Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400044949
CDS Infomation

pacid=37444059 polypeptide=PGSC0003DMP400030465 locus=PGSC0003DMG400017435 ID=PGSC0003DMT400044949.v4.03 annot-version=v4.03
Sequence

ATGAACTTCAATATTAGAAAACTAACCTCTACACACTTTTCGGTTTTTCACCCATTTCGG
GTTTGGAACAGTTCCAATGTAGCTCGTACAAGTTGCTTTAGCTACTTTTCCACCTTGTCT
AGTGATTTTTGTCTTGAAAGTACCCAGTTTGTTGGCGATAGAATTCCTGGTGAGCAGCAG
AAATGTGTGAACTTGGGAAGTGATGTTGATGTTAATATTGTACTTGCTAGAATAAGTCAT
GGAACTAGTGAAGATGAGGTTCTCCAATCATTACTTTCTGACCCGGCTTGTGATTCCATA
CAGATCAGTGACAACTTTGTTAATAGGGTTCTTTATCGCTTCAAAGATGATTGGAAGTCT
GCGCTTGGTGCTTTTAGATGGGCACAATCACGTCCCAACTACAAGCCCTCACCAGAATTG
TACGATAAGTTGGTGGATATACTCGGGAAAATGAAGAAAATGGAAAAGATGCGTTCATTG
TTAGACGAAATGCATGCAGACCACCTTATTTCTCTTAATACAATAGCAAAAGTTATGAGA
AGGTTTGCAGGTGCACGAGAGTGGAAAGAAGCAGTGAGGATATTTGATGAGTTGGGAAAA
TTCGGTTTGGAGAAGAATACAGAGTCAATGAATTTGTTACTTGACACTCTGTGCAAAGAA
AATAGAGTCCAACAGGCGCGTGAAATCTTCTACGAGCTCAAGTTGCATATCCCACCAAAT
GCGAACACGTTTAACATTTTTGTTCATGGTTGGTGCAAAGTTAATCGGGTAGAAGAAGCG
TACTGGACAATTCAGGAGATGAAAGGCAGCGGTTGTTGTCCTTGCGTCATCAGCTACTCA
ACCATCATCAAGTCTTACTGCCAGCAATTTAACTTCCAGAAGGTCTATGAGCTACTTAAT
GAAATGCAAGGAGAAGGATGTGTACCAAATGTTGTTACTTTCACCACCATCATGTGTTTC
TTGACAAAATCAGGGGCATTTGAGGAAGCCCTTAAGATTGCTGAGAGGATGAAATCAGTT
GGCTGTAAACCTGATACACTTTTTTACAATGCTCTGATTCATACATTAGGCATGGCACAC
CGATTACAAGAAGCTACTCGTGTTTTGAAGGTTGAAATGCCCAGAAATGGTGTTCAACCC
AATACATCGACTTACAATACTATCATTGCCATGTTTTGCCATCATTTGCAAGAGGAAAGA
GCGGAAGAATTTTTAAGGGATCTGGAAAGTTCACCATTTTGTAAACCTGATGTACAGACA
TACTTTCCGCTGCTCAAGTTGTCCTTTAAAGTTGGAAAGGCGGATGAATTCCTGATAAAA
TTGTTGAATGACATTGTCAATAAGCATCATCTAAGTCTTGACCTATCAAGTTATGCACTT
CTTATCCATGGTTTATGCAGAGCAAATAAATGTGAATGGGCGTATCTTATTTTTGAGGAT
ATGGTCCGCCAAGAGATTACTCCTCGATACAAGACATGCAGTGTTCTGCTGCAGGAAATT
AAACAAAAGAATATGTATGAGGCTGCCGATAAGATTGAATTGTTCATGAAGAAAATGAAG
GCCGGCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400030465
PEP Infomation

pacid=37444059 transcript=PGSC0003DMT400044949 locus=PGSC0003DMG400017435 ID=PGSC0003DMT400044949.v4.03 annot-version=v4.03
Sequence

