Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400044958
CDS Infomation

pacid=37445193 polypeptide=PGSC0003DMP400030470 locus=PGSC0003DMG400017439 ID=PGSC0003DMT400044958.v4.03 annot-version=v4.03
Sequence

ATGGAAGAGGAAATCAAAGCTGAATTCCTGAAAAATGGCTTCAGTCTCGATGATGAAGCA
GAAATTCTCAACAAATGTCTTACTTTCTGTATTCAATACAGCCTAAGCCCCTCCGATCTT
GTTTCTAGCTGGGACGTCTACTCTCTCAATAGGGGTCTGCAATTGACGGTGCAGAGTTCA
CATATGGGTGCGTTTCTACAACAATTACAGAATGAGCGGAGAGAGGACATTGTTAAAAAG
GAACCTGGTTTACATTTCTACTCCAGTGATATTTCTATGATGTTGAATGATGAATACGAG
AACACAAAGGAAATCATTCTTGGTACTCCAACAGATAAACGGAAGACATCACAGTCAGAA
ACAATTGTTTCAGCACGAAAAACTAATGGGAGCATTTCCACCTCCAGAAAGCATTTAGAA
ACAATTACACCCTTTGGACAAAGAAAGAGCAAGTTTGTGGTGCAGTTTACTCTCAATGAG
AACGCTAATGGAGAAAGTATGAAAATAGAAAACGATGAGGAGAACCTCAATGATGACATT
ATAAAGAGAGTCCAACCGATCAAAAGATGTTCTTTGCAGATCATTAGCTCTCAACCTGAG
CCAGGGTGCAGGTTCATGTATGACAGGACGGAAAATAAGTTTAATTTTCTTGAAAGCCGA
ATAAAGGATCACACAACAGCACTTGTAGCCTCTGGACTGCATGAGGAACCAACTGATCCT
ACAGTTGCTTCACAGAGATCCGTATTTGCTGTTGGTATGATTTGTTGTGAGGAAGAAGGG
CGTTTGAAGGAAAAGCCTATTTTACTGCAAAGCAGCGTTGAGCATTCTGGAGGTCAACGT
GTGCGCCTTGACTTGCAAAACTTGGACCACTTTTCTGTTTTCCCTGGCCAGGTGGTTGGT
GTTGAAGGGCATAACCCAAGTGGCCATTGTCTCATTGCATCAAAGATTGTTGACCGCATT
CCTTTGTCAGCTTCTTCCACGGAAAATCTCCCACCTACAAAGAAACAAGCAATGGATCAA
TATCTTCAGTCAACCAGTGCCGTGGTTGCAATGCCAGAGCTATCATTGATTATAGCTGCG
GGTCCTTTTACAACAGTTGATAACTTATTCTTTGAGCCTCTTGCTGAGCTTCTGTCGTAC
GCGCGGCGCAAGCAGCCTCAGTTGATCATACTGCTAGGACCATTTATAGATTCAGATCAT
CCTGAGATCAAGAAAGGAACTGTAGATAGGACATTTGATGAAATCTTTCAGGATGAAATT
CTTGCAAGGTTAAGAGATTATGTAGAATATATGGGTTCTGCTGCTCGTGTGATTCTTGTT
CCATCTGTACGAGATGCTAGCCATGACTTCGTTTACCCTCAGCCAGCCTTTGACATTCAG
TCGCCCGATCTTGAACATCAGATAAATAGCATTACAAATCCTGGGATATTCTGTGCAAAT
GAGGTGAAAGTGGCTTGCTGTACGGTTGATGTTCTTAAACAGCTCAGTGCAGAGGAAATT
TCACGAAATCCACAAGGGGGATCCAAGCAACGGATGACAACTCTTGCGAACCATATCTTA
AACCAGCGCAGCTTCTATCCTCTATATCCTCCAGCTGAAGGCGTACCTATTGATTTCTCT
CTGGCTCCAGAAGCTCTTCAGATGTCAACAGCCCCAGATATACTTATTTTACCCTCAGAT
TTGGCTCACTTTGTTAGGGTGATCTCCCTTGGGGAAAGAAGTGAAGGAGAAGAAGTAAAG
TGCATATGTGTCAATCCTGGACGACTTTCAAGGGGAGAAGGAGGAGGTTTCTTCATGGAG
CTTAACTATCATGGAAGCTGTGATTCATCGAGTGCTTCAGTCCTTCGTATATAA

Peptide Sequence

PEP ID

PGSC0003DMP400030470
PEP Infomation

pacid=37445193 transcript=PGSC0003DMT400044958 locus=PGSC0003DMG400017439 ID=PGSC0003DMT400044958.v4.03 annot-version=v4.03
Sequence

