAT
AAGAAAGCTCTTGGCCATCCAAAGAAGCCAGCAAGAGTAGTGTCCTCTAGTTCTGCTCCA
AAGAGATCCTTTGACATGGCAATCCGGCAAATGGATCACAAGAAATCTCCCCAGAATATG
TTCAGGCCTCTCTTATCAAGTGTCCCCAGTTCAACCTTCTACGCTGGAAAAGCAAGCACC
ACTCATCATTCTATAATTTCCAGAAACTCCTCCATCACAAGTAGCAGTAATGCTAGCTCT
GATCAAGCTACAACTGGACTACATGACAATGAAGGAAGCGAACAAAACCAGGAGGATATA
GGTAATGATCAAGTAAAGACAACATATGCTGATTTGCAGGATGAAGTTTTTGACCTTGAC
AAGGCTGATTCTACAAGTGAAGATCTTGGGAAACAAATCTATGATAGGGTCTCTTGCAGT
CAACTTGGTGATCCTGATGGTGACCTGAGGGTTGATTCTCTACTTGTTGGCTCTAAAATT
TGCAGTCCACATGATAAAGCTTTGGAAATGGTAGCAGATGTGGAATTCTTGAACTCGAAT
GCAAGCATTTCCCACGTGAATGCTCTAGAAGATGCTGTACTGTGTTCTAGATGTGGTCAA
TGGTACTATTACACTGAATCATTTGATGGGGATCTGAAGCTTTGTCAAGATTGTGTTCAT
TCAGAAGTACAATTGTGTGCTACTCCCCCGTTAAGTTCGGTAGCTGGTGAGAATTCTCCT
GAAACTTTGACTGCAATCCTAGACAGATCAGTTGATGGTTTTGAATCAGCTGGGAATTCA
CATGATTCCTCAGAAGCAACTGGCAATAATAGATTAGCGGAATATCATCATAGATTGAGT
CCAGATGAGGGTGAGAAGGCTTATATGAAGTCAAATGTAAATGAAGGTGTGCAAAGCCAC
CAAGCAATGGCTCAGTCACCTAATGCTGATATCAGCTCCAAGCTTGTTCAGAATGCTGAA
AAAAGAGAAGGTGCAGGTATTTCAGTGCTGCTGAATAGATCAAGTAGTGGGAAGGGGAAC
ATTGTTCAGAACAGGACACTTTCTGCCACTAATATAAATTATGATGATTTATCATATGTA
CGAGATGCAGTGAACAACAGCTTGAGAAGCTCCACTGGATATGGTAGTGCATCTGCTTCA
TCATCCATTGATTTGGGCTCCACTGGTCATACAGAAACTCGCTTCCAGCGGCAATTAAGT
GGAAGGAAACTTGACTTGGAAAATTATCGGAATCAGAATGATAGAAAGCTCCAAAGCTCC
AACTCATCCTTGTCTGGAACTTCAAGTCATGCAGTACAAACTTTAAGCATTGTGACAAGT
TCCCTTGAAGAGTCCTTCGAAACGTCTGCTTCTGCCGACTTGCAAAAGAATATTGAGGTA
GCATATGTTGATCGAGAAAAAGAACTGCTGCATGGAGAAAATACAAAAGTGGACAACTTG
CGCGCTGAGGTTGAGAGTGATGATAATTGTAGAATTGCCTCCAAGTCAGTGGATCACACA
GGATCTGTGCCATCAGTTGCAAATTTTGAGGAGTTCAGTTCATATATGAATTGTGAAAAC
TTGGCAAACTCGGACAATTCTGTGAATGTGGATCCTTGTGATTTGATTTCTGAAACTCGT
CCTATTGAGGAAGATGTGTCAAATTCTTCGGTTGATAAAGTAGAGATTGTGGCTTCTTTG
AATCAGAGCTCACTACATGCAATATCTGAGATGGAAATTGAGAATGGACATGTGGGTTCT
CTTGATTTACAATCTGATGTTTGCTCCTTGCACTCAGAGAGCAGCATAGATGAATTAAAT
GAGCAGTTCTTGCATGCAGCGTCTGGTGATGGCAATGAAATATTAGCATCTGTTGACAGA
GCTGATTCCATTGATCACAAGGACATCGTTCGTGAAGAATCAACTGTTACACTGGAGGGG
CAAGGAGGTAACAAGCCAAGAAGCTTGACACTAGAAGAAGCTACTGATACAATACTGTTT
TGTAGCTCCATTGTACATGACCTTGCATATCGAGCTGCAAACATAGCTATTGAAAAAGAG
AATTCAGTTCTGTTGAAAGATTCACGGCCCACAGTGACTATAGTGGGCAAAGCGAATTCT
GACAGAAGGGATCCGCATAGTAGAATCTCAGGTAGACGTAATTCTAAGTCCTCTCAAAAG
GCTAGGCAGAAGATGGAGGTGGACACAAAGCCTCCTCAAAGCAACACCAACACGGAAAGT
GATGAGAAAACGGACAAATCCACAACTCGCATTGTTGGAGCTCCTATTAAAGGTGACAGC
TTGAATCCTCCAAAGCTGGAATCCAAATGCAACTGCACCATAATGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400030505
PEP Infomation

