Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400044888
CDS Infomation

pacid=37431626 polypeptide=PGSC0003DMP400030439 locus=PGSC0003DMG402017414 ID=PGSC0003DMT400044888.v4.03 annot-version=v4.03
Sequence

ATGAAGGTGGCCCCAAAAGTAATACTGCTCTTCAGAGATCCAACGGGCTTCGGCATCGCC
ATCTTCGAAGCTCTTCAACCAAACCCTAAATCCAACCTTCAAAAACGGCAAGAATCGCTC
GATTTATCCTTGCAACGTTACGGAATCAAAGATCAAAAGGTTACGGTTGAAGTCGTTCAT
TTTCTCAATGGAGCAAATCTCGAGGTGTCTCTGTTACTACTGGAAAACTATGAGCCTCCA
ACACTTGCTTGTGCTCTCAATGAAGTTCTGGCATTGTTAGTAGGAGATGGGTTGTCAAAT
ATGCCCACAATTATAGCCCCTTTTGTTGTGGCTGCATCTAAGCTTAAGATGGAAAATAGA
ACTTCTGTTTCAGTTGACAATATATCAGTTTATGGGTTGCAAGTAGGTGCCTCTAGTGAC
CTTACTAAAGCTTTGTGCACAAATTTGCAAATCCCTCCCCCATCGTTGCAGCTTTTTAAC
GAACAGTTGGCCTGCTTACTTCAATTGGTTCAAGTCCTGAAGATGCCTACTTTTGTTATA
ATTGGCAAAAAAGGTCAAAATTTGCATCGTAAGACTTCAGAAGAAGAACATGAGGTGATA
CATGAGATAGGACAGCATTTGGCTAGCCTCTCATCTCTTAGTTTCTCAGGAGAAAAGATA
GCCTGGGATGCAACAAAGTCTTCAAAAGAAACACAAGAGCCTTGGCGTGCATTATATGGT
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400030439
PEP Infomation

pacid=37431626 transcript=PGSC0003DMT400044888 locus=PGSC0003DMG402017414 ID=PGSC0003DMT400044888.v4.03 annot-version=v4.03
Sequence

MKVAPKVILLFRDPTGFGIAIFEALQPNPKSNLQKRQESLDLSLQRYGIKDQKVTVEVVH
FLNGANLEVSLLLLENYEPPTLACALNEVLALLVGDGLSNMPTIIAPFVVAASKLKMENR
TSVSVDNISVYGLQVGASSDLTKALCTNLQIPPPSLQLFNEQLACLLQLVQVLKMPTFVI
IGKKGQNLHRKTSEEEHEVIHEIGQHLASLSSLSFSGEKIAWDATKSSKETQEPWRALYG
*

Transcript Sequence

Transcript ID

PGSC0003DMT400044888
Transcript Infomation

pacid=37431626 locus=PGSC0003DMG402017414 ID=PGSC0003DMT400044888.v4.03 annot-version=v4.03
Sequence

ATGAAGGTGGCCCCAAAAGTAATACTGCTCTTCAGAGATCCAACGGGCTTCGGCATCGCC
ATCTTCGAAGCTCTTCAACCAAACCCTAAATCCAACCTTCAAAAACGGCAAGAATCGCTC
GATTTATCCTTGCAACGTTACGGAATCAAAGATCAAAAGGTTACGGTTGAAGTCGTTCAT
TTTCTCAATGGAGCAAATCTCGAGGTGTCTCTGTTACTACTGGAAAACTATGAGCCTCCA
ACACTTGCTTGTGCTCTCAATGAAGTTCTGGCATTGTTAGTAGGAGATGGGTTGTCAAAT
ATGCCCACAATTATAGCCCCTTTTGTTGTGGCTGCATCTAAGCTTAAGATGGAAAATAGA
ACTTCTGTTTCAGTTGACAATATATCAGTTTATGGGTTGCAAGTAGGTGCCTCTAGTGAC
CTTACTAAAGCTTTGTGCACAAATTTGCAAATCCCTCCCCCATCGTTGCAGCTTTTTAAC
GAACAGTTGGCCTGCTTACTTCAATTGGTTCAAGTCCTGAAGATGCCTACTTTTGTTATA
ATTGGCAAAAAAGGTCAAAATTTGCATCGTAAGACTTCAGAAGAAGAACATGAGGTGATA
CATGAGATAGGACAGCATTTGGCTAGCCTCTCATCTCTTAGTTTCTCAGGAGAAAAGATA
GCCTGGGATGCAACAAAGTCTTCAAAAGAAACACAAGAGCCTTGGCGTGCATTATATGGT
TGA