Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400044803
CDS Infomation

pacid=37432353 polypeptide=PGSC0003DMP400030375 locus=PGSC0003DMG400017389 ID=PGSC0003DMT400044803.v4.03 annot-version=v4.03
Sequence

ATGTGGTGTCCCAAGAAACTCCAATTGCCTTCATTTTTGTCCTCTTTTTCTTCTACTTTG
GTTTTCTTGATTGTCATCCCTTTGGTTCTTGTTTTAGTCCTTGCTTGTACTTTAGGCCCT
CAGAGTTCTTATGTACTATCATTTAGTTCTTCTTCTTGGACATGGAGATCAGTTGGATTA
TTAAGGTCTTTGACAAGTTATGAAGAGAAAGATCAGCATTTGCAAGTAGTTGGCCTGGTT
ACTTTCAACAACTCAGCAAAAGTCTCATTTTCTAATCGACCCCTCGGAGAAGGAGTTGAA
GATATTTGGAAGGATGAAATGAATGAAGGAGAAGAGCATAGCGATGAAACAGCTGGAATA
GTTAAAAGGTATAACAGGTTGGAAAGGCTTGAGGCCATTTTAGCAAAAGCAAGGTCATCC
ATAAGAGAAGCTGCTAGAAATGGAAGCATGATATCGAATCATCAAGATCCTGATTATGTT
CCTCAAGGTCCTATTTATCGTAACACAAATGCCTTTCACAGGAGCTATCTTGAAATGGAA
AAGAAGTTCAAGATATATGTGTATGAGGAAGGTGAACTTCCAATATTCCATAATGGTCCA
TGTAGGAGTATATATTCAACAGAAGGAAGGTTCATTTATGAAATGGAAAAGGGAAATATG
TACAGAACAAAAGATCCAGAGGAGGCTTTAGTTTATTTCCTCCCATTTAGTGTGGTTGTA
ATGGTTAGATACCTATATGTCTCTGGTGGCCCTGACAGCAGGCATGTCATTGGTAGAACA
GTTGCTGATTATATTCATGTCATTTCTTCAAGACATTCCTTCTGGAATACAAGTCTTGGT
GCTGATCACTTCATGCTCTCCTGCCATGATTGGGGGCCACACACGACTTCATACGTGCCA
CATCTCTTCAACAATTCAATAAGAGTTCTATGCAATGCGAATACTACAGAAGGATTTAAT
CCTCAGAAAGATGTATCATTACCTGAAATCAATCTCAAGACGGATGATACAATAGGAATC
ATTGGAGGTCCATCGCCATCAAGACGATCAACTCTTGCTTTCTTTGCTGGTGGTTTACAT
GGTGCCATAAGGAACAACTTGATGCAGCAATGGAAAGGGAAAGACCAAGATGTTTTGGTT
TACGAAGAACTTCCACCAGGAAAATCCTATGAAACTATGTTGAAGAACAGCAAGTTTTGC
CTGTGCCCGAGTGGCTATGAGGTTGCAAGCCCAAGAGTTGTTGAAGCAATTTACGCGGAG
TGTGTTCCTGTGTTGATTTCAGATGGTTATGTGCCACCATTTAGTGATGTCTTGAACTGG
AATGCTTTTTCTGTGAAGGTGGCTGTGGAAGACATACCGAACATCAAGAAGATACTGATG
AGTATTTCTCAGACTCAGTATTTGAGAATGCAGAAGAGAGTGAAACAAGTTCAAAGGCAT
TTTGTGATGAATGGACCTCCAAAAAGATTTGATCTTTTTCACATGATTGTTCACTCTATT
TGGCTAAGAAGATTAAATATAAGAGTTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400030375
PEP Infomation

pacid=37432353 transcript=PGSC0003DMT400044803 locus=PGSC0003DMG400017389 ID=PGSC0003DMT400044803.v4.03 annot-version=v4.03
Sequence

