Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400044705
CDS Infomation

pacid=37431826 polypeptide=PGSC0003DMP400030306 locus=PGSC0003DMG400017341 ID=PGSC0003DMT400044705.v4.03 annot-version=v4.03
Sequence

ATGAAGTTTTACATATCGGCGACGGGGATTAAAAAACTGACTATATCGAGTTCCGCCGCT
GTTTCGAGCGGCAGAGGTGGCGTAGGATTGCCGATTGGTATGAAAGGGAAAGGATTACCG
CCGGTGACTCGCCGGATATCTCACCGGACGTTGTTATTGCCGGCCGTTTTGGTTCTCGGT
TTACTTTTAACCTTACTGTTTTTCAGAATTACCTTTATCATGCTCGAATCTGCCGCTTTT
TGCTCTTCCCCTATCGGTTGTCTAGGATGGAGAATTTTCGGCGGGAGTGACTCAACTCGG
CTCAGAGAAGAGTTGATGCGGGCATTGTTGGAGGCAACAAATGATGGTGACAATGGAATA
GAGAGGAGCTCAACTTCATTACCATCCTCATTCAATGATCTTGTGAAGGACATGACTTCA
AATGGACAAGACATCAAGGCTTTCGCTTTCAAAACTAAAGCTATGATAATGAAGATGGAG
CAAATGGTAGAATCAGCAAGGCAAAGTGAGTCTATTTTTTGGCACTTAGCTTCTCACGGT
GTACCAAAGGGCATACATTGCCTATCCCTCAAGTTAGCTGAAGAATATGCTGAAAATGCT
GCTGCACGTTCTCGCTTGCCTTCACCCCAATATATTTCCCACCTCATTGACCCTTCCTTC
CATCATGTAGTTCTTTTAACGGACAATGTCATTGCTGCATCTGTTGTAGTTTCCTCGACC
ATTAAAAGCTCAAGTATCCCAGAAAGATTGGTGTTTCATATAGTTACTGATAAGAAGACA
TACACTGCAATGCATGCATGGTTTGCTGTAAACTCTGTTAATTCGGCTTTCCTGGAAGTA
AGAGGATTGCATCAGTATGATTGGTCTCATGAGGTGAATATTGGGATTAAGGAGATGATA
GAGATTCATCGATTGATCTGTAGCCACAAGCTTGACAGCATGAAAATGGAAAATATTCCA
AACAAGTATGAACATGAAAAAGATTTGCAGCATCTACGGCCTAGCTGTACATCCCTCTTG
AATCATCTGCGCATCTATATCCCCGAGCTTTTCCCAGACCTGAACAAGATTGTATTTTTG
GACGATGATACTGTAGTACAGCATGATTTATCGTCTCTGTGGGAACTTGATCTCAATGGG
AAAGTTGTTGGTGCAGCTTTTGACTCGAGCTGTGGAGATGACTGTTGCCCTGGAAGAAAG
TACAAGGATTACTTTAATTTTACGAGTCCTATTATATCATCTAAGTTGGATTATGATCGT
TGCGGATGGCTTTATGGAATGAATGTCTTTGATCTCCAGGCTTGGAGGAAGACTAACATC
ACTGCAACTTACCATCACTGGCTTAAACTTAACCTGAACTCTGGTTTTGAATTGTGGAAT
CCTGGAGCACTTCCACCTTCTCTAATTGCTTTTGAGGGTCATGTGCACCGGATTGATCCT
TCATGGCACATTGCTGGTTTAGGTTATCGATCCATTATTAATGTTACACAATCTGTACTG
GAAGATGGAGCAGTTGTACATTTCAGTGGACCAGCCAAGCCATGGCTTGAGATTGGGGCC
CCTGAGATACGAAGCTTGTGGAGCCGCCATGTAAATATGTCAAATGAATTCATTAGGAAA
TGTGGAATCATGGAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400030306
PEP Infomation

pacid=37431826 transcript=PGSC0003DMT400044705 locus=PGSC0003DMG400017341 ID=PGSC0003DMT400044705.v4.03 annot-version=v4.03
Sequence

