Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400044861
CDS Infomation

pacid=37432055 polypeptide=PGSC0003DMP400030414 locus=PGSC0003DMG400017408 ID=PGSC0003DMT400044861.v4.03 annot-version=v4.03
Sequence

ATGGAAGATTCCGAGGGAAGTAATCCATATAAGAGTACACTGAAGAGACTGGCCAGCTAT
GATTATATTTCCAAAAATTATGGGTCATCTGGGATTGCTGGTGCATTTTTTATTGCCATT
ATTATACCAATATTCCTCTCTATATTACTTATGGGGAAGAAGAAGGCAAAACAGAGAGGT
GTTCCGGTTCAAGTTGGCGGTGAGCCAGGTCTTGCAATGCGCAATGCTAAATCAGCCAGA
TTAGTTGAAGTTCCCTGGGAAGGGGCTACAACTGTAGCAGCTCTATTTGAGCAGTCATGT
AAAAAACATTCCTCTTATCGCTGTCTTGGAGCTAGAAAGCTAGTTGGCAGGGACTTTGTT
ACTGCAAGTGATGGAAGGAAGTTTGAGAAACTTCACTTGGGGGAGTATCAGTGGGAGTCT
TATGGACAAGTATTTGATCGCGCTTGCAACTTTGCCTCTGGTCTTATTAGTTTGGGTCAT
GATGTGGACACCCGTGCTGCTATCTTTGCAGAATCTCGTGCGGAGTGGCTCATTGCCTTT
CAGGGATGCTTCCGGCAGAATATTACTGTTGTTACCATTTATGCTTCTTTGGGTGATGAT
GCACTTATATATTCACTCAATGAGACTCAAGTATCTACATTAATATGTGATGCCAAGCAA
CTGAAAAAAGTGGCTTCTGTTAGTTCGAGCCTGAAAACCATCAAGAATGTCATCTATTTC
GAGGATGACGAGACGGCAACAGATTCCACAAATATTGACAGCTGGAGGGTGTCGTCTTTC
TCAGAAGTTGAAAAGCTGGGTAGAAATAGTCCTATTCAGGCAAGATTGCCTATCAAAGAA
GATATTGCTGTGATCATGTATACAAGTGGCAGTACAGGCTTGCCTAAGGGTGTTATGATA
ACTCATGGCAACATTGTAGCCACTGCAGCTGCTGTTATGACTGTGATTCCAAAACTTGGA
ACCAGTGATGTCTATTTGGCTTACCTTCCTTTAGCTCACGTTTTTGAGTTGGCTGCTGAG
ACTGTAATGCTGACTGCAGGTGCTTGTATTGGTTATGGCTCAGCCCTCACATTGACAGAC
ACATCTAACAAAGTCATGAAGGGGACCAAGGGAGATGCTACAGTTCTAAAACCTACTTTA
ATGGCAGCAGTTCCAGCCATTCTAGATCGTGTTCGGGATGGTGTTATGAAGAAGGTTGAG
GAGAAGGCAGGTTCTGCCAAGAAACTTTTCCACATTGCCTTTAACCGTCGATTGGCTGCT
ATGGAAGGTAGCTGGTTTGGAGCTTGGGGTCTAGAGAAACAATTGTGGGATATCATTATA
TTCAAAAAGGTGAGGGCTGTGCTTGGAGGAGATATCCGTTTCATGCTTTGCGGTGGTGCT
CCTCTATCAGGGGATACTCAAAGATTTATCAACATTTGTATGGGAGCTCCAATTGGTCAA
GGGTATGGTTTGACAGAGACATTTGCTGGAGCTGCTTTTTCTGAGTGGGATGATCCTTCT
GTCGGGCGTGTTGGTCCTCCTCTTCCTTGTTGCTACATAAAGCTTATTACTTGGGAAGAA
GGAGGTTACAGAATAGTTGATAAGCCTATGCCTCGGGGAGAAGTAGTGGTTGGTGGATGC
AGCATAACTGCTGGTTACTTCAACAATGAGGAAAAAACTAATGAGGTTTATAAGGTTGAT
GAGACAGGCATGCGCTGGTTCTACACTGGTGACGTTGGAAGGTTTCATCCTGATGGATGC
ATTGAAATTATTGATAGAAAGAAGGATATTGTTAAGCTTCAGCACGGGGAGTATATCTCA
CTTGGAAAGGTTGAGGCAGCACTTCTATCAAGCAATTACGTGGAGAGCATCATGGTGTAT
GCAGACCCCTTCCATAATTATTGTGTAGCTTTAGTTGTCCCTTCACGCCCGGTGCTTGAG
AAATGGGCCCAAGAAAATGGCATCCCGCACAAAGATTTTTCCGAACTGTGTGACAGAGTA
GAATCAGTCAATGAGATCAAGCAATCACTTTCAAAGGTAGCAAAAGCTGCAAAATTGGAC
AAGTTTGAGCTTCCTGCCAAGATCAAGTTAATACCAGAGTCTTGGACTCCTGAGTCTGGA
TTGGTAACTGCTGCTCTGAAATTGAAACGGGAACCTCTGAAGGCTCGATATAAGAATGAG
TTAGAAAAGTTATATCAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400030414
PEP Infomation

