Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400044989
CDS Infomation

pacid=37443926 polypeptide=PGSC0003DMP400030487 locus=PGSC0003DMG400017448 ID=PGSC0003DMT400044989.v4.03 annot-version=v4.03
Sequence

ATGGCTGCTGGAAGACATGGTGGTTACAGGGATAATGAATTTAGGGGGCGTGAGGCTGAG
TTTGAGGTTTCACGGCGGGAGCTTGGTTACTCCAAGGGGGATTACGAAAGAATTAGGTCT
GAGGATCGGGATTTTGATAGGGATCGAGTTCATGACAGGAGTGGTCGAGATAGGGGTAGG
TTGAGACAGAGGGATATAAAGGAAAGGGATATGGTAAATGGGAGTTTTAGGTCCATGTCA
AGCAGGAGTGATTCTGGTAGTAGTGATGGTGATGGTGGTGGAGCGAGGAGAAGTGGTGGG
CTTAGTGTCAGAGCTGTTGACCGAGAGCCTATAAAAGAAAGGGATATGATAAATGGCAGT
TATAGGTCCGGGTCAAGCAGGAGTGATTCTGGTAGTAGTGATGGTGATGCTGGTGGAATG
AGGAGAAGTGGGCTTAGTGTCAGGGCTGTTGACCGAGAGCCTGGGGAATTGTCTAGCGAG
AGTGGGTCTGATGGGGCTATTGAGTCAGACCAGAAGACCAAGAATGCCGCCAATGGGAAT
CAGTCTTCTGTACAGAGCAAGAAACGAAAATATTCTCCAATTATATGGGATAGGGAAGAT
AAGGAAGTGAATAGAATGTCAAAGAGTAGAAATTCACCAGTAGCTGCTAAGCTACCTCCT
CCGCCTCCATTGCCAAAGTCATCTGGCCAGTTGGCTAATTTCCCCCCTGAAAGGGTTGAG
CAGGTCTCTCTGTTGAACACTAATAATGTTCACAGTATGGAGCCATCCCCAAGTAATACA
AATACAGCACTTGGTTTACTTATGGATGCATCTCATGAATCCCCAGTTGACATATGTTCT
CCACCTGTTGATGAGGAGCAATTGCTCAGTCAGGAAGCCAGGAAAGTAGAAGATGAGGAA
TACGTGCCCGTGCCGACTATAAGATCATCTCGATGGGCAACTGATGCTGACTCTCCAGCT
GATGAAGGTGAGATTTCAGGTGATGATACGCCCCTATTGAAAAAGCGACGAGCAGTTTCC
CAGTCAGCTGAAATGGGTGGACGCAGGAAATCACTAACTCCTGAATATGAGGAGCTCAAG
AGAGAAAGCTCCGGAGGAAATAGAACGAGGTCTTCAGACTCTGATGAACATATTAGGTCT
TGCAGCAGAGAGAGTTACCAGGGCAATGAATTAGATAAGAATGACTCAATGGATGTGGAT
AAGGACCGCAATTATGATGGGACTAGTGTTAGCCAGTCAGATACAGAATCTGAAGATGAA
CATGATTCTCGTGGTACACCGGAGGCTGCGCTTCCTCCACAAAGGAGCGTAAACATGCTG
CAGGGGTGTAGAAGCGTCGATGAATTCGAGCGGCTTAACAGGATAGATGAAGGCACTTAT
GGGGTTGTTTACAGAGCTAAAGATAAGAAGACGGGAGAAATTGTTGCACTAAAGAAGGTT
AAGATGGAGAAGGAACGAGAAGGATTTCCCCTGACATCTCTCAGGGAGATTAACATTCTT
CTTTCTCTTCATCACCCCTCAATTGTAGATGTCAAAGAAGTAGTTGTAAGAAGCAGTCTT
GACAGTATTTTTATGGTGATGGAGTACATGGAACATGATCTGAAGGCATTAATGGAGACA
ATGAAAAAACCATTTACCCAAAGTGAAGTCAAATGTCTTATGCTCCAGCTTTTGCATGGT
GTCAAGTATCTTCATGATAATTGGGTCCTTCACCGAGATTTGAAGACTTCAAATTTGCTT
CTAAACAACCAAGGTGAGTTGAAGATTTGTGACTTTGGTTTAGCTCGTCAATATGGGAGC
CCCTTGAAACCATACACTCATTTGGTGGTTACTTTGTGGTACAGGGCGCCAGAACTTCTG
TTGGGAGCCAAGCAATATTCTACTGCAATTGACATGTGGTCACTGGGTTGTATCATGGCC
GAGATGCTATGCAAAGAACCACTCTTCAATGGGAAAACAGAAGTTGATCAAATTGACAAG
ATATTCAGAATTCTTGGCACCCCTAATGAGACGATTTGGCCAGGGTTTTCCAAGCTTCCT
GGGGTGAAGGTCAACTTTGTAAAGCATCAGCTTCCAGCTTTGGGTGATTCTGGTTTGGCT
TTCTGGCCTCCTCTGATGACAATCTATGGTGGAGAAGTATTTTCATGTTTCTACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400030487
PEP Infomation

