Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400045008
CDS Infomation

pacid=37445135 polypeptide=PGSC0003DMP400030494 locus=PGSC0003DMG400017455 ID=PGSC0003DMT400045008.v4.03 annot-version=v4.03
Sequence

ATGATCAAGCAGATATTTGGTAAGAAGAAGCAGTCGAAAACGGCTGGTTCAACTAGTTCA
AAGAAAAGTGATGGAGGAAGTAAAAAGGTTGGGGTATCAGCTAATACTGTTATTTCAGCT
CCTTATTCTGTTTCAGCTTCAACGGGGGATAAATTTGTTCGAGATGGGAGTTTAAAGCTT
AATGGGAATCTCGTTGCAGCTTCTTACGATGCATTGCCTAGTTTTAGGGATGTTCCCAAT
GCTGAGAAACACAACTTGTTTATTAGGAAGCTTAATATGTGTTGTGTTTTGTTTGATTTT
ACTGATCCTACAAAGAACCTTAAAGAAAAGGAAATCAAGCGACAGACGTTATTGGAGCTT
GTGGAGTATGTCACGTCTGCAAACGTGAAATTTACAGAAATGGTGATGCAATCAGTAGTA
AAGATGGTGTCGACTAATTTGTTTAGGGAACTCATGCCCCAGCCTCGAGAAAACAAGACG
TTGGCCTTTGATGTGGAAGAGGATGAACCTGCGATGGATCCTTCATGGCCACATCTGCAA
ATTGTGTATGAGTTCCTTCTGAGGTTTGTTGCATCACCTGAAACTGATGCAAAAGTTGCC
AAAAAATATATAGATCATTCCTTTGTACTCAGATTGCTTGATCTTTTTGACTCTGAGGAT
CCTAGGGAGAGGGAGTACTTGAAAATAATACTGCACCGTGTCTATGGGAAGTTTATGGTA
CACCGGCCTTACATCAGGAAGGCTATTAATAACATATTTTATCGTTTCGTTTTTGAGACT
GAAAAACATAATGGGATTGCGGAGCTTCTGGAAATTCTTGGCAGCATAATCAATGGGTTT
GCTTTGCCACTAAAAGAAGAACACAAGCTTTTTCTTGTACGGACATTGATTCCCTTGCAT
AAACCCAAATGCTTAGCCATGTACCATCAACAGTTAACTTATTGTATGACACAGTTTGTG
GAGAAAGACTGCAAGCTTGCTGATACAGTTATTAGGGGATTGTTAAAGTATTGGCCAGTA
ACAAATAGCTCAAAAGAGGTCATGTTCCTTGGTGAGTTGGAGGAAATCTTGGAAGCTACT
CAACCACCAGATTTCCAAAGGTGTATGGTGCCGTTGTTTCGTCGAATTGCTCAATGTTTG
ACTAGCTTTCATTTTCAGGTGGCGGAGAGGGCTTTATTCTTGTGGAATAACGATCATATT
GAGAATTTGATAAAGCAACACCGAAAAGTGATACTTCCTATCATCTTTCCTGCACTGGAG
AGAAATGCCAGAAACCATTGGAATCAGGCTGTTCACAGTTTGTCACTGAATATCCGGAAG
ATATTCTATGATCTTGATCCTGAGCTATTCAAGGAGTGCTTGCACAAGTTTCAAGAAGAT
GAATTGAAGGAAGATGAGATTAAATCAAAACGTGAAGCTACATGGAAACGATTAGAAGAA
CTTGCTGCCAAAAATACTACAAGTAATGAAGCTGTGCTTGTGCCATCCTCTGGGCATTCT
CGAACTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400030494
PEP Infomation

pacid=37445135 transcript=PGSC0003DMT400045008 locus=PGSC0003DMG400017455 ID=PGSC0003DMT400045008.v4.03 annot-version=v4.03
Sequence