MWCPKKLQLPSFLSSFSSTLVFLIVIPLVLVLVLACTLGPQSSYVLSFSSSSWTWRSVGL
LRSLTSYEEKDQHLQVVGLVTFNNSAKVSFSNRPLGEGVEDIWKDEMNEGEEHSDETAGI
VKRYNRLERLEAILAKARSSIREAARNGSMISNHQDPDYVPQGPIYRNTNAFHRSYLEME
KKFKIYVYEEGELPIFHNGPCRSIYSTEGRFIYEMEKGNMYRTKDPEEALVYFLPFSVVV
MVRYLYVSGGPDSRHVIGRTVADYIHVISSRHSFWNTSLGADHFMLSCHDWGPHTTSYVP
HLFNNSIRVLCNANTTEGFNPQKDVSLPEINLKTDDTIGIIGGPSPSRRSTLAFFAGGLH
GAIRNNLMQQWKGKDQDVLVYEELPPGKSYETMLKNSKFCLCPSGYEVASPRVVEAIYAE
CVPVLISDGYVPPFSDVLNWNAFSVKVAVEDIPNIKKILMSISQTQYLRMQKRVKQVQRH
FVMNGPPKRFDLFHMIVHSIWLRRLNIRV*

Transcript Sequence

Transcript ID

PGSC0003DMT400044803
Transcript Infomation

pacid=37432353 locus=PGSC0003DMG400017389 ID=PGSC0003DMT400044803.v4.03 annot-version=v4.03
Sequence

ATGTGGTGTCCCAAGAAACTCCAATTGCCTTCATTTTTGTCCTCTTTTTCTTCTACTTTG
GTTTTCTTGATTGTCATCCCTTTGGTTCTTGTTTTAGTCCTTGCTTGTACTTTAGGCCCT
CAGAGTTCTTATGTACTATCATTTAGTTCTTCTTCTTGGACATGGAGATCAGTTGGATTA
TTAAGGTCTTTGACAAGTTATGAAGAGAAAGATCAGCATTTGCAAGTAGTTGGCCTGGTT
ACTTTCAACAACTCAGCAAAAGTCTCATTTTCTAATCGACCCCTCGGAGAAGGAGTTGAA
GATATTTGGAAGGATGAAATGAATGAAGGAGAAGAGCATAGCGATGAAACAGCTGGAATA
GTTAAAAGGTATAACAGGTTGGAAAGGCTTGAGGCCATTTTAGCAAAAGCAAGGTCATCC
ATAAGAGAAGCTGCTAGAAATGGAAGCATGATATCGAATCATCAAGATCCTGATTATGTT
CCTCAAGGTCCTATTTATCGTAACACAAATGCCTTTCACAGGAGCTATCTTGAAATGGAA
AAGAAGTTCAAGATATATGTGTATGAGGAAGGTGAACTTCCAATATTCCATAATGGTCCA
TGTAGGAGTATATATTCAACAGAAGGAAGGTTCATTTATGAAATGGAAAAGGGAAATATG
TACAGAACAAAAGATCCAGAGGAGGCTTTAGTTTATTTCCTCCCATTTAGTGTGGTTGTA
ATGGTTAGATACCTATATGTCTCTGGTGGCCCTGACAGCAGGCATGTCATTGGTAGAACA
GTTGCTGATTATATTCATGTCATTTCTTCAAGACATTCCTTCTGGAATACAAGTCTTGGT
GCTGATCACTTCATGCTCTCCTGCCATGATTGGGGGCCACACACGACTTCATACGTGCCA
CATCTCTTCAACAATTCAATAAGAGTTCTATGCAATGCGAATACTACAGAAGGATTTAAT
CCTCAGAAAGATGTATCATTACCTGAAATCAATCTCAAGACGGATGATACAATAGGAATC
ATTGGAGGTCCATCGCCATCAAGACGATCAACTCTTGCTTTCTTTGCTGGTGGTTTACAT
GGTGCCATAAGGAACAACTTGATGCAGCAATGGAAAGGGAAAGACCAAGATGTTTTGGTT
TACGAAGAACTTCCACCAGGAAAATCCTATGAAACTATGTTGAAGAACAGCAAGTTTTGC
CTGTGCCCGAGTGGCTATGAGGTTGCAAGCCCAAGAGTTGTTGAAGCAATTTACGCGGAG
TGTGTTCCTGTGTTGATTTCAGATGGTTATGTGCCACCATTTAGTGATGTCTTGAACTGG
AATGCTTTTTCTGTGAAGGTGGCTGTGGAAGACATACCGAACATCAAGAAGATACTGATG
AGTATTTCTCAGACTCAGTATTTGAGAATGCAGAAGAGAGTGAAACAAGTTCAAAGGCAT
TTTGTGATGAATGGACCTCCAAAAAGATTTGATCTTTTTCACATGATTGTTCACTCTATT
TGGCTAAGAAGATTAAATATAAGAGTTTAG