pacid=37445001 transcript=PGSC0003DMT400045033 locus=PGSC0003DMG400017461 ID=PGSC0003DMT400045033.v4.03 annot-version=v4.03
Sequence

MPPSPAMRCSPGRELRAENHKRGRSLESGIHLRDRDDDLSLFNEVQTRERDNFLLQSNDE
IEDLFSTKLRYFSDYKLGISIPARGESSDLLNAEGDKNDYDWLLTPPDTPLFPSLDDESH
ETRPTNHEQRGRPRSQPISISRSSTMDKSHRSSRGSASPNRLSPSPRSGYTADQSRGRPS
STPHSSPPPNLRHSTPTRKPSPSPKKFSTPPPRSSTPTPRRLSTGSSGTAAPSQVRGTSP
VKTSRGNSASPKIRAWQSNIPGFSLEAPPNLRTSLGDRPASYVRGSSPASRSGSRSGRQS
MSPTASRSVSSSHSHDRDPFSSHSKGSVASSGDDDIDSLQSIPVSRSDRSGSRSISGFQN
KKALGHPKKPARVVSSSSAPKRSFDMAIRQMDHKKSPQNMFRPLLSSVPSSTFYAGKAST
THHSIISRNSSITSSSNASSDQATTGLHDNEGSEQNQEDIGNDQVKTTYADLQDEVFDLD
KADSTSEDLGKQIYDRVSCSQLGDPDGDLRVDSLLVGSKICSPHDKALEMVADVEFLNSN
ASISHVNALEDAVLCSRCGQWYYYTESFDGDLKLCQDCVHSEVQLCATPPLSSVAGENSP
ETLTAILDRSVDGFESAGNSHDSSEATGNNRLAEYHHRLSPDEGEKAYMKSNVNEGVQSH
QAMAQSPNADISSKLVQNAEKREGAGISVLLNRSSSGKGNIVQNRTLSATNINYDDLSYV
RDAVNNSLRSSTGYGSASASSSIDLGSTGHTETRFQRQLSGRKLDLENYRNQNDRKLQSS
NSSLSGTSSHAVQTLSIVTSSLEESFETSASADLQKNIEVAYVDREKELLHGENTKVDNL
RAEVESDDNCRIASKSVDHTGSVPSVANFEEFSSYMNCENLANSDNSVNVDPCDLISETR
PIEEDVSNSSVDKVEIVASLNQSSLHAISEMEIENGHVGSLDLQSDVCSLHSESSIDELN
EQFLHAASGDGNEILASVDRADSIDHKDIVREESTVTLEGQGGNKPRSLTLEEATDTILF
CSSIVHDLAYRAANIAIEKENSVLLKDSRPTVTIVGKANSDRRDPHSRISGRRNSKSSQK
ARQKMEVDTKPPQSNTNTESDEKTDKSTTRIVGAPIKGDSLNPPKLESKCNCTIM*

