Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400044895
CDS Infomation

pacid=37432625 polypeptide=PGSC0003DMP400030446 locus=PGSC0003DMG402017416 ID=PGSC0003DMT400044895.v4.03 annot-version=v4.03
Sequence

ATGGAAATCTTATCTATGTTAATGGGGAAAGTCACAGATTGCTTGATGCAGCCAGTGACG
CAGGGGATTGGGTATGTCTTTAATTACAAGAGCAACATCAGATCTATGGATAATGAATCT
CAGAAGCTGGAGAAAATCAAAAGCGGAGTTCAACAAAGAGCGGAGGCTGCCCGGAGAAAC
TTACAAGTCATTTCTCCCAGTATTGAGGCTTGGTTAACTACCGTTGATACAACTACTGCA
GATATGGAAGCTGTAACGCGAGGTAGAATTGAGGTTGAAAGGGGTTGCTTCTATGGTTGG
TGTCCAAACTTGAAGTCACGTTATTCGCTGAGTAGGAGATCTAAGAGAATTAAACTAGCT
GTGATTAGTCTTCAAATTGAAGGTAACAATCATGTTAATTTCTCTTATCCTGCACCACTT
GAAGTTGAAATTGGAGCTATACCTAGAAACAGTTGTGAGGAGGAGTTTGACTCCAGAAAA
TTAAAAGAGGAAGAGGTAATGGAAGCTTTGAGAGATGAGGAGGTTACTATTATTGGGATA
TGTGGTATGGGTGGTATCGGTAAAACGACATTGGCCGAGAAAATTAGACAAAGGGCGAAG
CAAGAAAAATTGTTTGATGAGGTTGTCATGGTAACTGTCGGTCAGAAACCAAACTTCAAA
AGAATTCAAGATGAAATTGCAAGAGGAGTTGGTTTGACATTAACAGATGACAATTTATGG
AGTCGTGGAGATCAGTTGCGTGCAAGGTTAATGGGTCAAGACAGTATCCTTATAATCTTA
GATGATGTATGGGAGGTTCTTAATCTTAACAAGATTGGAATTCCCAGTGGTAGCAAGCAC
AACTGTCAGTGCAAAGTGAACTTGACTACACGTCTCCGAAATGTTTGTGAAACAATGGAG
GCTCAAAAGATCATAGAAATTGGAATCTTATCTGGAAAGGAAGCATGGCTCCTTTTTAGG
CAAAAAGCTGGTAATTCAGTTGATGATCTTTCTCTTAATCACATAGCAAAAAATGTTGTG
AAAGAATGCAAGGGGTTGCCGCTTGCAATTATTACAGTTGCTGGTGCGCTAAAGAATAAA
AGGAAGCCTTCGTGGGAGGATGCCCTTGTACAATTACAAAGATCTGCACCAAAAAATATT
CCGGGAGTGCTTACATATGTATATCAACCTCTGAAGCTAAGTTATGATCACTTAGAAAGT
GATGAAGCCAGGTACTTCTTTTTGTTTTGTTGCTTGTTTGAGGAAGATAGGGATATTTGG
CCTGAAGAGTTACTTAGATATGGAATGGGGCTTAGCATGTTTTCTAAGATTAAAAATTTT
GTAGAAGCAAGAAAGAGGGTGTGTCATCTATTAGAAACATTAAAAGATCGTTTCTTGTTA
TCCGAAGGCTCCTCTGGAGATTATGTCAAATTGCATGATGTGATCCGTGATGTGGCTATA
TATATTGCATCTGAGGGAAAGCATGTTTTTATGGTAAGTCATGACGTGAACTCCGAAGAG
TTCCCAAGAAGAACTTCTTATGAGCCTTACAGTCACATGTCAATTGTCACAAAAGGATTC