MIKQIFGKKKQSKTAGSTSSKKSDGGSKKVGVSANTVISAPYSVSASTGDKFVRDGSLKL
NGNLVAASYDALPSFRDVPNAEKHNLFIRKLNMCCVLFDFTDPTKNLKEKEIKRQTLLEL
VEYVTSANVKFTEMVMQSVVKMVSTNLFRELMPQPRENKTLAFDVEEDEPAMDPSWPHLQ
IVYEFLLRFVASPETDAKVAKKYIDHSFVLRLLDLFDSEDPREREYLKIILHRVYGKFMV
HRPYIRKAINNIFYRFVFETEKHNGIAELLEILGSIINGFALPLKEEHKLFLVRTLIPLH
KPKCLAMYHQQLTYCMTQFVEKDCKLADTVIRGLLKYWPVTNSSKEVMFLGELEEILEAT
QPPDFQRCMVPLFRRIAQCLTSFHFQVAERALFLWNNDHIENLIKQHRKVILPIIFPALE
RNARNHWNQAVHSLSLNIRKIFYDLDPELFKECLHKFQEDELKEDEIKSKREATWKRLEE
LAAKNTTSNEAVLVPSSGHSRT*

Transcript Sequence

Transcript ID

PGSC0003DMT400045008
Transcript Infomation

pacid=37445135 locus=PGSC0003DMG400017455 ID=PGSC0003DMT400045008.v4.03 annot-version=v4.03
Sequence

ATGATCAAGCAGATATTTGGTAAGAAGAAGCAGTCGAAAACGGCTGGTTCAACTAGTTCA
AAGAAAAGTGATGGAGGAAGTAAAAAGGTTGGGGTATCAGCTAATACTGTTATTTCAGCT
CCTTATTCTGTTTCAGCTTCAACGGGGGATAAATTTGTTCGAGATGGGAGTTTAAAGCTT
AATGGGAATCTCGTTGCAGCTTCTTACGATGCATTGCCTAGTTTTAGGGATGTTCCCAAT
GCTGAGAAACACAACTTGTTTATTAGGAAGCTTAATATGTGTTGTGTTTTGTTTGATTTT
ACTGATCCTACAAAGAACCTTAAAGAAAAGGAAATCAAGCGACAGACGTTATTGGAGCTT
GTGGAGTATGTCACGTCTGCAAACGTGAAATTTACAGAAATGGTGATGCAATCAGTAGTA
AAGATGGTGTCGACTAATTTGTTTAGGGAACTCATGCCCCAGCCTCGAGAAAACAAGACG
TTGGCCTTTGATGTGGAAGAGGATGAACCTGCGATGGATCCTTCATGGCCACATCTGCAA
ATTGTGTATGAGTTCCTTCTGAGGTTTGTTGCATCACCTGAAACTGATGCAAAAGTTGCC
AAAAAATATATAGATCATTCCTTTGTACTCAGATTGCTTGATCTTTTTGACTCTGAGGAT
CCTAGGGAGAGGGAGTACTTGAAAATAATACTGCACCGTGTCTATGGGAAGTTTATGGTA
CACCGGCCTTACATCAGGAAGGCTATTAATAACATATTTTATCGTTTCGTTTTTGAGACT
GAAAAACATAATGGGATTGCGGAGCTTCTGGAAATTCTTGGCAGCATAATCAATGGGTTT
GCTTTGCCACTAAAAGAAGAACACAAGCTTTTTCTTGTACGGACATTGATTCCCTTGCAT
AAACCCAAATGCTTAGCCATGTACCATCAACAGTTAACTTATTGTATGACACAGTTTGTG
GAGAAAGACTGCAAGCTTGCTGATACAGTTATTAGGGGATTGTTAAAGTATTGGCCAGTA
ACAAATAGCTCAAAAGAGGTCATGTTCCTTGGTGAGTTGGAGGAAATCTTGGAAGCTACT
CAACCACCAGATTTCCAAAGGTGTATGGTGCCGTTGTTTCGTCGAATTGCTCAATGTTTG
ACTAGCTTTCATTTTCAGGTGGCGGAGAGGGCTTTATTCTTGTGGAATAACGATCATATT
GAGAATTTGATAAAGCAACACCGAAAAGTGATACTTCCTATCATCTTTCCTGCACTGGAG
AGAAATGCCAGAAACCATTGGAATCAGGCTGTTCACAGTTTGTCACTGAATATCCGGAAG
ATATTCTATGATCTTGATCCTGAGCTATTCAAGGAGTGCTTGCACAAGTTTCAAGAAGAT
GAATTGAAGGAAGATGAGATTAAATCAAAACGTGAAGCTACATGGAAACGATTAGAAGAA
CTTGCTGCCAAAAATACTACAAGTAATGAAGCTGTGCTTGTGCCATCCTCTGGGCATTCT
CGAACTTAA