pacid=37443926 transcript=PGSC0003DMT400044989 locus=PGSC0003DMG400017448 ID=PGSC0003DMT400044989.v4.03 annot-version=v4.03
Sequence

MAAGRHGGYRDNEFRGREAEFEVSRRELGYSKGDYERIRSEDRDFDRDRVHDRSGRDRGR
LRQRDIKERDMVNGSFRSMSSRSDSGSSDGDGGGARRSGGLSVRAVDREPIKERDMINGS
YRSGSSRSDSGSSDGDAGGMRRSGLSVRAVDREPGELSSESGSDGAIESDQKTKNAANGN
QSSVQSKKRKYSPIIWDREDKEVNRMSKSRNSPVAAKLPPPPPLPKSSGQLANFPPERVE
QVSLLNTNNVHSMEPSPSNTNTALGLLMDASHESPVDICSPPVDEEQLLSQEARKVEDEE
YVPVPTIRSSRWATDADSPADEGEISGDDTPLLKKRRAVSQSAEMGGRRKSLTPEYEELK
RESSGGNRTRSSDSDEHIRSCSRESYQGNELDKNDSMDVDKDRNYDGTSVSQSDTESEDE
HDSRGTPEAALPPQRSVNMLQGCRSVDEFERLNRIDEGTYGVVYRAKDKKTGEIVALKKV
KMEKEREGFPLTSLREINILLSLHHPSIVDVKEVVVRSSLDSIFMVMEYMEHDLKALMET
MKKPFTQSEVKCLMLQLLHGVKYLHDNWVLHRDLKTSNLLLNNQGELKICDFGLARQYGS
PLKPYTHLVVTLWYRAPELLLGAKQYSTAIDMWSLGCIMAEMLCKEPLFNGKTEVDQIDK
IFRILGTPNETIWPGFSKLPGVKVNFVKHQLPALGDSGLAFWPPLMTIYGGEVFSCFY*

Transcript Sequence

Transcript ID

PGSC0003DMT400044989
Transcript Infomation

pacid=37443926 locus=PGSC0003DMG400017448 ID=PGSC0003DMT400044989.v4.03 annot-version=v4.03
Sequence