AATGATCTTCCTAAACCAATATTTTGCCCAAGACTCGAGTTTCTAATGTTGAAATTCATT
GAAAAGCCAAATAAATTACAACATGATTATTTTATTGGGATGAGCAAACTCAATGTCTTA
ACCCTGAGGAGAGATAGATATAAGGATTCCATTTTTTCTTTTCCATCATCAGTTCAGAGG
TTGTCAAATCTGCGGACGCTATCTCTGATTAATTTAAGGTTGGATGACATATCTGTTATT
GGTGGACTTGCCACATTAGAAGTTCTCAGCATCAGAGATTCTCACTTAAAAGAGCTTCCA
ATGGAGATAGGGAACTTGGTCAATCTAATTATGTTCGAGTTTTGGAATGAGCAAGGAGAA
CTTATAAGGATTTCACCGGGGGTCTTATCAAGGCTAGTTCGACTGGAGGAACTACATATG
GTGGGAGTAGAACGTTGTAGTTACTCCGCCTTGCGGGAGCTCGAATCCTTATTTGAATTG
ACTTCACTAACATTGTTCTCATGTTCTGGAGATGTGATCTACAGTAACTTGGGCCTTTCC
TCCAAGTTGACACAGTACGCTCTAAAAGTGGGACAACAAGGTCGTCGTTGCCTCGATACT
TCACTCATGGATAACTACTACGATAGGATTATGGATCTCAAGGTCACTGAGAGCACCCCG
TTGGCTGATTGGATCCGCCACATGTTGAGGAAGAGCGAACTTGTCCATTCAAGCGGAAAT
GGCTCCAAGAATGTGTTGACAGAGTTGCTGGTTGATAAATTTCAGAACGTGAAAGATCTC
CGTCTGGCTGTTTGTGATTCATTGACACATTTACTCAGTATTCACTGTCAGAATGATATT
CCATTCTCCAAACTCGAAAGACTGGAGGTAACTAGATTTTGTAGTCTACAGTATCTTTTT
TACATGTCCTTGGCTGCAGGGAGTTCGTCAAACTCGACAGTAGCTTGCCCTGATAATGAG
GAAGAGGATCAACCAATAAAGCTCCCCAATTTATATTACATAAAGCTTCAATTTCTGGAA
TGCTTCACTCACTTTTGCAGTGACAGTGTTGAGGGAATTGAGTTCCCTCAGTTACAAAAC
ATGTGCCTCTATGAGTTACCTCAGTTTCAAAATTTTTGGCCTCCAGACAACAACTCTGTC
AATGACTCAAATCCTCTTTTTGATGAAAAGGTTTCTTGTCCCAACCTGGAAGAACTATGT
ATCAGCAGGGCTGACAGCATAACTGCTTTATTCTCTCACCAACTTCCAAATGGCTTCTTT
AACAAACTTAAAGAATTGGAAGTATGGAAGTGCGAAAAATTAAGAAACTTGATGTCTCCA
TCAGTGGCCAGAGGTGTTCTGAATCTCCGAATATTAAAGATAGGTGCCTCTCCATCAATG
GAGCAAGTGATCACGGAAGAGGAACAACGAGGAGAAGAAATGACTAACGATCCCTTATTT
CCCCTATTGGAAGAGCTGGTGCTCTACGAGCTACCAAAGTTGGGACATTTCTTCCAGACG
AAGCATGCTCTTGAATTTCCATTCCTCAGAGAAGTGGAAATTAGAAACTGCCCTGAAATG
AAGATGTTTATCCATCTGGGATCTGTGAGCACACCGAGTCTGAAAAGTCTGGTTGTAGAA
AAACCAATCATTGGAGGTGTTGAGGTGAAAGATGGTCTCAATGCAGTTATACAGAATATC
TTCAATTCTAAGGAACAAGAAGCTAACTAG