pacid=37432055 transcript=PGSC0003DMT400044861 locus=PGSC0003DMG400017408 ID=PGSC0003DMT400044861.v4.03 annot-version=v4.03
Sequence

MEDSEGSNPYKSTLKRLASYDYISKNYGSSGIAGAFFIAIIIPIFLSILLMGKKKAKQRG
VPVQVGGEPGLAMRNAKSARLVEVPWEGATTVAALFEQSCKKHSSYRCLGARKLVGRDFV
TASDGRKFEKLHLGEYQWESYGQVFDRACNFASGLISLGHDVDTRAAIFAESRAEWLIAF
QGCFRQNITVVTIYASLGDDALIYSLNETQVSTLICDAKQLKKVASVSSSLKTIKNVIYF
EDDETATDSTNIDSWRVSSFSEVEKLGRNSPIQARLPIKEDIAVIMYTSGSTGLPKGVMI
THGNIVATAAAVMTVIPKLGTSDVYLAYLPLAHVFELAAETVMLTAGACIGYGSALTLTD
TSNKVMKGTKGDATVLKPTLMAAVPAILDRVRDGVMKKVEEKAGSAKKLFHIAFNRRLAA
MEGSWFGAWGLEKQLWDIIIFKKVRAVLGGDIRFMLCGGAPLSGDTQRFINICMGAPIGQ
GYGLTETFAGAAFSEWDDPSVGRVGPPLPCCYIKLITWEEGGYRIVDKPMPRGEVVVGGC
SITAGYFNNEEKTNEVYKVDETGMRWFYTGDVGRFHPDGCIEIIDRKKDIVKLQHGEYIS
LGKVEAALLSSNYVESIMVYADPFHNYCVALVVPSRPVLEKWAQENGIPHKDFSELCDRV
ESVNEIKQSLSKVAKAAKLDKFELPAKIKLIPESWTPESGLVTAALKLKREPLKARYKNE
LEKLYQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400044861
Transcript Infomation

pacid=37432055 locus=PGSC0003DMG400017408 ID=PGSC0003DMT400044861.v4.03 annot-version=v4.03
Sequence