Transcript Sequence

Transcript ID

PGSC0003DMT400045033
Transcript Infomation

pacid=37445001 locus=PGSC0003DMG400017461 ID=PGSC0003DMT400045033.v4.03 annot-version=v4.03
Sequence

ATGCCTCCTTCACCGGCTATGAGATGCTCTCCTGGAAGGGAGCTCAGGGCAGAAAATCAC
AAGAGAGGGCGCAGTCTTGAAAGTGGGATTCATTTGAGGGACAGGGATGATGATCTTTCC
CTGTTTAATGAGGTGCAAACCAGGGAAAGAGATAATTTCTTGCTTCAATCAAATGATGAA
ATCGAAGACTTATTTTCTACTAAATTGAGGTATTTTTCGGATTATAAGTTGGGAATATCA
ATTCCAGCTCGAGGAGAGAGTAGTGACCTTCTTAATGCGGAAGGCGATAAGAATGACTAT
GACTGGTTATTGACCCCTCCGGACACTCCTCTTTTTCCTTCTTTGGATGACGAGAGTCAT
GAGACACGCCCGACAAATCATGAGCAGAGGGGCCGGCCTAGAAGCCAACCCATTTCAATC
TCTAGATCATCAACGATGGACAAGAGTCACAGAAGTAGTAGAGGTAGTGCCAGTCCGAAT
CGCCTTAGCCCATCTCCTAGGTCTGGCTATACTGCCGATCAATCAAGAGGAAGACCATCT
TCAACACCTCATTCAAGTCCACCGCCTAATTTGCGGCATTCTACTCCGACAAGGAAACCG
TCTCCCTCACCTAAGAAATTCTCAACACCTCCTCCAAGGTCGTCTACACCAACTCCTCGG
AGGTTGAGCACAGGCTCCAGTGGTACTGCTGCTCCATCGCAAGTGAGGGGCACCTCTCCT
GTCAAGACTAGTAGAGGGAACTCTGCATCACCAAAGATAAGGGCGTGGCAGTCAAATATT
CCAGGATTTTCCTTGGAGGCACCTCCCAATCTTCGTACTTCACTGGGTGATCGCCCTGCT
TCCTATGTGAGGGGGTCTTCTCCTGCATCCAGAAGTGGATCAAGGTCTGGAAGACAATCG
ATGTCTCCGACTGCTTCTCGAAGTGTCAGTTCATCACATAGTCATGATCGCGACCCTTTT
AGTTCTCACAGTAAAGGTTCAGTTGCATCGTCTGGTGATGACGACATAGATTCTCTACAA
TCCATTCCTGTGAGCCGTTCAGATCGTTCAGGTTCAAGAAGTATCAGTGGATTCCAAAAT
AAGAAAGCTCTTGGCCATCCAAAGAAGCCAGCAAGAGTAGTGTCCTCTAGTTCTGCTCCA
AAGAGATCCTTTGACATGGCAATCCGGCAAATGGATCACAAGAAATCTCCCCAGAATATG
TTCAGGCCTCTCTTATCAAGTGTCCCCAGTTCAACCTTCTACGCTGGAAAAGCAAGCACC
ACTCATCATTCTATAATTTCCAGAAACTCCTCCATCACAAGTAGCAGTAATGCTAGCTCT
GATCAAGCTACAACTGGACTACATGACAATGAAGGAAGCGAACAAAACCAGGAGGATATA
GGTAATGATCAAGTAAAGACAACATATGCTGATTTGCAGGATGAAGTTTTTGACCTTGAC
AAGGCTGATTCTACAAGTGAAGATCTTGGGAAACAAATCTATGATAGGGTCTCTTGCAGT
CAACTTGGTGATCCTGATGGTGACCTGAGGGTTGATTCTCTACTTGTTGGCTCTAAAATT
TGCAGTCCACATGATAAAGCTTTGGAAATGGTAGCAGATGTGGAATTCTTGAACTCGAAT
