Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400044952
CDS Infomation

pacid=37442385 polypeptide=PGSC0003DMP400030467 locus=PGSC0003DMG400017437 ID=PGSC0003DMT400044952.v4.03 annot-version=v4.03
Sequence

ATGCCTCCAAATTATTTTCCTTTGAGATGGGAAAGCACAGGGGATCAATGGTGGTTTGCT
TCTCCTATTGATTGGGCAGCAGCAAATGGTCATTATGATCTAGTGAGGGAGTTGCTTCAC
TTGGACACTAATTTACTCATAAAGCTCACATCTTTACGTAGAATTAGAAGGCTTGAGAGT
GTTTGGGATGATGAAGAACAGTTTGATGATGTTGCAAAATGTAGGTCTGAAGTTGCTAAA
AAACTTCTCCTTGAAGGTGAAACAAAGAAAGGACATAATTCTTTGATTAGAGCTGGATAT
GGTGGTTGGCTTCTTTATACTGCTGCTTCAGCTGGGGATGTGGAGTTTGTTAAACAATTA
TTGGAAAGAGATCCATTTTTGGTGTTTGGTGAAGGTGAGTATGGTGTTACTGATATGTTT
TATGCAGCTGCTAGGAGTAAAAATTCTCAAGTTTTTAGGCTGTTGCTTGAGAGTAGTAAA
GGGGAATCAGCAGAAGAGGATTCTTCCACTTTTCAGTTGGAATTGATGAATAGGGCAGTT
CATTCTGCTGCTAGAGGGGGAAATGTGGAGATGTTGAGAGAGATTCTTGGAAATTGCTCT
GATGTTTTGGTTTATAGAGATGCTCAAGGATCTACTCTCTTGCATTCTGCTTCTGGTAGA
GGGCAGGTTGAGGTTGTTAAGAGCTTACTGGAAAGGTATGACCTTATCAACTCCAGAGAC
AACCAAGGAAACACTGCACTGCATGTAGCTGCTTATAGGGGTTACTTAGCAGTGGTGAAA
GTTCTTATATCTGTCTCTCCTTCATCTGCCACATTGAGAAACAATTACGGAGACACGTTC
CTTCACATGGCTGTAGCTGGCTTTCGGACCCCAAGTTTCCGCAGGCTGGATCGACAAATG
GAGTTAATGAAGCAGTTGGTACGCGGGAAAATTATAGAGATTGAAGACATTATTAACATC
AGGAACAATGATGGTCGAACTGCTCTTCACTTGGCTGTAATTGAGAACATTCAGACTGAT
GTTGTGGAACTCCTCATGACTGCATTTTCAATAAATTTAAATATCCGTGATGCTGACGGA
AATACTCCACTGGATCTCCTCAAGCTACACCCGCAATCTGCATCTTCTGAGATATTGATT
AAGCGCCTCATTTCAGCTGGAGGAATTTCGAATTGCCAAGACCATATGACAAGAACTGTC
CTAGCTTCCCACCTGAAGATGCAGGGTATTGGAGGTAGTCCTGGTGCCTCTTTTAGGATC
CCCGACGCTGAAATATTTCTGTATGCTGGCATTGATAATGCTTCTGATGCCAATAGTGAT
TGTGCCAGCACAGAAATCGCTTCGTGCTGGGGTGAACCGAGCCCTTGCCATTCTGCTGCA
GGGTCGAACTCATCAAACAAGCTGAGCTCAGTTAACAGTGCTGCTAGACGCTTAAAGTTT
CTTCTACGATGGAAAAGGAAGAAAGAACAAAAAGAAGAAACCAGAGGCTTAGAAGATAAA
ATGTCTGTAGAATCTTACAGACTGTATTCTGGCTTTGGACACCAGCCAATTCCTCTTCGG
CAAAGATTCTCGAGGATGTCATCACTTCCAAACAACAAAAGAGTGCTCCCTGTCCCAAAC
AGTCTTCCAAGTCCATCCACCAAAAAGAAATTTGCAGCCGGGCTGATACACGGTGTTATC
CAAATGACACCACAGTCATCTTATGGATCACCATCGAGTGCTTATTCTGAATCTTCCTGG
TCATCTCCAGTGGTTGTCAACAAAGAGAAGAGACTGGATTTTGGCAATGCAAGCGGAGGA
TCCTCTAGCTTAAAAATGTCAAACAGTACGGAAAAGTCGAAACTATCACGTAAACATGGC
TCCTTCAACATGAAGTTAATGAATCAGTACTTCTGTTTCGGAGCTCAAGGCCTCGCTGTG
GAAAGTTCTGTTAATTGTGCACAACAAGATCAGCATCACAGGCATCCAGTGGTAGCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400030467
PEP Infomation

pacid=37442385 transcript=PGSC0003DMT400044952 locus=PGSC0003DMG400017437 ID=PGSC0003DMT400044952.v4.03 annot-version=v4.03
Sequence

