Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400044723
CDS Infomation

pacid=37432952 polypeptide=PGSC0003DMP400030319 locus=PGSC0003DMG400017350 ID=PGSC0003DMT400044723.v4.03 annot-version=v4.03
Sequence

ATGTCTTCTGGGGACTTGAAAAGTGAATTGTCTAGGAAGACATCATTTTTGGGTCTCAAA
CTATGGGTTGTAATGGGCTTATGTGTTGGTGTATTTATTGTCGGGATACTATGTATGTTA
TCGATATGGGTAACGTGTAGGAGAAAATCTAGAAGAACGTTGGACGGGTATTCGCATTGT
CAAATACCCAATGTTTCCAAGGATATTAAGGTTGATAGAGTAGGTGCTGCGAATGTCCAT
GATCATCCTGAAAGCTTGTTTCTGACTATTCATGATAAATCAAATGAAACAACGTCGGAG
AAGATGTTAGTCCATTTGGGTAGGAGCAAATCAAGTGATGCTGATAACATCAGCCAATGT
AGTTCAATATATCATCATGAAAGGGGCTTTAGTTCACAGTCAGGGGAAGAGGGAAGTTCA
GGGACAGTGAGGAAACAACCATCTTATGGAATTGCAATGCCTTCTCCTTTGATTGGCTTG
CCAGAAGGCTCACAGCTCGGGTGGGGCCATTGGTTCACGCTTAGAGATCTTGAACTTGCA
ACAAATCGTTTCTCTGCCGAAAATGTGCTTGGTGAAGGTGGATATGGTGTGGTTTATAAA
GGAAGGTTGATCAATGGTACAGAAGTCGCTGTAAAGAAGCTCCTAAATAATCTTGGCCAA
GCTGAGAAAGAGTTTCGGGTTGAAGTAGAGGCAATTGGTCATGTTAGACACAAGAATCTA
GTGCGTCTTCTTGGTTATTGCATTGAAGGTGTTCACAGGATGCTGGTTTATGAGTATGTC
AATAATGGAAACTTGGAGCAGTGGCTGCATGGAGCTATGAGACATCACGGTACACTTACA
TGGGAAGCCCGTGTGAAGGTTCTCCTTGGTACTGCAAAAGCGCTTGCTTACTTGCATGAA
GCCATAGAACCTAAAGTAATCCACCGAGACATTAAGTCTAGTAATATCTTGATTGATGAC
GTGTTCAATGCCAAGGTCTCTGATTTTGGATTGGCAAAACTCTTAGACTCAGGAGAGAGC
CACATCACCACCAGAGTCATGGGCACATTTGGATACGTGGCTCCAGAATATGCTAATACT
GGATTGTTAAATGAGAAGAGCGATATTTACAGTTTTGGCGTTCTAGTGCTAGAAGCAGTG
ACTGGTAGAGATCCTGTGGACTACAGCCGTCCTGCTAATGAGGTTAATCTTGTTGAATGG
CTCAAAATGATGGTTGGAAATCGGAGGGCCGAGGAAGTTGTGGATTCTGACATTGAAGTT
AGGCCTAGTACTCGTGCTTTGAAACGGGCGCTTCTGGTTGCACTTAGATGTGTTGATCCT
GATTCAGAAAAACGACCCCGAATGAGCCAAGTAGTTAGAATGCTTGAAACTGAAGAAGTT
CCGTATCGCGAGGATCGACGAAACAGGAGAAGTAGAACAGCCAGCATGGAAATAGAATCA
GTAAAGGAAAGTTGCAGCAGCTCAGCTGATGTGGAAAGCAAGGTGGGGAGAGCAGATAGC
AGCACATTTGATACAATTCTTGGATAG

Peptide Sequence

PEP ID

PGSC0003DMP400030319
PEP Infomation

pacid=37432952 transcript=PGSC0003DMT400044723 locus=PGSC0003DMG400017350 ID=PGSC0003DMT400044723.v4.03 annot-version=v4.03
Sequence

