Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400044855
CDS Infomation

pacid=37431245 polypeptide=PGSC0003DMP400030408 locus=PGSC0003DMG400017407 ID=PGSC0003DMT400044855.v4.03 annot-version=v4.03
Sequence

ATGGCGGAAGTTTCTAGAATTCTCCAATCAGTTCTTCTTCCTCCTTTCTCCAATAAACTA
GACGGAATCACTAATTCCCATTTTAGTTCCTACAAATTGTATAGAAGAAACAAACTCAAC
ATCAGTATCCGTTGTTCATCAATTTCTACAACTGAAGCAACCAAATCCACAAAGACCCAG
AACATTCCATGGGGTTGCGAGACTGATTCTCTAGAAAATGCGTCGAATTTGCAGAAATGG
TTGTCAGAATCAGGGCTTCCTTCTCAAAAAATGGACTTACAAAGAGTGGATGTTGGAGAA
AGAGGACTTGTTGCTAACAACAATATCAGGAAAGGGGAAAAACTGCTTTTTGTTCCTCCT
TCACTTGTCATCACTGCTGATTCGAAATGGAGCAATTCAGATGCTGGTGATGTTTTAAAA
CAATACAATGTACCAGATTGGCCTTTTATTGCTACATATTTAATAAGTGAGGCAAGCCTC
ATGAAGTCTTCAAGATGGAGCAACTACATATCTGCCTTGCCTAGGCAGCCTTACTCTCTC
TTATACTGGACTCAATCAGAGCTAGATAGGTACTTGGAAGCATCACAAATAAGACAACGG
GCGGTTGAAAGGATAAATAACGTCATTGGAACGTACAATGACTTAAGGCTCAGAATATTT
TCCAAGCATCCTGATTTATTTCCTGAAGAGATATTCAACCAAGATACTTTCAACTGGTCA
TTTGGAATTCTCTTCTCACGTTTGGTCAGGTTACCCTCTATGGATGGAAGAGTTGCGTTG
GTTCCTTGGGCAGATATGTTGAATCATAATTGTGAGGTGGAAACATTTCTTGACTATGAT
AAATCATCGCAAGGAATCGTCTTTACAACAGACAGGGTATATCTGCCAGGTGAGCAGGTT
TTTATATCATATGGAAGGAAATCTAATGGAGAACTTTTGCTTTCATATGGATTTGTTCCT
AAAGAAGGGACCAATCCAAGCGACTCAGTTGAGGTGTCATTGGCACTTAAGAAATCTGAC
AAATGTTACAAAGAGAAGGTGGAAGCTCTAAAGAAGCATGGATTATCAGCATCGGAATGT
TTTCCAGTACAAGTTACTGGTTGGCCACTGGAGTTGATGGCTTTTGCTTATCTAGTGGTC
AGTCCACCTAGCATGAGCAGACAGTTTGAAGAGATGGCTGCTGCTGCATCAAATAAGGCA
ACATCAAAGAAAGATATCAAGTATCCAGAAATAGAAGAAGATGCATTGCAATTTATTCTC
GATAGTTGTGAATCTAGCATATCAAAGTATTCCAAATTCCTTCAGGCAAGTGGAGAAATG
GATCTCGATGTGACAAATCCAAAGCAACTAAACAGAAGATTGTTTCTGAAACAGCTAGCA
GTTGACCTGTGTACAAGTGAGCGAAGGATACTCTATCGTAGCCAATATATATTGAGGAGA
AGATTGAGGGACATAAGGAGTGGAGAATTGAAGGCTCTGAATTTATTTGATGGACTTAAG
AACCTTTTTAAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400030408
PEP Infomation

pacid=37431245 transcript=PGSC0003DMT400044855 locus=PGSC0003DMG400017407 ID=PGSC0003DMT400044855.v4.03 annot-version=v4.03
Sequence