MPPNYFPLRWESTGDQWWFASPIDWAAANGHYDLVRELLHLDTNLLIKLTSLRRIRRLES
VWDDEEQFDDVAKCRSEVAKKLLLEGETKKGHNSLIRAGYGGWLLYTAASAGDVEFVKQL
LERDPFLVFGEGEYGVTDMFYAAARSKNSQVFRLLLESSKGESAEEDSSTFQLELMNRAV
HSAARGGNVEMLREILGNCSDVLVYRDAQGSTLLHSASGRGQVEVVKSLLERYDLINSRD
NQGNTALHVAAYRGYLAVVKVLISVSPSSATLRNNYGDTFLHMAVAGFRTPSFRRLDRQM
ELMKQLVRGKIIEIEDIINIRNNDGRTALHLAVIENIQTDVVELLMTAFSINLNIRDADG
NTPLDLLKLHPQSASSEILIKRLISAGGISNCQDHMTRTVLASHLKMQGIGGSPGASFRI
PDAEIFLYAGIDNASDANSDCASTEIASCWGEPSPCHSAAGSNSSNKLSSVNSAARRLKF
LLRWKRKKEQKEETRGLEDKMSVESYRLYSGFGHQPIPLRQRFSRMSSLPNNKRVLPVPN
SLPSPSTKKKFAAGLIHGVIQMTPQSSYGSPSSAYSESSWSSPVVVNKEKRLDFGNASGG
SSSLKMSNSTEKSKLSRKHGSFNMKLMNQYFCFGAQGLAVESSVNCAQQDQHHRHPVVA*

Transcript Sequence

Transcript ID

PGSC0003DMT400044952
Transcript Infomation

pacid=37442385 locus=PGSC0003DMG400017437 ID=PGSC0003DMT400044952.v4.03 annot-version=v4.03
Sequence

ATGCCTCCAAATTATTTTCCTTTGAGATGGGAAAGCACAGGGGATCAATGGTGGTTTGCT
TCTCCTATTGATTGGGCAGCAGCAAATGGTCATTATGATCTAGTGAGGGAGTTGCTTCAC
TTGGACACTAATTTACTCATAAAGCTCACATCTTTACGTAGAATTAGAAGGCTTGAGAGT
GTTTGGGATGATGAAGAACAGTTTGATGATGTTGCAAAATGTAGGTCTGAAGTTGCTAAA
AAACTTCTCCTTGAAGGTGAAACAAAGAAAGGACATAATTCTTTGATTAGAGCTGGATAT
GGTGGTTGGCTTCTTTATACTGCTGCTTCAGCTGGGGATGTGGAGTTTGTTAAACAATTA
TTGGAAAGAGATCCATTTTTGGTGTTTGGTGAAGGTGAGTATGGTGTTACTGATATGTTT
TATGCAGCTGCTAGGAGTAAAAATTCTCAAGTTTTTAGGCTGTTGCTTGAGAGTAGTAAA
GGGGAATCAGCAGAAGAGGATTCTTCCACTTTTCAGTTGGAATTGATGAATAGGGCAGTT
CATTCTGCTGCTAGAGGGGGAAATGTGGAGATGTTGAGAGAGATTCTTGGAAATTGCTCT
GATGTTTTGGTTTATAGAGATGCTCAAGGATCTACTCTCTTGCATTCTGCTTCTGGTAGA
GGGCAGGTTGAGGTTGTTAAGAGCTTACTGGAAAGGTATGACCTTATCAACTCCAGAGAC
AACCAAGGAAACACTGCACTGCATGTAGCTGCTTATAGGGGTTACTTAGCAGTGGTGAAA
GTTCTTATATCTGTCTCTCCTTCATCTGCCACATTGAGAAACAATTACGGAGACACGTTC
CTTCACATGGCTGTAGCTGGCTTTCGGACCCCAAGTTTCCGCAGGCTGGATCGACAAATG
GAGTTAATGAAGCAGTTGGTACGCGGGAAAATTATAGAGATTGAAGACATTATTAACATC
AGGAACAATGATGGTCGAACTGCTCTTCACTTGGCTGTAATTGAGAACATTCAGACTGAT
GTTGTGGAACTCCTCATGACTGCATTTTCAATAAATTTAAATATCCGTGATGCTGACGGA
AATACTCCACTGGATCTCCTCAAGCTACACCCGCAATCTGCATCTTCTGAGATATTGATT
AAGCGCCTCATTTCAGCTGGAGGAATTTCGAATTGCCAAGACCATATGACAAGAACTGTC
CTAGCTTCCCACCTGAAGATGCAGGGTATTGGAGGTAGTCCTGGTGCCTCTTTTAGGATC
CCCGACGCTGAAATATTTCTGTATGCTGGCATTGATAATGCTTCTGATGCCAATAGTGAT
TGTGCCAGCACAGAAATCGCTTCGTGCTGGGGTGAACCGAGCCCTTGCCATTCTGCTGCA
GGGTCGAACTCATCAAACAAGCTGAGCTCAGTTAACAGTGCTGCTAGACGCTTAAAGTTT
CTTCTACGATGGAAAAGGAAGAAAGAACAAAAAGAAGAAACCAGAGGCTTAGAAGATAAA
ATGTCTGTAGAATCTTACAGACTGTATTCTGGCTTTGGACACCAGCCAATTCCTCTTCGG
CAAAGATTCTCGAGGATGTCATCACTTCCAAACAACAAAAGAGTGCTCCCTGTCCCAAAC
AGTCTTCCAAGTCCATCCACCAAAAAGAAATTTGCAGCCGGGCTGATACACGGTGTTATC
CAAATGACACCACAGTCATCTTATGGATCACCATCGAGTGCTTATTCTGAATCTTCCTGG
TCATCTCCAGTGGTTGTCAACAAAGAGAAGAGACTGGATTTTGGCAATGCAAGCGGAGGA
TCCTCTAGCTTAAAAATGTCAAACAGTACGGAAAAGTCGAAACTATCACGTAAACATGGC
TCCTTCAACATGAAGTTAATGAATCAGTACTTCTGTTTCGGAGCTCAAGGCCTCGCTGTG
GAAAGTTCTGTTAATTGTGCACAACAAGATCAGCATCACAGGCATCCAGTGGTAGCATGA