GCAAGCATTTCCCACGTGAATGCTCTAGAAGATGCTGTACTGTGTTCTAGATGTGGTCAA
TGGTACTATTACACTGAATCATTTGATGGGGATCTGAAGCTTTGTCAAGATTGTGTTCAT
TCAGAAGTACAATTGTGTGCTACTCCCCCGTTAAGTTCGGTAGCTGGTGAGAATTCTCCT
GAAACTTTGACTGCAATCCTAGACAGATCAGTTGATGGTTTTGAATCAGCTGGGAATTCA
CATGATTCCTCAGAAGCAACTGGCAATAATAGATTAGCGGAATATCATCATAGATTGAGT
CCAGATGAGGGTGAGAAGGCTTATATGAAGTCAAATGTAAATGAAGGTGTGCAAAGCCAC
CAAGCAATGGCTCAGTCACCTAATGCTGATATCAGCTCCAAGCTTGTTCAGAATGCTGAA
AAAAGAGAAGGTGCAGGTATTTCAGTGCTGCTGAATAGATCAAGTAGTGGGAAGGGGAAC
ATTGTTCAGAACAGGACACTTTCTGCCACTAATATAAATTATGATGATTTATCATATGTA
CGAGATGCAGTGAACAACAGCTTGAGAAGCTCCACTGGATATGGTAGTGCATCTGCTTCA
TCATCCATTGATTTGGGCTCCACTGGTCATACAGAAACTCGCTTCCAGCGGCAATTAAGT
GGAAGGAAACTTGACTTGGAAAATTATCGGAATCAGAATGATAGAAAGCTCCAAAGCTCC
AACTCATCCTTGTCTGGAACTTCAAGTCATGCAGTACAAACTTTAAGCATTGTGACAAGT
TCCCTTGAAGAGTCCTTCGAAACGTCTGCTTCTGCCGACTTGCAAAAGAATATTGAGGTA
GCATATGTTGATCGAGAAAAAGAACTGCTGCATGGAGAAAATACAAAAGTGGACAACTTG
CGCGCTGAGGTTGAGAGTGATGATAATTGTAGAATTGCCTCCAAGTCAGTGGATCACACA
GGATCTGTGCCATCAGTTGCAAATTTTGAGGAGTTCAGTTCATATATGAATTGTGAAAAC
TTGGCAAACTCGGACAATTCTGTGAATGTGGATCCTTGTGATTTGATTTCTGAAACTCGT
CCTATTGAGGAAGATGTGTCAAATTCTTCGGTTGATAAAGTAGAGATTGTGGCTTCTTTG
AATCAGAGCTCACTACATGCAATATCTGAGATGGAAATTGAGAATGGACATGTGGGTTCT
CTTGATTTACAATCTGATGTTTGCTCCTTGCACTCAGAGAGCAGCATAGATGAATTAAAT
GAGCAGTTCTTGCATGCAGCGTCTGGTGATGGCAATGAAATATTAGCATCTGTTGACAGA
GCTGATTCCATTGATCACAAGGACATCGTTCGTGAAGAATCAACTGTTACACTGGAGGGG
CAAGGAGGTAACAAGCCAAGAAGCTTGACACTAGAAGAAGCTACTGATACAATACTGTTT
TGTAGCTCCATTGTACATGACCTTGCATATCGAGCTGCAAACATAGCTATTGAAAAAGAG
AATTCAGTTCTGTTGAAAGATTCACGGCCCACAGTGACTATAGTGGGCAAAGCGAATTCT
GACAGAAGGGATCCGCATAGTAGAATCTCAGGTAGACGTAATTCTAAGTCCTCTCAAAAG
GCTAGGCAGAAGATGGAGGTGGACACAAAGCCTCCTCAAAGCAACACCAACACGGAAAGT
GATGAGAAAACGGACAAATCCACAACTCGCATTGTTGGAGCTCCTATTAAAGGTGACAGC
TTGAATCCTCCAAAGCTGGAATCCAAATGCAACTGCACCATAATGTGA