MNFNIRKLTSTHFSVFHPFRVWNSSNVARTSCFSYFSTLSSDFCLESTQFVGDRIPGEQQ
KCVNLGSDVDVNIVLARISHGTSEDEVLQSLLSDPACDSIQISDNFVNRVLYRFKDDWKS
ALGAFRWAQSRPNYKPSPELYDKLVDILGKMKKMEKMRSLLDEMHADHLISLNTIAKVMR
RFAGAREWKEAVRIFDELGKFGLEKNTESMNLLLDTLCKENRVQQAREIFYELKLHIPPN
ANTFNIFVHGWCKVNRVEEAYWTIQEMKGSGCCPCVISYSTIIKSYCQQFNFQKVYELLN
EMQGEGCVPNVVTFTTIMCFLTKSGAFEEALKIAERMKSVGCKPDTLFYNALIHTLGMAH
RLQEATRVLKVEMPRNGVQPNTSTYNTIIAMFCHHLQEERAEEFLRDLESSPFCKPDVQT
YFPLLKLSFKVGKADEFLIKLLNDIVNKHHLSLDLSSYALLIHGLCRANKCEWAYLIFED
MVRQEITPRYKTCSVLLQEIKQKNMYEAADKIELFMKKMKAG*

Transcript Sequence

Transcript ID

PGSC0003DMT400044949
Transcript Infomation

pacid=37444059 locus=PGSC0003DMG400017435 ID=PGSC0003DMT400044949.v4.03 annot-version=v4.03
Sequence

ATGAACTTCAATATTAGAAAACTAACCTCTACACACTTTTCGGTTTTTCACCCATTTCGG
GTTTGGAACAGTTCCAATGTAGCTCGTACAAGTTGCTTTAGCTACTTTTCCACCTTGTCT
AGTGATTTTTGTCTTGAAAGTACCCAGTTTGTTGGCGATAGAATTCCTGGTGAGCAGCAG
AAATGTGTGAACTTGGGAAGTGATGTTGATGTTAATATTGTACTTGCTAGAATAAGTCAT
GGAACTAGTGAAGATGAGGTTCTCCAATCATTACTTTCTGACCCGGCTTGTGATTCCATA
CAGATCAGTGACAACTTTGTTAATAGGGTTCTTTATCGCTTCAAAGATGATTGGAAGTCT
GCGCTTGGTGCTTTTAGATGGGCACAATCACGTCCCAACTACAAGCCCTCACCAGAATTG
TACGATAAGTTGGTGGATATACTCGGGAAAATGAAGAAAATGGAAAAGATGCGTTCATTG
TTAGACGAAATGCATGCAGACCACCTTATTTCTCTTAATACAATAGCAAAAGTTATGAGA
AGGTTTGCAGGTGCACGAGAGTGGAAAGAAGCAGTGAGGATATTTGATGAGTTGGGAAAA
TTCGGTTTGGAGAAGAATACAGAGTCAATGAATTTGTTACTTGACACTCTGTGCAAAGAA
AATAGAGTCCAACAGGCGCGTGAAATCTTCTACGAGCTCAAGTTGCATATCCCACCAAAT
GCGAACACGTTTAACATTTTTGTTCATGGTTGGTGCAAAGTTAATCGGGTAGAAGAAGCG
TACTGGACAATTCAGGAGATGAAAGGCAGCGGTTGTTGTCCTTGCGTCATCAGCTACTCA
ACCATCATCAAGTCTTACTGCCAGCAATTTAACTTCCAGAAGGTCTATGAGCTACTTAAT
GAAATGCAAGGAGAAGGATGTGTACCAAATGTTGTTACTTTCACCACCATCATGTGTTTC
TTGACAAAATCAGGGGCATTTGAGGAAGCCCTTAAGATTGCTGAGAGGATGAAATCAGTT
GGCTGTAAACCTGATACACTTTTTTACAATGCTCTGATTCATACATTAGGCATGGCACAC
CGATTACAAGAAGCTACTCGTGTTTTGAAGGTTGAAATGCCCAGAAATGGTGTTCAACCC
AATACATCGACTTACAATACTATCATTGCCATGTTTTGCCATCATTTGCAAGAGGAAAGA
GCGGAAGAATTTTTAAGGGATCTGGAAAGTTCACCATTTTGTAAACCTGATGTACAGACA
TACTTTCCGCTGCTCAAGTTGTCCTTTAAAGTTGGAAAGGCGGATGAATTCCTGATAAAA
TTGTTGAATGACATTGTCAATAAGCATCATCTAAGTCTTGACCTATCAAGTTATGCACTT
CTTATCCATGGTTTATGCAGAGCAAATAAATGTGAATGGGCGTATCTTATTTTTGAGGAT
ATGGTCCGCCAAGAGATTACTCCTCGATACAAGACATGCAGTGTTCTGCTGCAGGAAATT
AAACAAAAGAATATGTATGAGGCTGCCGATAAGATTGAATTGTTCATGAAGAAAATGAAG
GCCGGCTGA