MKFYISATGIKKLTISSSAAVSSGRGGVGLPIGMKGKGLPPVTRRISHRTLLLPAVLVLG
LLLTLLFFRITFIMLESAAFCSSPIGCLGWRIFGGSDSTRLREELMRALLEATNDGDNGI
ERSSTSLPSSFNDLVKDMTSNGQDIKAFAFKTKAMIMKMEQMVESARQSESIFWHLASHG
VPKGIHCLSLKLAEEYAENAAARSRLPSPQYISHLIDPSFHHVVLLTDNVIAASVVVSST
IKSSSIPERLVFHIVTDKKTYTAMHAWFAVNSVNSAFLEVRGLHQYDWSHEVNIGIKEMI
EIHRLICSHKLDSMKMENIPNKYEHEKDLQHLRPSCTSLLNHLRIYIPELFPDLNKIVFL
DDDTVVQHDLSSLWELDLNGKVVGAAFDSSCGDDCCPGRKYKDYFNFTSPIISSKLDYDR
CGWLYGMNVFDLQAWRKTNITATYHHWLKLNLNSGFELWNPGALPPSLIAFEGHVHRIDP
SWHIAGLGYRSIINVTQSVLEDGAVVHFSGPAKPWLEIGAPEIRSLWSRHVNMSNEFIRK
CGIME*

Transcript Sequence

Transcript ID

PGSC0003DMT400044705
Transcript Infomation

pacid=37431826 locus=PGSC0003DMG400017341 ID=PGSC0003DMT400044705.v4.03 annot-version=v4.03
Sequence

ATGAAGTTTTACATATCGGCGACGGGGATTAAAAAACTGACTATATCGAGTTCCGCCGCT
GTTTCGAGCGGCAGAGGTGGCGTAGGATTGCCGATTGGTATGAAAGGGAAAGGATTACCG
CCGGTGACTCGCCGGATATCTCACCGGACGTTGTTATTGCCGGCCGTTTTGGTTCTCGGT
TTACTTTTAACCTTACTGTTTTTCAGAATTACCTTTATCATGCTCGAATCTGCCGCTTTT
TGCTCTTCCCCTATCGGTTGTCTAGGATGGAGAATTTTCGGCGGGAGTGACTCAACTCGG
CTCAGAGAAGAGTTGATGCGGGCATTGTTGGAGGCAACAAATGATGGTGACAATGGAATA
GAGAGGAGCTCAACTTCATTACCATCCTCATTCAATGATCTTGTGAAGGACATGACTTCA
AATGGACAAGACATCAAGGCTTTCGCTTTCAAAACTAAAGCTATGATAATGAAGATGGAG
CAAATGGTAGAATCAGCAAGGCAAAGTGAGTCTATTTTTTGGCACTTAGCTTCTCACGGT
GTACCAAAGGGCATACATTGCCTATCCCTCAAGTTAGCTGAAGAATATGCTGAAAATGCT
GCTGCACGTTCTCGCTTGCCTTCACCCCAATATATTTCCCACCTCATTGACCCTTCCTTC
CATCATGTAGTTCTTTTAACGGACAATGTCATTGCTGCATCTGTTGTAGTTTCCTCGACC
ATTAAAAGCTCAAGTATCCCAGAAAGATTGGTGTTTCATATAGTTACTGATAAGAAGACA
TACACTGCAATGCATGCATGGTTTGCTGTAAACTCTGTTAATTCGGCTTTCCTGGAAGTA
AGAGGATTGCATCAGTATGATTGGTCTCATGAGGTGAATATTGGGATTAAGGAGATGATA
GAGATTCATCGATTGATCTGTAGCCACAAGCTTGACAGCATGAAAATGGAAAATATTCCA
AACAAGTATGAACATGAAAAAGATTTGCAGCATCTACGGCCTAGCTGTACATCCCTCTTG
AATCATCTGCGCATCTATATCCCCGAGCTTTTCCCAGACCTGAACAAGATTGTATTTTTG
GACGATGATACTGTAGTACAGCATGATTTATCGTCTCTGTGGGAACTTGATCTCAATGGG
AAAGTTGTTGGTGCAGCTTTTGACTCGAGCTGTGGAGATGACTGTTGCCCTGGAAGAAAG
TACAAGGATTACTTTAATTTTACGAGTCCTATTATATCATCTAAGTTGGATTATGATCGT
TGCGGATGGCTTTATGGAATGAATGTCTTTGATCTCCAGGCTTGGAGGAAGACTAACATC
ACTGCAACTTACCATCACTGGCTTAAACTTAACCTGAACTCTGGTTTTGAATTGTGGAAT
CCTGGAGCACTTCCACCTTCTCTAATTGCTTTTGAGGGTCATGTGCACCGGATTGATCCT
TCATGGCACATTGCTGGTTTAGGTTATCGATCCATTATTAATGTTACACAATCTGTACTG
GAAGATGGAGCAGTTGTACATTTCAGTGGACCAGCCAAGCCATGGCTTGAGATTGGGGCC
CCTGAGATACGAAGCTTGTGGAGCCGCCATGTAAATATGTCAAATGAATTCATTAGGAAA
TGTGGAATCATGGAGTGA