Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400044716
CDS Infomation

pacid=37432267 polypeptide=PGSC0003DMP400030316 locus=PGSC0003DMG400017347 ID=PGSC0003DMT400044716.v4.03 annot-version=v4.03
Sequence

ATGAGTAGGAGGATTCTCAGGAGTTTTTACATATTCATCCAACTCTGTTGTCTTCTTATC
TGTTCAGGTTCAAATGCTACACACAACCCCAAGTCCATTTCCAGTAGCCAAAAGGACATA
ACAACTCCAATAACAACAGTTCCAACTGGAACTCCTCTCACCATTACTCCCACTACAACT
ACTCCAGTACTGAATCCAACAATCTCGGATCCCGATTCGACCTCTAACGGTCCTTCCAAT
CCGGTACTGACACCATCTGTAACCAATTCCCCAACATATTCATCAGGCTCAAGCAGCTGG
TGCGTCGCTAGTCAAGCTGCCTCACTAACAACCCTGCAGGTCGCTCTGGACTATGCTTGT
GGCTACGGTGGTGCTGATTGCTCTGCCATTCAGACTGGTGGCACCTGCTACAATCCCAAT
ACGCTACGCGCTCACGCGTCCTTTGCATTCAATAGTTACTATCAGAAAAATCCAATTCCT
AATAGCTGCAATTTTGCTGGTGCTGCTGTTACTACAAACACTGATCCTAGTAGTGGCTCA
TGTCAATATCCATCAACAAGCACAAGTGCATCCATTTTGAATACGACGAATTCAAGTGGT
TCAACAGTATTTGGCGCTGGGCCAATCACGCCTACTACTTCAGCAGCTGTATCTCCAACT
ATCTTCCTGAATTATCACCACCACATTTTAATTTGTCTCGCGATACTGCTAGCAGACTAT
CATAACATCCTCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400030316
PEP Infomation

pacid=37432267 transcript=PGSC0003DMT400044716 locus=PGSC0003DMG400017347 ID=PGSC0003DMT400044716.v4.03 annot-version=v4.03
Sequence

MSRRILRSFYIFIQLCCLLICSGSNATHNPKSISSSQKDITTPITTVPTGTPLTITPTTT
TPVLNPTISDPDSTSNGPSNPVLTPSVTNSPTYSSGSSSWCVASQAASLTTLQVALDYAC
GYGGADCSAIQTGGTCYNPNTLRAHASFAFNSYYQKNPIPNSCNFAGAAVTTNTDPSSGS
CQYPSTSTSASILNTTNSSGSTVFGAGPITPTTSAAVSPTIFLNYHHHILICLAILLADY
HNIL*

Transcript Sequence

Transcript ID

PGSC0003DMT400044716
Transcript Infomation

pacid=37432267 locus=PGSC0003DMG400017347 ID=PGSC0003DMT400044716.v4.03 annot-version=v4.03
Sequence

ATGAGTAGGAGGATTCTCAGGAGTTTTTACATATTCATCCAACTCTGTTGTCTTCTTATC
TGTTCAGGTTCAAATGCTACACACAACCCCAAGTCCATTTCCAGTAGCCAAAAGGACATA
ACAACTCCAATAACAACAGTTCCAACTGGAACTCCTCTCACCATTACTCCCACTACAACT
ACTCCAGTACTGAATCCAACAATCTCGGATCCCGATTCGACCTCTAACGGTCCTTCCAAT
CCGGTACTGACACCATCTGTAACCAATTCCCCAACATATTCATCAGGCTCAAGCAGCTGG
TGCGTCGCTAGTCAAGCTGCCTCACTAACAACCCTGCAGGTCGCTCTGGACTATGCTTGT
GGCTACGGTGGTGCTGATTGCTCTGCCATTCAGACTGGTGGCACCTGCTACAATCCCAAT
ACGCTACGCGCTCACGCGTCCTTTGCATTCAATAGTTACTATCAGAAAAATCCAATTCCT
AATAGCTGCAATTTTGCTGGTGCTGCTGTTACTACAAACACTGATCCTAGTAGTGGCTCA
TGTCAATATCCATCAACAAGCACAAGTGCATCCATTTTGAATACGACGAATTCAAGTGGT
TCAACAGTATTTGGCGCTGGGCCAATCACGCCTACTACTTCAGCAGCTGTATCTCCAACT
ATCTTCCTGAATTATCACCACCACATTTTAATTTGTCTCGCGATACTGCTAGCAGACTAT
CATAACATCCTCTGA