Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400045028
CDS Infomation

pacid=37444421 polypeptide=PGSC0003DMP400030501 locus=PGSC0003DMG400017459 ID=PGSC0003DMT400045028.v4.03 annot-version=v4.03
Sequence

ATGGCTTCCTCTGCTTCTGGATCGGCTATTATGGCAGCGGGAATCACAATGACTGACACC
GGCGGCCACAAAATCTGTCATTTCCGGCAACCTTTTTTGTCTAATACACTCCACCCCATA
AACTACTCCAACTTGCAACGCAGATCAAACACCAAAACTCCATTTTCCTCTGTTGTAAAA
GCACAAGCTGTCACAGTTGAACAAGCAGCTGCTCAAGTTGCTCCTAAAACTGAGGCTCCT
GTTGTTATTGTTACTGGAGCTTCCAGAGGTATTGGTAAAGCTATTTCATTGGCTCTTGGG
AAAGCTGGATGTAAGGTTCTTGTTAATTATGCAAGGTCATCCAAGGAGGCTGAAGAAGTT
TGCAAAGAGATTGAGGCATGTGGTGGCCAGGCTCTTAGTTTTGGCGGAGATGTTTCCAAA
GAAGCAGATGTGGAAGCTATGATAAAAACTGCAGTTGATGCTTGGGGAACTGTAGATGTT
TTAATAAATAATGCAGGTATTACAAGAGATGGTTTATTAATGAGAATGACTACTAAACAG
TGGCAGGAGGTTATTGATCTAAATCTAACTGGTGTATATCTCTGTACACAGGCGGCAGCC
AAGATTATGATGAAGAAGAAAAAGGGTAAGATAATCAATATAGCATCAGTAGTTGGCCTT
GTTGGCAATTTTGGGCAATCTAACTATAGTGCAGCAAAGGCTGGTGTTATTGGTCTGACT
AAAACTGTGGCCAAGGAATATGCAAGTAGAAATATTAATGTGAATGCTGTTGCCCCTGGG
TTCATTGCATCCGATATGACTGCTAAGCTAGGGGATGACATCGAGAAAAAGATTTTGGGC
CAAATCCCATTAGGAAGGTATGGTCAACCAGAAGAAGTTGCTGGAGTTGTGGAATTCTTG
GCCATTAATCCAGCATCAAATTACATCACTGGCCAGGTTTTAACTATTGATGGGGGTATG
GTGATGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400030501
PEP Infomation

pacid=37444421 transcript=PGSC0003DMT400045028 locus=PGSC0003DMG400017459 ID=PGSC0003DMT400045028.v4.03 annot-version=v4.03
Sequence

MASSASGSAIMAAGITMTDTGGHKICHFRQPFLSNTLHPINYSNLQRRSNTKTPFSSVVK
AQAVTVEQAAAQVAPKTEAPVVIVTGASRGIGKAISLALGKAGCKVLVNYARSSKEAEEV
CKEIEACGGQALSFGGDVSKEADVEAMIKTAVDAWGTVDVLINNAGITRDGLLMRMTTKQ
WQEVIDLNLTGVYLCTQAAAKIMMKKKKGKIINIASVVGLVGNFGQSNYSAAKAGVIGLT
KTVAKEYASRNINVNAVAPGFIASDMTAKLGDDIEKKILGQIPLGRYGQPEEVAGVVEFL
AINPASNYITGQVLTIDGGMVM*

Transcript Sequence

Transcript ID

PGSC0003DMT400045028
Transcript Infomation

pacid=37444421 locus=PGSC0003DMG400017459 ID=PGSC0003DMT400045028.v4.03 annot-version=v4.03
Sequence

ATGGCTTCCTCTGCTTCTGGATCGGCTATTATGGCAGCGGGAATCACAATGACTGACACC
GGCGGCCACAAAATCTGTCATTTCCGGCAACCTTTTTTGTCTAATACACTCCACCCCATA
AACTACTCCAACTTGCAACGCAGATCAAACACCAAAACTCCATTTTCCTCTGTTGTAAAA
GCACAAGCTGTCACAGTTGAACAAGCAGCTGCTCAAGTTGCTCCTAAAACTGAGGCTCCT
GTTGTTATTGTTACTGGAGCTTCCAGAGGTATTGGTAAAGCTATTTCATTGGCTCTTGGG
AAAGCTGGATGTAAGGTTCTTGTTAATTATGCAAGGTCATCCAAGGAGGCTGAAGAAGTT
TGCAAAGAGATTGAGGCATGTGGTGGCCAGGCTCTTAGTTTTGGCGGAGATGTTTCCAAA
GAAGCAGATGTGGAAGCTATGATAAAAACTGCAGTTGATGCTTGGGGAACTGTAGATGTT
TTAATAAATAATGCAGGTATTACAAGAGATGGTTTATTAATGAGAATGACTACTAAACAG
TGGCAGGAGGTTATTGATCTAAATCTAACTGGTGTATATCTCTGTACACAGGCGGCAGCC
AAGATTATGATGAAGAAGAAAAAGGGTAAGATAATCAATATAGCATCAGTAGTTGGCCTT
GTTGGCAATTTTGGGCAATCTAACTATAGTGCAGCAAAGGCTGGTGTTATTGGTCTGACT
AAAACTGTGGCCAAGGAATATGCAAGTAGAAATATTAATGTGAATGCTGTTGCCCCTGGG
TTCATTGCATCCGATATGACTGCTAAGCTAGGGGATGACATCGAGAAAAAGATTTTGGGC
CAAATCCCATTAGGAAGGTATGGTCAACCAGAAGAAGTTGCTGGAGTTGTGGAATTCTTG
GCCATTAATCCAGCATCAAATTACATCACTGGCCAGGTTTTAACTATTGATGGGGGTATG
GTGATGTAA