Peptide Sequence

PEP ID

PGSC0003DMP400030446
PEP Infomation

pacid=37432625 transcript=PGSC0003DMT400044895 locus=PGSC0003DMG402017416 ID=PGSC0003DMT400044895.v4.03 annot-version=v4.03
Sequence

MEILSMLMGKVTDCLMQPVTQGIGYVFNYKSNIRSMDNESQKLEKIKSGVQQRAEAARRN
LQVISPSIEAWLTTVDTTTADMEAVTRGRIEVERGCFYGWCPNLKSRYSLSRRSKRIKLA
VISLQIEGNNHVNFSYPAPLEVEIGAIPRNSCEEEFDSRKLKEEEVMEALRDEEVTIIGI
CGMGGIGKTTLAEKIRQRAKQEKLFDEVVMVTVGQKPNFKRIQDEIARGVGLTLTDDNLW
SRGDQLRARLMGQDSILIILDDVWEVLNLNKIGIPSGSKHNCQCKVNLTTRLRNVCETME
AQKIIEIGILSGKEAWLLFRQKAGNSVDDLSLNHIAKNVVKECKGLPLAIITVAGALKNK
RKPSWEDALVQLQRSAPKNIPGVLTYVYQPLKLSYDHLESDEARYFFLFCCLFEEDRDIW
PEELLRYGMGLSMFSKIKNFVEARKRVCHLLETLKDRFLLSEGSSGDYVKLHDVIRDVAI
YIASEGKHVFMVSHDVNSEEFPRRTSYEPYSHMSIVTKGFNDLPKPIFCPRLEFLMLKFI
EKPNKLQHDYFIGMSKLNVLTLRRDRYKDSIFSFPSSVQRLSNLRTLSLINLRLDDISVI
GGLATLEVLSIRDSHLKELPMEIGNLVNLIMFEFWNEQGELIRISPGVLSRLVRLEELHM
VGVERCSYSALRELESLFELTSLTLFSCSGDVIYSNLGLSSKLTQYALKVGQQGRRCLDT
SLMDNYYDRIMDLKVTESTPLADWIRHMLRKSELVHSSGNGSKNVLTELLVDKFQNVKDL
RLAVCDSLTHLLSIHCQNDIPFSKLERLEVTRFCSLQYLFYMSLAAGSSSNSTVACPDNE
EEDQPIKLPNLYYIKLQFLECFTHFCSDSVEGIEFPQLQNMCLYELPQFQNFWPPDNNSV
NDSNPLFDEKVSCPNLEELCISRADSITALFSHQLPNGFFNKLKELEVWKCEKLRNLMSP
SVARGVLNLRILKIGASPSMEQVITEEEQRGEEMTNDPLFPLLEELVLYELPKLGHFFQT
KHALEFPFLREVEIRNCPEMKMFIHLGSVSTPSLKSLVVEKPIIGGVEVKDGLNAVIQNI
FNSKEQEAN*

Transcript Sequence

Transcript ID

PGSC0003DMT400044895
Transcript Infomation

pacid=37432625 locus=PGSC0003DMG402017416 ID=PGSC0003DMT400044895.v4.03 annot-version=v4.03
Sequence