MAEVSRILQSVLLPPFSNKLDGITNSHFSSYKLYRRNKLNISIRCSSISTTEATKSTKTQ
NIPWGCETDSLENASNLQKWLSESGLPSQKMDLQRVDVGERGLVANNNIRKGEKLLFVPP
SLVITADSKWSNSDAGDVLKQYNVPDWPFIATYLISEASLMKSSRWSNYISALPRQPYSL
LYWTQSELDRYLEASQIRQRAVERINNVIGTYNDLRLRIFSKHPDLFPEEIFNQDTFNWS
FGILFSRLVRLPSMDGRVALVPWADMLNHNCEVETFLDYDKSSQGIVFTTDRVYLPGEQV
FISYGRKSNGELLLSYGFVPKEGTNPSDSVEVSLALKKSDKCYKEKVEALKKHGLSASEC
FPVQVTGWPLELMAFAYLVVSPPSMSRQFEEMAAAASNKATSKKDIKYPEIEEDALQFIL
DSCESSISKYSKFLQASGEMDLDVTNPKQLNRRLFLKQLAVDLCTSERRILYRSQYILRR
RLRDIRSGELKALNLFDGLKNLFK*

Transcript Sequence

Transcript ID

PGSC0003DMT400044855
Transcript Infomation

pacid=37431245 locus=PGSC0003DMG400017407 ID=PGSC0003DMT400044855.v4.03 annot-version=v4.03
Sequence

ATGGCGGAAGTTTCTAGAATTCTCCAATCAGTTCTTCTTCCTCCTTTCTCCAATAAACTA
GACGGAATCACTAATTCCCATTTTAGTTCCTACAAATTGTATAGAAGAAACAAACTCAAC
ATCAGTATCCGTTGTTCATCAATTTCTACAACTGAAGCAACCAAATCCACAAAGACCCAG
AACATTCCATGGGGTTGCGAGACTGATTCTCTAGAAAATGCGTCGAATTTGCAGAAATGG
TTGTCAGAATCAGGGCTTCCTTCTCAAAAAATGGACTTACAAAGAGTGGATGTTGGAGAA
AGAGGACTTGTTGCTAACAACAATATCAGGAAAGGGGAAAAACTGCTTTTTGTTCCTCCT
TCACTTGTCATCACTGCTGATTCGAAATGGAGCAATTCAGATGCTGGTGATGTTTTAAAA
CAATACAATGTACCAGATTGGCCTTTTATTGCTACATATTTAATAAGTGAGGCAAGCCTC
ATGAAGTCTTCAAGATGGAGCAACTACATATCTGCCTTGCCTAGGCAGCCTTACTCTCTC
TTATACTGGACTCAATCAGAGCTAGATAGGTACTTGGAAGCATCACAAATAAGACAACGG
GCGGTTGAAAGGATAAATAACGTCATTGGAACGTACAATGACTTAAGGCTCAGAATATTT
TCCAAGCATCCTGATTTATTTCCTGAAGAGATATTCAACCAAGATACTTTCAACTGGTCA
TTTGGAATTCTCTTCTCACGTTTGGTCAGGTTACCCTCTATGGATGGAAGAGTTGCGTTG
GTTCCTTGGGCAGATATGTTGAATCATAATTGTGAGGTGGAAACATTTCTTGACTATGAT
AAATCATCGCAAGGAATCGTCTTTACAACAGACAGGGTATATCTGCCAGGTGAGCAGGTT
TTTATATCATATGGAAGGAAATCTAATGGAGAACTTTTGCTTTCATATGGATTTGTTCCT
AAAGAAGGGACCAATCCAAGCGACTCAGTTGAGGTGTCATTGGCACTTAAGAAATCTGAC
AAATGTTACAAAGAGAAGGTGGAAGCTCTAAAGAAGCATGGATTATCAGCATCGGAATGT
TTTCCAGTACAAGTTACTGGTTGGCCACTGGAGTTGATGGCTTTTGCTTATCTAGTGGTC
AGTCCACCTAGCATGAGCAGACAGTTTGAAGAGATGGCTGCTGCTGCATCAAATAAGGCA
ACATCAAAGAAAGATATCAAGTATCCAGAAATAGAAGAAGATGCATTGCAATTTATTCTC
GATAGTTGTGAATCTAGCATATCAAAGTATTCCAAATTCCTTCAGGCAAGTGGAGAAATG
GATCTCGATGTGACAAATCCAAAGCAACTAAACAGAAGATTGTTTCTGAAACAGCTAGCA
GTTGACCTGTGTACAAGTGAGCGAAGGATACTCTATCGTAGCCAATATATATTGAGGAGA
AGATTGAGGGACATAAGGAGTGGAGAATTGAAGGCTCTGAATTTATTTGATGGACTTAAG
AACCTTTTTAAATGA