MEEEIKAEFLKNGFSLDDEAEILNKCLTFCIQYSLSPSDLVSSWDVYSLNRGLQLTVQSS
HMGAFLQQLQNERREDIVKKEPGLHFYSSDISMMLNDEYENTKEIILGTPTDKRKTSQSE
TIVSARKTNGSISTSRKHLETITPFGQRKSKFVVQFTLNENANGESMKIENDEENLNDDI
IKRVQPIKRCSLQIISSQPEPGCRFMYDRTENKFNFLESRIKDHTTALVASGLHEEPTDP
TVASQRSVFAVGMICCEEEGRLKEKPILLQSSVEHSGGQRVRLDLQNLDHFSVFPGQVVG
VEGHNPSGHCLIASKIVDRIPLSASSTENLPPTKKQAMDQYLQSTSAVVAMPELSLIIAA
GPFTTVDNLFFEPLAELLSYARRKQPQLIILLGPFIDSDHPEIKKGTVDRTFDEIFQDEI
LARLRDYVEYMGSAARVILVPSVRDASHDFVYPQPAFDIQSPDLEHQINSITNPGIFCAN
EVKVACCTVDVLKQLSAEEISRNPQGGSKQRMTTLANHILNQRSFYPLYPPAEGVPIDFS
LAPEALQMSTAPDILILPSDLAHFVRVISLGERSEGEEVKCICVNPGRLSRGEGGGFFME
LNYHGSCDSSSASVLRI*

Transcript Sequence

Transcript ID

PGSC0003DMT400044958
Transcript Infomation

pacid=37445193 locus=PGSC0003DMG400017439 ID=PGSC0003DMT400044958.v4.03 annot-version=v4.03
Sequence

ATGGAAGAGGAAATCAAAGCTGAATTCCTGAAAAATGGCTTCAGTCTCGATGATGAAGCA
GAAATTCTCAACAAATGTCTTACTTTCTGTATTCAATACAGCCTAAGCCCCTCCGATCTT
GTTTCTAGCTGGGACGTCTACTCTCTCAATAGGGGTCTGCAATTGACGGTGCAGAGTTCA
CATATGGGTGCGTTTCTACAACAATTACAGAATGAGCGGAGAGAGGACATTGTTAAAAAG
GAACCTGGTTTACATTTCTACTCCAGTGATATTTCTATGATGTTGAATGATGAATACGAG
AACACAAAGGAAATCATTCTTGGTACTCCAACAGATAAACGGAAGACATCACAGTCAGAA
ACAATTGTTTCAGCACGAAAAACTAATGGGAGCATTTCCACCTCCAGAAAGCATTTAGAA
ACAATTACACCCTTTGGACAAAGAAAGAGCAAGTTTGTGGTGCAGTTTACTCTCAATGAG
AACGCTAATGGAGAAAGTATGAAAATAGAAAACGATGAGGAGAACCTCAATGATGACATT
ATAAAGAGAGTCCAACCGATCAAAAGATGTTCTTTGCAGATCATTAGCTCTCAACCTGAG
CCAGGGTGCAGGTTCATGTATGACAGGACGGAAAATAAGTTTAATTTTCTTGAAAGCCGA
ATAAAGGATCACACAACAGCACTTGTAGCCTCTGGACTGCATGAGGAACCAACTGATCCT
ACAGTTGCTTCACAGAGATCCGTATTTGCTGTTGGTATGATTTGTTGTGAGGAAGAAGGG
CGTTTGAAGGAAAAGCCTATTTTACTGCAAAGCAGCGTTGAGCATTCTGGAGGTCAACGT
GTGCGCCTTGACTTGCAAAACTTGGACCACTTTTCTGTTTTCCCTGGCCAGGTGGTTGGT
GTTGAAGGGCATAACCCAAGTGGCCATTGTCTCATTGCATCAAAGATTGTTGACCGCATT
CCTTTGTCAGCTTCTTCCACGGAAAATCTCCCACCTACAAAGAAACAAGCAATGGATCAA
TATCTTCAGTCAACCAGTGCCGTGGTTGCAATGCCAGAGCTATCATTGATTATAGCTGCG
GGTCCTTTTACAACAGTTGATAACTTATTCTTTGAGCCTCTTGCTGAGCTTCTGTCGTAC
GCGCGGCGCAAGCAGCCTCAGTTGATCATACTGCTAGGACCATTTATAGATTCAGATCAT
CCTGAGATCAAGAAAGGAACTGTAGATAGGACATTTGATGAAATCTTTCAGGATGAAATT
CTTGCAAGGTTAAGAGATTATGTAGAATATATGGGTTCTGCTGCTCGTGTGATTCTTGTT
CCATCTGTACGAGATGCTAGCCATGACTTCGTTTACCCTCAGCCAGCCTTTGACATTCAG
TCGCCCGATCTTGAACATCAGATAAATAGCATTACAAATCCTGGGATATTCTGTGCAAAT
GAGGTGAAAGTGGCTTGCTGTACGGTTGATGTTCTTAAACAGCTCAGTGCAGAGGAAATT
TCACGAAATCCACAAGGGGGATCCAAGCAACGGATGACAACTCTTGCGAACCATATCTTA
AACCAGCGCAGCTTCTATCCTCTATATCCTCCAGCTGAAGGCGTACCTATTGATTTCTCT
CTGGCTCCAGAAGCTCTTCAGATGTCAACAGCCCCAGATATACTTATTTTACCCTCAGAT
TTGGCTCACTTTGTTAGGGTGATCTCCCTTGGGGAAAGAAGTGAAGGAGAAGAAGTAAAG
TGCATATGTGTCAATCCTGGACGACTTTCAAGGGGAGAAGGAGGAGGTTTCTTCATGGAG
CTTAACTATCATGGAAGCTGTGATTCATCGAGTGCTTCAGTCCTTCGTATATAA