ATGGCTGCTGGAAGACATGGTGGTTACAGGGATAATGAATTTAGGGGGCGTGAGGCTGAG
TTTGAGGTTTCACGGCGGGAGCTTGGTTACTCCAAGGGGGATTACGAAAGAATTAGGTCT
GAGGATCGGGATTTTGATAGGGATCGAGTTCATGACAGGAGTGGTCGAGATAGGGGTAGG
TTGAGACAGAGGGATATAAAGGAAAGGGATATGGTAAATGGGAGTTTTAGGTCCATGTCA
AGCAGGAGTGATTCTGGTAGTAGTGATGGTGATGGTGGTGGAGCGAGGAGAAGTGGTGGG
CTTAGTGTCAGAGCTGTTGACCGAGAGCCTATAAAAGAAAGGGATATGATAAATGGCAGT
TATAGGTCCGGGTCAAGCAGGAGTGATTCTGGTAGTAGTGATGGTGATGCTGGTGGAATG
AGGAGAAGTGGGCTTAGTGTCAGGGCTGTTGACCGAGAGCCTGGGGAATTGTCTAGCGAG
AGTGGGTCTGATGGGGCTATTGAGTCAGACCAGAAGACCAAGAATGCCGCCAATGGGAAT
CAGTCTTCTGTACAGAGCAAGAAACGAAAATATTCTCCAATTATATGGGATAGGGAAGAT
AAGGAAGTGAATAGAATGTCAAAGAGTAGAAATTCACCAGTAGCTGCTAAGCTACCTCCT
CCGCCTCCATTGCCAAAGTCATCTGGCCAGTTGGCTAATTTCCCCCCTGAAAGGGTTGAG
CAGGTCTCTCTGTTGAACACTAATAATGTTCACAGTATGGAGCCATCCCCAAGTAATACA
AATACAGCACTTGGTTTACTTATGGATGCATCTCATGAATCCCCAGTTGACATATGTTCT
CCACCTGTTGATGAGGAGCAATTGCTCAGTCAGGAAGCCAGGAAAGTAGAAGATGAGGAA
TACGTGCCCGTGCCGACTATAAGATCATCTCGATGGGCAACTGATGCTGACTCTCCAGCT
GATGAAGGTGAGATTTCAGGTGATGATACGCCCCTATTGAAAAAGCGACGAGCAGTTTCC
CAGTCAGCTGAAATGGGTGGACGCAGGAAATCACTAACTCCTGAATATGAGGAGCTCAAG
AGAGAAAGCTCCGGAGGAAATAGAACGAGGTCTTCAGACTCTGATGAACATATTAGGTCT
TGCAGCAGAGAGAGTTACCAGGGCAATGAATTAGATAAGAATGACTCAATGGATGTGGAT
AAGGACCGCAATTATGATGGGACTAGTGTTAGCCAGTCAGATACAGAATCTGAAGATGAA
CATGATTCTCGTGGTACACCGGAGGCTGCGCTTCCTCCACAAAGGAGCGTAAACATGCTG
CAGGGGTGTAGAAGCGTCGATGAATTCGAGCGGCTTAACAGGATAGATGAAGGCACTTAT
GGGGTTGTTTACAGAGCTAAAGATAAGAAGACGGGAGAAATTGTTGCACTAAAGAAGGTT
AAGATGGAGAAGGAACGAGAAGGATTTCCCCTGACATCTCTCAGGGAGATTAACATTCTT
CTTTCTCTTCATCACCCCTCAATTGTAGATGTCAAAGAAGTAGTTGTAAGAAGCAGTCTT
GACAGTATTTTTATGGTGATGGAGTACATGGAACATGATCTGAAGGCATTAATGGAGACA
ATGAAAAAACCATTTACCCAAAGTGAAGTCAAATGTCTTATGCTCCAGCTTTTGCATGGT
GTCAAGTATCTTCATGATAATTGGGTCCTTCACCGAGATTTGAAGACTTCAAATTTGCTT
CTAAACAACCAAGGTGAGTTGAAGATTTGTGACTTTGGTTTAGCTCGTCAATATGGGAGC
CCCTTGAAACCATACACTCATTTGGTGGTTACTTTGTGGTACAGGGCGCCAGAACTTCTG
TTGGGAGCCAAGCAATATTCTACTGCAATTGACATGTGGTCACTGGGTTGTATCATGGCC
GAGATGCTATGCAAAGAACCACTCTTCAATGGGAAAACAGAAGTTGATCAAATTGACAAG
ATATTCAGAATTCTTGGCACCCCTAATGAGACGATTTGGCCAGGGTTTTCCAAGCTTCCT
GGGGTGAAGGTCAACTTTGTAAAGCATCAGCTTCCAGCTTTGGGTGATTCTGGTTTGGCT
TTCTGGCCTCCTCTGATGACAATCTATGGTGGAGAAGTATTTTCATGTTTCTACTAA