ATGGAAATCTTATCTATGTTAATGGGGAAAGTCACAGATTGCTTGATGCAGCCAGTGACG
CAGGGGATTGGGTATGTCTTTAATTACAAGAGCAACATCAGATCTATGGATAATGAATCT
CAGAAGCTGGAGAAAATCAAAAGCGGAGTTCAACAAAGAGCGGAGGCTGCCCGGAGAAAC
TTACAAGTCATTTCTCCCAGTATTGAGGCTTGGTTAACTACCGTTGATACAACTACTGCA
GATATGGAAGCTGTAACGCGAGGTAGAATTGAGGTTGAAAGGGGTTGCTTCTATGGTTGG
TGTCCAAACTTGAAGTCACGTTATTCGCTGAGTAGGAGATCTAAGAGAATTAAACTAGCT
GTGATTAGTCTTCAAATTGAAGGTAACAATCATGTTAATTTCTCTTATCCTGCACCACTT
GAAGTTGAAATTGGAGCTATACCTAGAAACAGTTGTGAGGAGGAGTTTGACTCCAGAAAA
TTAAAAGAGGAAGAGGTAATGGAAGCTTTGAGAGATGAGGAGGTTACTATTATTGGGATA
TGTGGTATGGGTGGTATCGGTAAAACGACATTGGCCGAGAAAATTAGACAAAGGGCGAAG
CAAGAAAAATTGTTTGATGAGGTTGTCATGGTAACTGTCGGTCAGAAACCAAACTTCAAA
AGAATTCAAGATGAAATTGCAAGAGGAGTTGGTTTGACATTAACAGATGACAATTTATGG
AGTCGTGGAGATCAGTTGCGTGCAAGGTTAATGGGTCAAGACAGTATCCTTATAATCTTA
GATGATGTATGGGAGGTTCTTAATCTTAACAAGATTGGAATTCCCAGTGGTAGCAAGCAC
AACTGTCAGTGCAAAGTGAACTTGACTACACGTCTCCGAAATGTTTGTGAAACAATGGAG
GCTCAAAAGATCATAGAAATTGGAATCTTATCTGGAAAGGAAGCATGGCTCCTTTTTAGG
CAAAAAGCTGGTAATTCAGTTGATGATCTTTCTCTTAATCACATAGCAAAAAATGTTGTG
AAAGAATGCAAGGGGTTGCCGCTTGCAATTATTACAGTTGCTGGTGCGCTAAAGAATAAA
AGGAAGCCTTCGTGGGAGGATGCCCTTGTACAATTACAAAGATCTGCACCAAAAAATATT
CCGGGAGTGCTTACATATGTATATCAACCTCTGAAGCTAAGTTATGATCACTTAGAAAGT
GATGAAGCCAGGTACTTCTTTTTGTTTTGTTGCTTGTTTGAGGAAGATAGGGATATTTGG
CCTGAAGAGTTACTTAGATATGGAATGGGGCTTAGCATGTTTTCTAAGATTAAAAATTTT
GTAGAAGCAAGAAAGAGGGTGTGTCATCTATTAGAAACATTAAAAGATCGTTTCTTGTTA
TCCGAAGGCTCCTCTGGAGATTATGTCAAATTGCATGATGTGATCCGTGATGTGGCTATA
TATATTGCATCTGAGGGAAAGCATGTTTTTATGGTAAGTCATGACGTGAACTCCGAAGAG
TTCCCAAGAAGAACTTCTTATGAGCCTTACAGTCACATGTCAATTGTCACAAAAGGATTC
AATGATCTTCCTAAACCAATATTTTGCCCAAGACTCGAGTTTCTAATGTTGAAATTCATT
GAAAAGCCAAATAAATTACAACATGATTATTTTATTGGGATGAGCAAACTCAATGTCTTA
ACCCTGAGGAGAGATAGATATAAGGATTCCATTTTTTCTTTTCCATCATCAGTTCAGAGG
TTGTCAAATCTGCGGACGCTATCTCTGATTAATTTAAGGTTGGATGACATATCTGTTATT
GGTGGACTTGCCACATTAGAAGTTCTCAGCATCAGAGATTCTCACTTAAAAGAGCTTCCA
ATGGAGATAGGGAACTTGGTCAATCTAATTATGTTCGAGTTTTGGAATGAGCAAGGAGAA
CTTATAAGGATTTCACCGGGGGTCTTATCAAGGCTAGTTCGACTGGAGGAACTACATATG
GTGGGAGTAGAACGTTGTAGTTACTCCGCCTTGCGGGAGCTCGAATCCTTATTTGAATTG
ACTTCACTAACATTGTTCTCATGTTCTGGAGATGTGATCTACAGTAACTTGGGCCTTTCC
TCCAAGTTGACACAGTACGCTCTAAAAGTGGGACAACAAGGTCGTCGTTGCCTCGATACT
TCACTCATGGATAACTACTACGATAGGATTATGGATCTCAAGGTCACTGAGAGCACCCCG
TTGGCTGATTGGATCCGCCACATGTTGAGGAAGAGCGAACTTGTCCATTCAAGCGGAAAT
GGCTCCAAGAATGTGTTGACAGAGTTGCTGGTTGATAAATTTCAGAACGTGAAAGATCTC
CGTCTGGCTGTTTGTGATTCATTGACACATTTACTCAGTATTCACTGTCAGAATGATATT
CCATTCTCCAAACTCGAAAGACTGGAGGTAACTAGATTTTGTAGTCTACAGTATCTTTTT
TACATGTCCTTGGCTGCAGGGAGTTCGTCAAACTCGACAGTAGCTTGCCCTGATAATGAG
GAAGAGGATCAACCAATAAAGCTCCCCAATTTATATTACATAAAGCTTCAATTTCTGGAA
TGCTTCACTCACTTTTGCAGTGACAGTGTTGAGGGAATTGAGTTCCCTCAGTTACAAAAC
ATGTGCCTCTATGAGTTACCTCAGTTTCAAAATTTTTGGCCTCCAGACAACAACTCTGTC
AATGACTCAAATCCTCTTTTTGATGAAAAGGTTTCTTGTCCCAACCTGGAAGAACTATGT
ATCAGCAGGGCTGACAGCATAACTGCTTTATTCTCTCACCAACTTCCAAATGGCTTCTTT
AACAAACTTAAAGAATTGGAAGTATGGAAGTGCGAAAAATTAAGAAACTTGATGTCTCCA
TCAGTGGCCAGAGGTGTTCTGAATCTCCGAATATTAAAGATAGGTGCCTCTCCATCAATG
GAGCAAGTGATCACGGAAGAGGAACAACGAGGAGAAGAAATGACTAACGATCCCTTATTT
CCCCTATTGGAAGAGCTGGTGCTCTACGAGCTACCAAAGTTGGGACATTTCTTCCAGACG
AAGCATGCTCTTGAATTTCCATTCCTCAGAGAAGTGGAAATTAGAAACTGCCCTGAAATG
AAGATGTTTATCCATCTGGGATCTGTGAGCACACCGAGTCTGAAAAGTCTGGTTGTAGAA
AAACCAATCATTGGAGGTGTTGAGGTGAAAGATGGTCTCAATGCAGTTATACAGAATATC
TTCAATTCTAAGGAACAAGAAGCTAACTAG