MSSGDLKSELSRKTSFLGLKLWVVMGLCVGVFIVGILCMLSIWVTCRRKSRRTLDGYSHC
QIPNVSKDIKVDRVGAANVHDHPESLFLTIHDKSNETTSEKMLVHLGRSKSSDADNISQC
SSIYHHERGFSSQSGEEGSSGTVRKQPSYGIAMPSPLIGLPEGSQLGWGHWFTLRDLELA
TNRFSAENVLGEGGYGVVYKGRLINGTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNL
VRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRHHGTLTWEARVKVLLGTAKALAYLHE
AIEPKVIHRDIKSSNILIDDVFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANT
GLLNEKSDIYSFGVLVLEAVTGRDPVDYSRPANEVNLVEWLKMMVGNRRAEEVVDSDIEV
RPSTRALKRALLVALRCVDPDSEKRPRMSQVVRMLETEEVPYREDRRNRRSRTASMEIES
VKESCSSSADVESKVGRADSSTFDTILG*

Transcript Sequence

Transcript ID

PGSC0003DMT400044723
Transcript Infomation

pacid=37432952 locus=PGSC0003DMG400017350 ID=PGSC0003DMT400044723.v4.03 annot-version=v4.03
Sequence

ATGTCTTCTGGGGACTTGAAAAGTGAATTGTCTAGGAAGACATCATTTTTGGGTCTCAAA
CTATGGGTTGTAATGGGCTTATGTGTTGGTGTATTTATTGTCGGGATACTATGTATGTTA
TCGATATGGGTAACGTGTAGGAGAAAATCTAGAAGAACGTTGGACGGGTATTCGCATTGT
CAAATACCCAATGTTTCCAAGGATATTAAGGTTGATAGAGTAGGTGCTGCGAATGTCCAT
GATCATCCTGAAAGCTTGTTTCTGACTATTCATGATAAATCAAATGAAACAACGTCGGAG
AAGATGTTAGTCCATTTGGGTAGGAGCAAATCAAGTGATGCTGATAACATCAGCCAATGT
AGTTCAATATATCATCATGAAAGGGGCTTTAGTTCACAGTCAGGGGAAGAGGGAAGTTCA
GGGACAGTGAGGAAACAACCATCTTATGGAATTGCAATGCCTTCTCCTTTGATTGGCTTG
CCAGAAGGCTCACAGCTCGGGTGGGGCCATTGGTTCACGCTTAGAGATCTTGAACTTGCA
ACAAATCGTTTCTCTGCCGAAAATGTGCTTGGTGAAGGTGGATATGGTGTGGTTTATAAA
GGAAGGTTGATCAATGGTACAGAAGTCGCTGTAAAGAAGCTCCTAAATAATCTTGGCCAA
GCTGAGAAAGAGTTTCGGGTTGAAGTAGAGGCAATTGGTCATGTTAGACACAAGAATCTA
GTGCGTCTTCTTGGTTATTGCATTGAAGGTGTTCACAGGATGCTGGTTTATGAGTATGTC
AATAATGGAAACTTGGAGCAGTGGCTGCATGGAGCTATGAGACATCACGGTACACTTACA
TGGGAAGCCCGTGTGAAGGTTCTCCTTGGTACTGCAAAAGCGCTTGCTTACTTGCATGAA
GCCATAGAACCTAAAGTAATCCACCGAGACATTAAGTCTAGTAATATCTTGATTGATGAC
GTGTTCAATGCCAAGGTCTCTGATTTTGGATTGGCAAAACTCTTAGACTCAGGAGAGAGC
CACATCACCACCAGAGTCATGGGCACATTTGGATACGTGGCTCCAGAATATGCTAATACT
GGATTGTTAAATGAGAAGAGCGATATTTACAGTTTTGGCGTTCTAGTGCTAGAAGCAGTG
ACTGGTAGAGATCCTGTGGACTACAGCCGTCCTGCTAATGAGGTTAATCTTGTTGAATGG
CTCAAAATGATGGTTGGAAATCGGAGGGCCGAGGAAGTTGTGGATTCTGACATTGAAGTT
AGGCCTAGTACTCGTGCTTTGAAACGGGCGCTTCTGGTTGCACTTAGATGTGTTGATCCT
GATTCAGAAAAACGACCCCGAATGAGCCAAGTAGTTAGAATGCTTGAAACTGAAGAAGTT
CCGTATCGCGAGGATCGACGAAACAGGAGAAGTAGAACAGCCAGCATGGAAATAGAATCA
GTAAAGGAAAGTTGCAGCAGCTCAGCTGATGTGGAAAGCAAGGTGGGGAGAGCAGATAGC
AGCACATTTGATACAATTCTTGGATAG