ATGGAAGATTCCGAGGGAAGTAATCCATATAAGAGTACACTGAAGAGACTGGCCAGCTAT
GATTATATTTCCAAAAATTATGGGTCATCTGGGATTGCTGGTGCATTTTTTATTGCCATT
ATTATACCAATATTCCTCTCTATATTACTTATGGGGAAGAAGAAGGCAAAACAGAGAGGT
GTTCCGGTTCAAGTTGGCGGTGAGCCAGGTCTTGCAATGCGCAATGCTAAATCAGCCAGA
TTAGTTGAAGTTCCCTGGGAAGGGGCTACAACTGTAGCAGCTCTATTTGAGCAGTCATGT
AAAAAACATTCCTCTTATCGCTGTCTTGGAGCTAGAAAGCTAGTTGGCAGGGACTTTGTT
ACTGCAAGTGATGGAAGGAAGTTTGAGAAACTTCACTTGGGGGAGTATCAGTGGGAGTCT
TATGGACAAGTATTTGATCGCGCTTGCAACTTTGCCTCTGGTCTTATTAGTTTGGGTCAT
GATGTGGACACCCGTGCTGCTATCTTTGCAGAATCTCGTGCGGAGTGGCTCATTGCCTTT
CAGGGATGCTTCCGGCAGAATATTACTGTTGTTACCATTTATGCTTCTTTGGGTGATGAT
GCACTTATATATTCACTCAATGAGACTCAAGTATCTACATTAATATGTGATGCCAAGCAA
CTGAAAAAAGTGGCTTCTGTTAGTTCGAGCCTGAAAACCATCAAGAATGTCATCTATTTC
GAGGATGACGAGACGGCAACAGATTCCACAAATATTGACAGCTGGAGGGTGTCGTCTTTC
TCAGAAGTTGAAAAGCTGGGTAGAAATAGTCCTATTCAGGCAAGATTGCCTATCAAAGAA
GATATTGCTGTGATCATGTATACAAGTGGCAGTACAGGCTTGCCTAAGGGTGTTATGATA
ACTCATGGCAACATTGTAGCCACTGCAGCTGCTGTTATGACTGTGATTCCAAAACTTGGA
ACCAGTGATGTCTATTTGGCTTACCTTCCTTTAGCTCACGTTTTTGAGTTGGCTGCTGAG
ACTGTAATGCTGACTGCAGGTGCTTGTATTGGTTATGGCTCAGCCCTCACATTGACAGAC
ACATCTAACAAAGTCATGAAGGGGACCAAGGGAGATGCTACAGTTCTAAAACCTACTTTA
ATGGCAGCAGTTCCAGCCATTCTAGATCGTGTTCGGGATGGTGTTATGAAGAAGGTTGAG
GAGAAGGCAGGTTCTGCCAAGAAACTTTTCCACATTGCCTTTAACCGTCGATTGGCTGCT
ATGGAAGGTAGCTGGTTTGGAGCTTGGGGTCTAGAGAAACAATTGTGGGATATCATTATA
TTCAAAAAGGTGAGGGCTGTGCTTGGAGGAGATATCCGTTTCATGCTTTGCGGTGGTGCT
CCTCTATCAGGGGATACTCAAAGATTTATCAACATTTGTATGGGAGCTCCAATTGGTCAA
GGGTATGGTTTGACAGAGACATTTGCTGGAGCTGCTTTTTCTGAGTGGGATGATCCTTCT
GTCGGGCGTGTTGGTCCTCCTCTTCCTTGTTGCTACATAAAGCTTATTACTTGGGAAGAA
GGAGGTTACAGAATAGTTGATAAGCCTATGCCTCGGGGAGAAGTAGTGGTTGGTGGATGC
AGCATAACTGCTGGTTACTTCAACAATGAGGAAAAAACTAATGAGGTTTATAAGGTTGAT
GAGACAGGCATGCGCTGGTTCTACACTGGTGACGTTGGAAGGTTTCATCCTGATGGATGC
ATTGAAATTATTGATAGAAAGAAGGATATTGTTAAGCTTCAGCACGGGGAGTATATCTCA
CTTGGAAAGGTTGAGGCAGCACTTCTATCAAGCAATTACGTGGAGAGCATCATGGTGTAT
GCAGACCCCTTCCATAATTATTGTGTAGCTTTAGTTGTCCCTTCACGCCCGGTGCTTGAG
AAATGGGCCCAAGAAAATGGCATCCCGCACAAAGATTTTTCCGAACTGTGTGACAGAGTA
GAATCAGTCAATGAGATCAAGCAATCACTTTCAAAGGTAGCAAAAGCTGCAAAATTGGAC
AAGTTTGAGCTTCCTGCCAAGATCAAGTTAATACCAGAGTCTTGGACTCCTGAGTCTGGA
TTGGTAACTGCTGCTCTGAAATTGAAACGGGAACCTCTGAAGGCTCGATATAAGAATGAG
TTAGAAAAGTTATATCAGTGA