Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400044831
CDS Infomation

pacid=37431115 polypeptide=PGSC0003DMP400030392 locus=PGSC0003DMG400017400 ID=PGSC0003DMT400044831.v4.03 annot-version=v4.03
Sequence

ATGGATTCCTTTGAAGAGGCATCAATTGACATAAAAATGGAGATATTTGAGGCAATTGAA
GATAATTATGGAGGAGTTATTGTGAACATGAAGAAAGAGGAGCCTATGGATTTTCTTAAA
TTTCATTCTATGCTCAAGGCTTCCATTTCTCATTGGAGGCTAAAGGGAAAGAAGGGTGTT
TGGATTAAGTTACCTATAGAACTCGCTCATCTTGTTAATGCAGCAGTAAAGGAGGGATTT
TGGTATCATCATGCAGAGGCAACATATTTGATGCTTGTTTATTGGATTCCTCATGAAATT
CCTCATACTTTTCCTGCTAATGCTTCTCATCGTATTGGTATTGGTGCTTTTGTCTTCAAC
CAAGACGGACAGGTACTGGTAGTTAAAGAGAAATCTGGAGATATGACTGGGACTTGGAAG
CTTCCTACTGGTGTTGTTGATGAGGGGGAGGATATATGTATGGCAGCCGTTAGAGAAGTG
CAAGAAGAGACAGGAATTGAAACAGAATTTGTTGAACTCCTTGCCTTTAGACAAAGTCAC
AAATCATTCTTTGGAAAGTCTGATTTGTTCTTCATATGCATGCTGAAACCACTTAATTTC
ACTATCAACAAGCAAGATGCTGAGATTGAGGAAGCTGAGTGGATGCCAATGGAAGAATAT
GCAAGTCAATCAAAGGTGAACCAAAGTGAACTCTCTAAAATGATAGCCAATATATGTGTA
GCCAAGAAAGAGGAACAGTACACTGGCTTCTCTGCTATTCTTACTACTACTGGACATTCT
GCCAAGAAGTGCTATTTATACTCTAATAACATATAG

Peptide Sequence

PEP ID

PGSC0003DMP400030392
PEP Infomation

pacid=37431115 transcript=PGSC0003DMT400044831 locus=PGSC0003DMG400017400 ID=PGSC0003DMT400044831.v4.03 annot-version=v4.03
Sequence

MDSFEEASIDIKMEIFEAIEDNYGGVIVNMKKEEPMDFLKFHSMLKASISHWRLKGKKGV
WIKLPIELAHLVNAAVKEGFWYHHAEATYLMLVYWIPHEIPHTFPANASHRIGIGAFVFN
QDGQVLVVKEKSGDMTGTWKLPTGVVDEGEDICMAAVREVQEETGIETEFVELLAFRQSH
KSFFGKSDLFFICMLKPLNFTINKQDAEIEEAEWMPMEEYASQSKVNQSELSKMIANICV
AKKEEQYTGFSAILTTTGHSAKKCYLYSNNI*

Transcript Sequence

Transcript ID

PGSC0003DMT400044831
Transcript Infomation

pacid=37431115 locus=PGSC0003DMG400017400 ID=PGSC0003DMT400044831.v4.03 annot-version=v4.03
Sequence

ATGGATTCCTTTGAAGAGGCATCAATTGACATAAAAATGGAGATATTTGAGGCAATTGAA
GATAATTATGGAGGAGTTATTGTGAACATGAAGAAAGAGGAGCCTATGGATTTTCTTAAA
TTTCATTCTATGCTCAAGGCTTCCATTTCTCATTGGAGGCTAAAGGGAAAGAAGGGTGTT
TGGATTAAGTTACCTATAGAACTCGCTCATCTTGTTAATGCAGCAGTAAAGGAGGGATTT
TGGTATCATCATGCAGAGGCAACATATTTGATGCTTGTTTATTGGATTCCTCATGAAATT
CCTCATACTTTTCCTGCTAATGCTTCTCATCGTATTGGTATTGGTGCTTTTGTCTTCAAC
CAAGACGGACAGGTACTGGTAGTTAAAGAGAAATCTGGAGATATGACTGGGACTTGGAAG
CTTCCTACTGGTGTTGTTGATGAGGGGGAGGATATATGTATGGCAGCCGTTAGAGAAGTG
CAAGAAGAGACAGGAATTGAAACAGAATTTGTTGAACTCCTTGCCTTTAGACAAAGTCAC
AAATCATTCTTTGGAAAGTCTGATTTGTTCTTCATATGCATGCTGAAACCACTTAATTTC
ACTATCAACAAGCAAGATGCTGAGATTGAGGAAGCTGAGTGGATGCCAATGGAAGAATAT
GCAAGTCAATCAAAGGTGAACCAAAGTGAACTCTCTAAAATGATAGCCAATATATGTGTA
GCCAAGAAAGAGGAACAGTACACTGGCTTCTCTGCTATTCTTACTACTACTGGACATTCT
GCCAAGAAGTGCTATTTATACTCTAATAACATATAG